RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 MAGEC2Q9UBF1 373 aaPredicted RBP17.06■□□□□ 0.32
BEST1-204ENST00000524926 CTDP1Q9Y5B0 961 aaPredicted RBP17.06■□□□□ 0.32
BEST1-204ENST00000524926 IGLV3-22A0A075B6J6 115 aa17.05■□□□□ 0.32
BEST1-204ENST00000524926 POTEFA5A3E0 1075 aa17.05■□□□□ 0.32
BEST1-204ENST00000524926 POTEIP0CG38 1075 aa17.05■□□□□ 0.32
BEST1-204ENST00000524926 COPB1P53618 953 aaKnown RBP17.05■□□□□ 0.32
BEST1-204ENST00000524926 USP14P54578 494 aa17.05■□□□□ 0.32
BEST1-204ENST00000524926 ANKRD40Q6AI12 368 aa17.05■□□□□ 0.32
BEST1-204ENST00000524926 POTEGQ6S5H5 508 aa17.05■□□□□ 0.32
BEST1-204ENST00000524926 POTEEQ6S8J3 1075 aa17.05■□□□□ 0.32
BEST1-204ENST00000524926 IRF2BP1Q8IU81 584 aa17.05■□□□□ 0.32
BEST1-204ENST00000524926 CCAR2Q8N163 923 aaKnown RBP17.05■□□□□ 0.32
BEST1-204ENST00000524926 EEF2KMTQ96G04 330 aa17.05■□□□□ 0.32
BEST1-204ENST00000524926 ZFP91Q96JP5 570 aaPredicted RBP17.05■□□□□ 0.32
BEST1-204ENST00000524926 THAP9Q9H5L6 903 aa17.05■□□□□ 0.32
BEST1-204ENST00000524926 RAVER2Q9HCJ3 691 aaKnown RBP17.05■□□□□ 0.32
BEST1-204ENST00000524926 ALAS1P13196 640 aa17.05■□□□□ 0.32
BEST1-204ENST00000524926 RPAP3Q9H6T3 665 aaPredicted RBP17.05■□□□□ 0.32
BEST1-204ENST00000524926 MEIS1O00470 390 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 SLC26A4O43511 780 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 HIRAP54198 1017 aaPredicted RBP17.04■□□□□ 0.32
BEST1-204ENST00000524926 PPFIBP1Q86W92 1011 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 CPLX3Q8WVH0 158 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 WDR18Q9BV38 432 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 FHDC1Q9C0D6 1143 aaPredicted RBP17.04■□□□□ 0.32
BEST1-204ENST00000524926 TMX1Q9H3N1 280 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 AS3MTQ9HBK9 375 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 HOMER2Q9NSB8 354 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 ZNF112Q9UJU3 913 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 PES1O00541 588 aaKnown RBP17.04■□□□□ 0.32
BEST1-204ENST00000524926 NFIBO00712 420 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 TNNT1P13805 278 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 PTPRAP18433 802 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 RPA1P27694 616 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 BACE1P56817 501 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 E4F1Q66K89 784 aaPredicted RBP17.04■□□□□ 0.32
BEST1-204ENST00000524926 GPBP1Q86WP2 473 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 TC2NQ8N9U0 490 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 NOC3LQ8WTT2 800 aaKnown RBP17.04■□□□□ 0.32
BEST1-204ENST00000524926 DNAJC19Q96DA6 116 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 DUSP9Q99956 384 aaKnown RBP17.04■□□□□ 0.32
BEST1-204ENST00000524926 SLC38A10Q9HBR0 1119 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 PANK4Q9NVE7 773 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 VAV3Q9UKW4 847 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 DNM3Q9UQ16 869 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 STK24Q9Y6E0 443 aa17.04■□□□□ 0.32
BEST1-204ENST00000524926 PBX1P40424 430 aa17.03■□□□□ 0.32
BEST1-204ENST00000524926 CYP4A11Q02928 519 aa17.03■□□□□ 0.32
BEST1-204ENST00000524926 PSMD2Q13200 908 aa17.03■□□□□ 0.32
BEST1-204ENST00000524926 CEP55Q53EZ4 464 aa17.03■□□□□ 0.32
BEST1-204ENST00000524926 COBLL1Q53SF7 1204 aa17.03■□□□□ 0.32
BEST1-204ENST00000524926 SLC30A10Q6XR72 485 aa17.03■□□□□ 0.32
BEST1-204ENST00000524926 ZNF280CQ8ND82 737 aa17.03■□□□□ 0.32
BEST1-204ENST00000524926 BAG1Q99933 345 aaPredicted RBP17.03■□□□□ 0.32
BEST1-204ENST00000524926 PPP1R9AQ9ULJ8 1098 aa17.03■□□□□ 0.32
BEST1-204ENST00000524926 ZHX2Q9Y6X8 837 aa17.03■□□□□ 0.32
BEST1-204ENST00000524926 AKR1B15C9JRZ8 316 aaPredicted RBP17.02■□□□□ 0.32
BEST1-204ENST00000524926 KRT18P05783 430 aaKnown RBP17.02■□□□□ 0.32
BEST1-204ENST00000524926 SPATA31C1P0DKV0 1188 aa17.02■□□□□ 0.32
BEST1-204ENST00000524926 EEF1GP26641 437 aaKnown RBP17.02■□□□□ 0.32
BEST1-204ENST00000524926 UBXN1Q04323 297 aa17.02■□□□□ 0.32
BEST1-204ENST00000524926 RBL2Q08999 1139 aa17.02■□□□□ 0.32
BEST1-204ENST00000524926 RAD51AP2Q09MP3 1159 aa17.02■□□□□ 0.32
BEST1-204ENST00000524926 LRCH2Q5VUJ6 765 aa17.02■□□□□ 0.32
BEST1-204ENST00000524926 MCF2L2Q86YR7 1114 aa17.02■□□□□ 0.32
BEST1-204ENST00000524926 NPHP3-ACAD11A0A0J9YXS1 232 aa17.02■□□□□ 0.32
BEST1-204ENST00000524926 DDNO94850 711 aaPredicted RBP17.02■□□□□ 0.32
BEST1-204ENST00000524926 HSD17B4P51659 736 aa17.02■□□□□ 0.32
BEST1-204ENST00000524926 PSMC6P62333 389 aa17.02■□□□□ 0.32
BEST1-204ENST00000524926 CACNB1Q02641 598 aaPredicted RBP17.02■□□□□ 0.32
BEST1-204ENST00000524926 COASYQ13057 564 aa17.02■□□□□ 0.32
BEST1-204ENST00000524926 PRKG1Q13976 671 aa17.02■□□□□ 0.32
BEST1-204ENST00000524926 CLEC4DQ8WXI8 215 aa17.02■□□□□ 0.32
BEST1-204ENST00000524926 SEMA6BQ9H3T3 888 aa17.02■□□□□ 0.32
BEST1-204ENST00000524926 EML1O00423 815 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 CHMP2AO43633 222 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 ZBED4O75132 1171 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 CYP11B2P19099 503 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 TERF1P54274 439 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 PABPC4Q13310 644 aaKnown RBP eCLIP17.01■□□□□ 0.31
BEST1-204ENST00000524926 LRRC41Q15345 812 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 PTPN14Q15678 1187 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 CENPPQ6IPU0 288 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 OTOP1Q7RTM1 612 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 CCDC65Q8IXS2 484 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 EIF2AK1Q9BQI3 630 aaKnown RBP17.01■□□□□ 0.31
BEST1-204ENST00000524926 TBC1D7Q9P0N9 293 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 KCNJ6P48051 423 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 SLC12A3P55017 1021 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 EHHADHQ08426 723 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 CEP135Q66GS9 1140 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 GUF1Q8N442 669 aaKnown RBP17.01■□□□□ 0.31
BEST1-204ENST00000524926 KLRG1Q96E93 195 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 ZNF577Q9BSK1 485 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 ZHX3Q9H4I2 956 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 KCND1Q9NSA2 647 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 RGL1Q9NZL6 768 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.01■□□□□ 0.31
BEST1-204ENST00000524926 COL20A1Q9P218 1284 aa17.01■□□□□ 0.31
BEST1-204ENST00000524926 DOCK1Q14185 1865 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms