RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ZNF318Q5VUA4 2279 aa13.65□□□□□ -0.22
SDCBP-211ENST00000523441 DOCK5Q9H7D0 1870 aa13.64□□□□□ -0.23
SDCBP-211ENST00000523441 FOXP2O15409 715 aa13.64□□□□□ -0.23
SDCBP-211ENST00000523441 MYCLP12524 364 aaPredicted RBP13.64□□□□□ -0.23
SDCBP-211ENST00000523441 CTNNB1P35222 781 aa13.64□□□□□ -0.23
SDCBP-211ENST00000523441 DLX2Q07687 328 aaPredicted RBP13.64□□□□□ -0.23
SDCBP-211ENST00000523441 STXBP2Q15833 593 aa13.64□□□□□ -0.23
SDCBP-211ENST00000523441 TRIM71Q2Q1W2 868 aaKnown RBP13.64□□□□□ -0.23
SDCBP-211ENST00000523441 IER5LQ5T953 404 aa13.64□□□□□ -0.23
SDCBP-211ENST00000523441 C20orf194Q5TEA3 1177 aa13.64□□□□□ -0.23
SDCBP-211ENST00000523441 ARHGEF16Q5VV41 709 aa13.64□□□□□ -0.23
SDCBP-211ENST00000523441 PRSS33Q8NF86 280 aa13.64□□□□□ -0.23
SDCBP-211ENST00000523441 RMDN3Q96TC7 470 aa13.64□□□□□ -0.23
SDCBP-211ENST00000523441 KATNAL1Q9BW62 490 aa13.64□□□□□ -0.23
SDCBP-211ENST00000523441 IFIH1Q9BYX4 1025 aaKnown RBP13.64□□□□□ -0.23
SDCBP-211ENST00000523441 UPF3BQ9BZI7 483 aaKnown RBP13.64□□□□□ -0.23
SDCBP-211ENST00000523441 H3BNC9 293 aa13.63□□□□□ -0.23
SDCBP-211ENST00000523441 LINC01565O15544 149 aa13.63□□□□□ -0.23
SDCBP-211ENST00000523441 GTF2F1P35269 517 aaKnown RBP eCLIP13.63□□□□□ -0.23
SDCBP-211ENST00000523441 HTRA4P83105 476 aaPredicted RBP13.63□□□□□ -0.23
SDCBP-211ENST00000523441 ZNF543Q08ER8 600 aa13.63□□□□□ -0.23
SDCBP-211ENST00000523441 FBXO11Q86XK2 927 aa13.63□□□□□ -0.23
SDCBP-211ENST00000523441 RNF135Q8IUD6 432 aa13.63□□□□□ -0.23
SDCBP-211ENST00000523441 MIER1Q8N108 512 aa13.63□□□□□ -0.23
SDCBP-211ENST00000523441 SYTL5Q8TDW5 730 aaPredicted RBP13.63□□□□□ -0.23
SDCBP-211ENST00000523441 NSUN6Q8TEA1 469 aaKnown RBP13.63□□□□□ -0.23
SDCBP-211ENST00000523441 VAT1LQ9HCJ6 419 aa13.63□□□□□ -0.23
SDCBP-211ENST00000523441 DDX41Q9UJV9 622 aaKnown RBP13.63□□□□□ -0.23
SDCBP-211ENST00000523441 CFBP00751 764 aa13.62□□□□□ -0.23
SDCBP-211ENST00000523441 LTBRP36941 435 aa13.62□□□□□ -0.23
SDCBP-211ENST00000523441 RBL2Q08999 1139 aa13.62□□□□□ -0.23
SDCBP-211ENST00000523441 MKRN4PQ13434 485 aaPredicted RBP13.62□□□□□ -0.23
SDCBP-211ENST00000523441 CDC37Q16543 378 aaPredicted RBP13.62□□□□□ -0.23
SDCBP-211ENST00000523441 SP7Q8TDD2 431 aaPredicted RBP13.62□□□□□ -0.23
SDCBP-211ENST00000523441 SEPT8Q92599 483 aa13.62□□□□□ -0.23
SDCBP-211ENST00000523441 ATP6V0A1Q93050 837 aa13.62□□□□□ -0.23
SDCBP-211ENST00000523441 PBXIP1Q96AQ6 731 aa13.62□□□□□ -0.23
SDCBP-211ENST00000523441 SAMD11Q96NU1 681 aa13.62□□□□□ -0.23
SDCBP-211ENST00000523441 CHMP4BQ9H444 224 aaKnown RBP13.62□□□□□ -0.23
SDCBP-211ENST00000523441 PRKAG3Q9UGI9 489 aa13.62□□□□□ -0.23
SDCBP-211ENST00000523441 EMSYQ7Z589 1322 aa13.62□□□□□ -0.23
SDCBP-211ENST00000523441 C17orf102A2RUQ5 167 aa13.61□□□□□ -0.23
SDCBP-211ENST00000523441 C19orf67A6NJJ6 358 aa13.61□□□□□ -0.23
SDCBP-211ENST00000523441 STXBP3O00186 592 aa13.61□□□□□ -0.23
SDCBP-211ENST00000523441 GRM6O15303 877 aa13.61□□□□□ -0.23
SDCBP-211ENST00000523441 MBTPS2O43462 519 aa13.61□□□□□ -0.23
SDCBP-211ENST00000523441 ORC4O43929 436 aa13.61□□□□□ -0.23
SDCBP-211ENST00000523441 F2P00734 622 aa13.61□□□□□ -0.23
SDCBP-211ENST00000523441 IBSPP21815 317 aaPredicted RBP13.61□□□□□ -0.23
SDCBP-211ENST00000523441 HYAL1Q12794 435 aa13.61□□□□□ -0.23
SDCBP-211ENST00000523441 LAMC2Q13753 1193 aa13.61□□□□□ -0.23
SDCBP-211ENST00000523441 PLEKHG4Q58EX7 1191 aa13.61□□□□□ -0.23
SDCBP-211ENST00000523441 FIBCD1Q8N539 461 aa13.61□□□□□ -0.23
SDCBP-211ENST00000523441 SPATA33Q96N06 139 aa13.61□□□□□ -0.23
SDCBP-211ENST00000523441 KCNH6Q9H252 994 aa13.61□□□□□ -0.23
SDCBP-211ENST00000523441 WDR19Q8NEZ3 1342 aa13.61□□□□□ -0.23
SDCBP-211ENST00000523441 TREHO43280 583 aa13.6□□□□□ -0.23
SDCBP-211ENST00000523441 TECTAO75443 2155 aa13.6□□□□□ -0.23
SDCBP-211ENST00000523441 GGPS1O95749 300 aa13.6□□□□□ -0.23
SDCBP-211ENST00000523441 NDUFV1P49821 464 aa13.6□□□□□ -0.23
SDCBP-211ENST00000523441 SUGP1Q8IWZ8 645 aaKnown RBP13.6□□□□□ -0.23
SDCBP-211ENST00000523441 PPTC7Q8NI37 304 aa13.6□□□□□ -0.23
SDCBP-211ENST00000523441 PI4K2BQ8TCG2 481 aa13.6□□□□□ -0.23
SDCBP-211ENST00000523441 TOP1MTQ969P6 601 aa13.6□□□□□ -0.23
SDCBP-211ENST00000523441 ANAPC4Q9UJX5 808 aa13.6□□□□□ -0.23
SDCBP-211ENST00000523441 PNMA2Q9UL42 364 aa13.6□□□□□ -0.23
SDCBP-211ENST00000523441 ABCB11O95342 1321 aa13.6□□□□□ -0.23
SDCBP-211ENST00000523441 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.59□□□□□ -0.23
SDCBP-211ENST00000523441 TMEM221A6NGB7 291 aa13.59□□□□□ -0.23
SDCBP-211ENST00000523441 M0R296 226 aa13.59□□□□□ -0.23
SDCBP-211ENST00000523441 HAS3O00219 553 aa13.59□□□□□ -0.23
SDCBP-211ENST00000523441 TBX10O75333 385 aa13.59□□□□□ -0.23
SDCBP-211ENST00000523441 NR3C2P08235 984 aa13.59□□□□□ -0.23
SDCBP-211ENST00000523441 SMAD2Q15796 467 aaKnown RBP13.59□□□□□ -0.23
SDCBP-211ENST00000523441 HSDL1Q3SXM5 330 aa13.59□□□□□ -0.23
SDCBP-211ENST00000523441 SERINC5Q86VE9 423 aa13.59□□□□□ -0.23
SDCBP-211ENST00000523441 ADGRF4Q8IZF3 695 aa13.59□□□□□ -0.23
SDCBP-211ENST00000523441 IL17RAQ96F46 866 aa13.59□□□□□ -0.23
SDCBP-211ENST00000523441 POP1Q99575 1024 aaKnown RBP13.59□□□□□ -0.23
SDCBP-211ENST00000523441 ALG13Q9NP73 1137 aaKnown RBP13.59□□□□□ -0.23
SDCBP-211ENST00000523441 PXMP2Q9NR77 195 aa13.59□□□□□ -0.23
SDCBP-211ENST00000523441 SUPT16HQ9Y5B9 1047 aaKnown RBP13.59□□□□□ -0.23
SDCBP-211ENST00000523441 KIAA1671Q9BY89 1806 aa13.59□□□□□ -0.23
SDCBP-211ENST00000523441 KMT2EQ8IZD2 1858 aa13.59□□□□□ -0.23
SDCBP-211ENST00000523441 EIF3JO75822 258 aaKnown RBP13.58□□□□□ -0.24
SDCBP-211ENST00000523441 FGAP02671 866 aa13.58□□□□□ -0.24
SDCBP-211ENST00000523441 SMIM10L2AP0DMW4 78 aa13.58□□□□□ -0.24
SDCBP-211ENST00000523441 SMIM10L2BP0DMW5 78 aa13.58□□□□□ -0.24
SDCBP-211ENST00000523441 NOVP48745 357 aa13.58□□□□□ -0.24
SDCBP-211ENST00000523441 PTPN5P54829 565 aa13.58□□□□□ -0.24
SDCBP-211ENST00000523441 SP4Q02446 784 aa13.58□□□□□ -0.24
SDCBP-211ENST00000523441 QRICH1Q2TAL8 776 aa13.58□□□□□ -0.24
SDCBP-211ENST00000523441 HERC4Q5GLZ8 1057 aaPredicted RBP13.58□□□□□ -0.24
SDCBP-211ENST00000523441 MCF2L2Q86YR7 1114 aa13.58□□□□□ -0.24
SDCBP-211ENST00000523441 EDAQ92838 391 aa13.58□□□□□ -0.24
SDCBP-211ENST00000523441 GPKOWQ92917 476 aaPredicted RBP eCLIP13.58□□□□□ -0.24
SDCBP-211ENST00000523441 FAM227BQ96M60 508 aa13.58□□□□□ -0.24
SDCBP-211ENST00000523441 IWS1Q96ST2 819 aa13.58□□□□□ -0.24
SDCBP-211ENST00000523441 DCTPP1Q9H773 170 aa13.58□□□□□ -0.24
SDCBP-211ENST00000523441 MLXIPQ9HAP2 919 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms