RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 RNF40O75150 1001 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 PRPF6O94906 941 aaKnown RBP9.88□□□□□ -0.83
PKP3-202ENST00000524646 MOCS3O95396 460 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 TTLL1O95922 423 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 PRLRP16471 622 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 TNFRSF8P28908 595 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 HOXA10P31260 410 aaPredicted RBP9.88□□□□□ -0.83
PKP3-202ENST00000524646 RAD51AP2Q09MP3 1159 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 UBE2SQ16763 222 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 CCDC40Q4G0X9 1142 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 GPATCH4Q5T3I0 446 aaKnown RBP9.88□□□□□ -0.83
PKP3-202ENST00000524646 FAM196AQ6ZSG2 479 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 KRT26Q7Z3Y9 468 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 KCNK18Q7Z418 384 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 ZC3H3Q8IXZ2 948 aaKnown RBP9.88□□□□□ -0.83
PKP3-202ENST00000524646 GOLGA6L1Q8N7Z2 621 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 AFAP1L1Q8TED9 768 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 COG1Q8WTW3 980 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 DDX12PQ92771 950 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 SYN2Q92777 582 aaPredicted RBP9.88□□□□□ -0.83
PKP3-202ENST00000524646 DNAJC19Q96DA6 116 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 MTMR8Q96EF0 704 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 EEF2KMTQ96G04 330 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 CRAMP1Q96RY5 1269 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 CRACR2AQ9BSW2 395 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 SELENOOQ9BVL4 669 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 NT5C3AQ9H0P0 336 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 GLT8D2Q9H1C3 349 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 NUCKS1Q9H1E3 243 aaKnown RBP9.88□□□□□ -0.83
PKP3-202ENST00000524646 MMRN2Q9H8L6 949 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 JMJD4Q9H9V9 463 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 GPCPD1Q9NPB8 672 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 JADE2Q9NQC1 790 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 COL4A3BPQ9Y5P4 624 aa9.88□□□□□ -0.83
PKP3-202ENST00000524646 A0A0U1RQG5 324 aaPredicted RBP9.87□□□□□ -0.83
PKP3-202ENST00000524646 ZNF185O15231 689 aa9.87□□□□□ -0.83
PKP3-202ENST00000524646 PPP1R11O60927 126 aaPredicted RBP9.87□□□□□ -0.83
PKP3-202ENST00000524646 BBOX1O75936 387 aa9.87□□□□□ -0.83
PKP3-202ENST00000524646 GNA14O95837 355 aa9.87□□□□□ -0.83
PKP3-202ENST00000524646 CAPN2P17655 700 aa9.87□□□□□ -0.83
PKP3-202ENST00000524646 SHMT1P34896 483 aa9.87□□□□□ -0.83
PKP3-202ENST00000524646 MAGEA1P43355 309 aa9.87□□□□□ -0.83
PKP3-202ENST00000524646 MARSP56192 900 aaKnown RBP9.87□□□□□ -0.83
PKP3-202ENST00000524646 RRAGAQ7L523 313 aa9.87□□□□□ -0.83
PKP3-202ENST00000524646 CACNA2D4Q7Z3S7 1137 aa9.87□□□□□ -0.83
PKP3-202ENST00000524646 CREG2Q8IUH2 290 aa9.87□□□□□ -0.83
PKP3-202ENST00000524646 CLEC10AQ8IUN9 316 aa9.87□□□□□ -0.83
PKP3-202ENST00000524646 CCDC65Q8IXS2 484 aa9.87□□□□□ -0.83
PKP3-202ENST00000524646 GSPT2Q8IYD1 628 aaKnown RBP9.87□□□□□ -0.83
PKP3-202ENST00000524646 SMCR8Q8TEV9 937 aaPredicted RBP9.87□□□□□ -0.83
PKP3-202ENST00000524646 NGLY1Q96IV0 654 aa9.87□□□□□ -0.83
PKP3-202ENST00000524646 OSBPL9Q96SU4 736 aa9.87□□□□□ -0.83
PKP3-202ENST00000524646 NUDT12Q9BQG2 462 aa9.87□□□□□ -0.83
PKP3-202ENST00000524646 LSM14BQ9BX40 385 aaKnown RBP9.87□□□□□ -0.83
PKP3-202ENST00000524646 FAM204AQ9H8W3 233 aa9.87□□□□□ -0.83
PKP3-202ENST00000524646 LUC7LQ9NQ29 371 aaKnown RBP9.87□□□□□ -0.83
PKP3-202ENST00000524646 FAM184BQ9ULE4 1060 aa9.87□□□□□ -0.83
PKP3-202ENST00000524646 ATP8B3O60423 1300 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.86□□□□□ -0.83
PKP3-202ENST00000524646 PPEF1O14829 653 aaPredicted RBP9.86□□□□□ -0.83
PKP3-202ENST00000524646 CLSTN1O94985 981 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 SERPINB2P05120 415 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 SERPING1P05155 500 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 HLA-DOAP06340 250 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 MYBL2P10244 700 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 GYS1P13807 737 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 SLC1A4P43007 532 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 MRPL12P52815 198 aaKnown RBP9.86□□□□□ -0.83
PKP3-202ENST00000524646 FKBP3Q00688 224 aaKnown RBP9.86□□□□□ -0.83
PKP3-202ENST00000524646 PICALMQ13492 652 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 ASTE1Q2TB18 679 aaPredicted RBP9.86□□□□□ -0.83
PKP3-202ENST00000524646 TDRD12Q587J7 1177 aaKnown RBP9.86□□□□□ -0.83
PKP3-202ENST00000524646 SFMBT2Q5VUG0 894 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 HGSNATQ68CP4 663 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 HAUS3Q68CZ6 603 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 MOXD1Q6UVY6 613 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 CCNI2Q6ZMN8 369 aaPredicted RBP9.86□□□□□ -0.83
PKP3-202ENST00000524646 PPP4R3CPQ6ZMV5 832 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 TRIM59Q8IWR1 403 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 ADGRF4Q8IZF3 695 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 RNF10Q8N5U6 811 aaKnown RBP9.86□□□□□ -0.83
PKP3-202ENST00000524646 GLIS3Q8NEA6 775 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 HAS1Q92839 578 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 DRC1Q96MC2 740 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 MBOAT7Q96N66 472 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 NOX5Q96PH1 765 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 TANGO6Q9C0B7 1094 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 COA1Q9GZY4 146 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 EHD4Q9H223 541 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 PANK4Q9NVE7 773 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 POLLQ9UGP5 575 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 SERPINB13Q9UIV8 391 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 ATF5Q9Y2D1 282 aaPredicted RBP9.86□□□□□ -0.83
PKP3-202ENST00000524646 DUSP10Q9Y6W6 482 aa9.86□□□□□ -0.83
PKP3-202ENST00000524646 FRMD3A2A2Y4 597 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 C6orf229H3BNL8 230 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 ZBTB5O15062 677 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 MARCH6O60337 910 aa9.85□□□□□ -0.83
PKP3-202ENST00000524646 SYF2O95926 243 aaKnown RBP9.85□□□□□ -0.83
PKP3-202ENST00000524646 EPHB4P54760 987 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms