RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 ZNF827Q17R98 1081 aa18.7■□□□□ 0.58
BEST1-203ENST00000524877 SLC9C1Q4G0N8 1177 aa18.7■□□□□ 0.58
BEST1-203ENST00000524877 CCDC84Q86UT8 332 aaPredicted RBP18.7■□□□□ 0.58
BEST1-203ENST00000524877 ENAHQ8N8S7 591 aaPredicted RBP18.7■□□□□ 0.58
BEST1-203ENST00000524877 DTNBO60941 627 aa18.7■□□□□ 0.58
BEST1-203ENST00000524877 LDHDQ86WU2 507 aa18.7■□□□□ 0.58
BEST1-203ENST00000524877 NLRP4Q96MN2 994 aa18.7■□□□□ 0.58
BEST1-203ENST00000524877 ARMCX3Q9UH62 379 aaPredicted RBP18.7■□□□□ 0.58
BEST1-203ENST00000524877 KIF13AQ9H1H9 1805 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 CSPG5O95196 566 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 SRGAP2CP0DJJ0 459 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 SURF1Q15526 300 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 CSRNP2Q9H175 543 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 ALDH1A1P00352 501 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 PFKFB3Q16875 520 aaPredicted RBP18.69■□□□□ 0.58
BEST1-203ENST00000524877 DAAM2Q86T65 1068 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 USP28Q96RU2 1077 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 PPP6R2O75170 966 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 DDNO94850 711 aaPredicted RBP18.69■□□□□ 0.58
BEST1-203ENST00000524877 ALCAMQ13740 583 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 SLFNL1Q499Z3 407 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 MIPOL1Q8TD10 442 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 KATNAL1Q9BW62 490 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 ST7Q9NRC1 585 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 TAB2Q9NYJ8 693 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 MEIS1O00470 390 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 SKILP12757 684 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 CYP2B6P20813 491 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 PHKA2P46019 1235 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 NFX1Q12986 1120 aaKnown RBP18.69■□□□□ 0.58
BEST1-203ENST00000524877 KARSQ15046 597 aaKnown RBP18.69■□□□□ 0.58
BEST1-203ENST00000524877 QRICH1Q2TAL8 776 aa18.69■□□□□ 0.58
BEST1-203ENST00000524877 USP50Q70EL3 339 aaPredicted RBP18.69■□□□□ 0.58
BEST1-203ENST00000524877 ELF1P32519 619 aa18.68■□□□□ 0.58
BEST1-203ENST00000524877 ZBTB33Q86T24 672 aa18.68■□□□□ 0.58
BEST1-203ENST00000524877 PAXBP1Q9Y5B6 917 aa18.68■□□□□ 0.58
BEST1-203ENST00000524877 LSM14BQ9BX40 385 aaKnown RBP18.68■□□□□ 0.58
BEST1-203ENST00000524877 PXDNQ92626 1479 aa18.68■□□□□ 0.58
BEST1-203ENST00000524877 PFASO15067 1338 aa18.68■□□□□ 0.58
BEST1-203ENST00000524877 CYB5R4Q7L1T6 521 aa18.68■□□□□ 0.58
BEST1-203ENST00000524877 CLIC4Q9Y696 253 aa18.68■□□□□ 0.58
BEST1-203ENST00000524877 GABPB1Q06547 395 aaPredicted RBP18.68■□□□□ 0.58
BEST1-203ENST00000524877 SFMBT2Q5VUG0 894 aa18.68■□□□□ 0.58
BEST1-203ENST00000524877 CCDC127Q96BQ5 260 aa18.68■□□□□ 0.58
BEST1-203ENST00000524877 CCDC114Q96M63 670 aa18.68■□□□□ 0.58
BEST1-203ENST00000524877 ADAM9Q13443 819 aa18.68■□□□□ 0.58
BEST1-203ENST00000524877 NECTIN1Q15223 517 aa18.68■□□□□ 0.58
BEST1-203ENST00000524877 SLC39A2Q9NP94 309 aa18.68■□□□□ 0.58
BEST1-203ENST00000524877 MYO1EQ12965 1108 aa18.67■□□□□ 0.58
BEST1-203ENST00000524877 BIRC2Q13490 618 aa18.67■□□□□ 0.58
BEST1-203ENST00000524877 CTTNQ14247 550 aaKnown RBP18.67■□□□□ 0.58
BEST1-203ENST00000524877 CFAP58Q5T655 872 aa18.67■□□□□ 0.58
BEST1-203ENST00000524877 ARPP19P56211 112 aa18.67■□□□□ 0.58
BEST1-203ENST00000524877 CXCL9Q07325 125 aa18.67■□□□□ 0.58
BEST1-203ENST00000524877 C16orf86Q6ZW13 317 aa18.67■□□□□ 0.58
BEST1-203ENST00000524877 GPR75-ASB3A0A0A6YYF3 556 aa18.67■□□□□ 0.58
BEST1-203ENST00000524877 LACTBP83111 547 aaPredicted RBP18.67■□□□□ 0.58
BEST1-203ENST00000524877 VCPKMTQ9H867 229 aa18.67■□□□□ 0.58
BEST1-203ENST00000524877 RPF1Q9H9Y2 349 aaKnown RBP18.67■□□□□ 0.58
BEST1-203ENST00000524877 CYP26C1Q6V0L0 522 aa18.67■□□□□ 0.58
BEST1-203ENST00000524877 ERO1BQ86YB8 467 aa18.67■□□□□ 0.58
BEST1-203ENST00000524877 E7EVH7 732 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 TFRCP02786 760 aaKnown RBP18.66■□□□□ 0.58
BEST1-203ENST00000524877 ERCC3P19447 782 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 TNFAIP2Q03169 654 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 UBL4BQ8N7F7 174 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 C16orf45Q96MC5 204 aaPredicted RBP18.66■□□□□ 0.58
BEST1-203ENST00000524877 FAM204AQ9H8W3 233 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 RARBP10826 455 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 ANXA13P27216 316 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 CLNS1AP54105 237 aaKnown RBP18.66■□□□□ 0.58
BEST1-203ENST00000524877 KRBA2Q6ZNG9 492 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 GUCA1BQ9UMX6 200 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 RGS2P41220 211 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 CLIC6Q96NY7 704 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 MTMR4Q9NYA4 1195 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 CTTNBP2NLQ9P2B4 639 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 CTAGE9A4FU28 777 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 SPDYE2BA6NHP3 402 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 SPDYE6P0CI01 402 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 ATP2A2P16615 1042 aaKnown RBP18.66■□□□□ 0.58
BEST1-203ENST00000524877 TRIML1Q8N9V2 468 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 NEK9Q8TD19 979 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 TXNP10599 105 aaKnown RBP18.66■□□□□ 0.58
BEST1-203ENST00000524877 SLFN12LQ6IEE8 588 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 CHST13Q8NET6 341 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 KIAA1524Q8TCG1 905 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 PARVGQ9HBI0 331 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 MTMR6Q9Y217 621 aa18.66■□□□□ 0.58
BEST1-203ENST00000524877 TYW5A2RUC4 315 aaKnown RBP18.65■□□□□ 0.58
BEST1-203ENST00000524877 OATP04181 439 aa18.65■□□□□ 0.58
BEST1-203ENST00000524877 PDE6CP51160 858 aa18.65■□□□□ 0.58
BEST1-203ENST00000524877 KCNJ6P48051 423 aa18.65■□□□□ 0.58
BEST1-203ENST00000524877 KIF23Q02241 960 aaPredicted RBP18.65■□□□□ 0.58
BEST1-203ENST00000524877 KLHL30Q0D2K2 578 aa18.65■□□□□ 0.58
BEST1-203ENST00000524877 STK36Q9NRP7 1315 aa18.65■□□□□ 0.58
BEST1-203ENST00000524877 KIF11P52732 1056 aa18.65■□□□□ 0.58
BEST1-203ENST00000524877 PPP1R7Q15435 360 aa18.65■□□□□ 0.58
BEST1-203ENST00000524877 CCDC186Q7Z3E2 898 aa18.65■□□□□ 0.58
BEST1-203ENST00000524877 FAM169AQ9Y6X4 670 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms