RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 MAP4K2Q12851 820 aa6.35□□□□□ -1.39
CLK4-213ENST00000523013 ADAM9Q13443 819 aa6.35□□□□□ -1.39
CLK4-213ENST00000523013 EMC4Q5J8M3 183 aa6.35□□□□□ -1.39
CLK4-213ENST00000523013 TTLL6Q8N841 843 aa6.35□□□□□ -1.39
CLK4-213ENST00000523013 SLC43A3Q8NBI5 491 aa6.35□□□□□ -1.39
CLK4-213ENST00000523013 ARRDC4Q8NCT1 418 aa6.35□□□□□ -1.39
CLK4-213ENST00000523013 ST7Q9NRC1 585 aa6.35□□□□□ -1.39
CLK4-213ENST00000523013 CLDND1Q9NY35 253 aa6.35□□□□□ -1.39
CLK4-213ENST00000523013 JAG2Q9Y219 1238 aa6.35□□□□□ -1.39
CLK4-213ENST00000523013 COA3Q9Y2R0 106 aaPredicted RBP6.35□□□□□ -1.39
CLK4-213ENST00000523013 TCRBV5S2A0A599 114 aa6.34□□□□□ -1.39
CLK4-213ENST00000523013 AGRPO00253 132 aa6.34□□□□□ -1.39
CLK4-213ENST00000523013 HGSO14964 777 aaPredicted RBP6.34□□□□□ -1.39
CLK4-213ENST00000523013 DLX3O60479 287 aa6.34□□□□□ -1.39
CLK4-213ENST00000523013 DDR2Q16832 855 aa6.34□□□□□ -1.39
CLK4-213ENST00000523013 RGL3Q3MIN7 710 aa6.34□□□□□ -1.39
CLK4-213ENST00000523013 STEAP3Q658P3 488 aa6.34□□□□□ -1.39
CLK4-213ENST00000523013 ANKS3Q6ZW76 656 aa6.34□□□□□ -1.39
CLK4-213ENST00000523013 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.34□□□□□ -1.39
CLK4-213ENST00000523013 CHAMP1Q96JM3 812 aa6.34□□□□□ -1.39
CLK4-213ENST00000523013 CNOT11Q9UKZ1 510 aaKnown RBP6.34□□□□□ -1.39
CLK4-213ENST00000523013 MSCO60682 206 aa6.33□□□□□ -1.4
CLK4-213ENST00000523013 ADRB1P08588 477 aa6.33□□□□□ -1.4
CLK4-213ENST00000523013 CHRNA2Q15822 529 aa6.33□□□□□ -1.4
CLK4-213ENST00000523013 SPATS1Q496A3 300 aa6.33□□□□□ -1.4
CLK4-213ENST00000523013 FAM26FQ5R3K3 315 aa6.33□□□□□ -1.4
CLK4-213ENST00000523013 KCTD13Q8WZ19 329 aa6.33□□□□□ -1.4
CLK4-213ENST00000523013 RBM15Q96T37 977 aaKnown RBP eCLIP6.33□□□□□ -1.4
CLK4-213ENST00000523013 IER2Q9BTL4 223 aa6.33□□□□□ -1.4
CLK4-213ENST00000523013 EPB41L1Q9H4G0 881 aa6.33□□□□□ -1.4
CLK4-213ENST00000523013 NGRNQ9NPE2 291 aaKnown RBP6.33□□□□□ -1.4
CLK4-213ENST00000523013 IGSF5Q9NSI5 407 aa6.33□□□□□ -1.4
CLK4-213ENST00000523013 DTLQ9NZJ0 730 aa6.33□□□□□ -1.4
CLK4-213ENST00000523013 PCDHB4Q9Y5E5 795 aa6.33□□□□□ -1.4
CLK4-213ENST00000523013 K7ESM1 405 aa6.32□□□□□ -1.4
CLK4-213ENST00000523013 NKX3-2P78367 333 aa6.32□□□□□ -1.4
CLK4-213ENST00000523013 TEPPQ6URK8 271 aa6.32□□□□□ -1.4
CLK4-213ENST00000523013 HHIPL2Q6UWX4 724 aa6.32□□□□□ -1.4
CLK4-213ENST00000523013 GGNQ86UU5 652 aa6.32□□□□□ -1.4
CLK4-213ENST00000523013 TXNDC5Q8NBS9 432 aaKnown RBP6.32□□□□□ -1.4
CLK4-213ENST00000523013 TOE1Q96GM8 510 aaKnown RBP6.32□□□□□ -1.4
CLK4-213ENST00000523013 YIPF4Q9BSR8 244 aa6.32□□□□□ -1.4
CLK4-213ENST00000523013 GPR27Q9NS67 375 aa6.32□□□□□ -1.4
CLK4-213ENST00000523013 PPARGC1AQ9UBK2 798 aaKnown RBP6.32□□□□□ -1.4
CLK4-213ENST00000523013 R3HCC1Q9Y3T6 440 aaKnown RBP6.32□□□□□ -1.4
CLK4-213ENST00000523013 DDX3XO00571 662 aaKnown RBP eCLIP6.31□□□□□ -1.4
CLK4-213ENST00000523013 DGKIO75912 1065 aa6.31□□□□□ -1.4
CLK4-213ENST00000523013 LRG1P02750 347 aa6.31□□□□□ -1.4
CLK4-213ENST00000523013 ITGB3P05106 788 aa6.31□□□□□ -1.4
CLK4-213ENST00000523013 ZNF28P17035 718 aa6.31□□□□□ -1.4
CLK4-213ENST00000523013 MCTP2Q6DN12 878 aa6.31□□□□□ -1.4
CLK4-213ENST00000523013 DBX2Q6ZNG2 339 aa6.31□□□□□ -1.4
CLK4-213ENST00000523013 SGSM3Q96HU1 749 aa6.31□□□□□ -1.4
CLK4-213ENST00000523013 ARHGEF4Q9NR80 690 aa6.31□□□□□ -1.4
CLK4-213ENST00000523013 MYOTQ9UBF9 498 aa6.31□□□□□ -1.4
CLK4-213ENST00000523013 WASF3Q9UPY6 502 aa6.31□□□□□ -1.4
CLK4-213ENST00000523013 MROH6A6NGR9 719 aa6.3□□□□□ -1.4
CLK4-213ENST00000523013 HSP90AA2PQ14568 343 aaPredicted RBP6.3□□□□□ -1.4
CLK4-213ENST00000523013 USP53Q70EK8 1073 aa6.3□□□□□ -1.4
CLK4-213ENST00000523013 PHF20Q9BVI0 1012 aa6.3□□□□□ -1.4
CLK4-213ENST00000523013 JAM3Q9BX67 310 aa6.3□□□□□ -1.4
CLK4-213ENST00000523013 SMOC1Q9H4F8 434 aa6.3□□□□□ -1.4
CLK4-213ENST00000523013 KIAA2012Q0VF49 1180 aa6.29□□□□□ -1.4
CLK4-213ENST00000523013 NTRK3Q16288 839 aa6.29□□□□□ -1.4
CLK4-213ENST00000523013 TBC1D10BQ4KMP7 808 aaPredicted RBP6.29□□□□□ -1.4
CLK4-213ENST00000523013 RSPO2Q6UXX9 243 aaPredicted RBP6.29□□□□□ -1.4
CLK4-213ENST00000523013 PHOSPHO1Q8TCT1 267 aa6.29□□□□□ -1.4
CLK4-213ENST00000523013 OSBP2Q969R2 916 aa6.29□□□□□ -1.4
CLK4-213ENST00000523013 ZSWIM3Q96MP5 696 aa6.29□□□□□ -1.4
CLK4-213ENST00000523013 AARSD1Q9BTE6 412 aaKnown RBP6.29□□□□□ -1.4
CLK4-213ENST00000523013 ASH2LQ9UBL3 628 aa6.29□□□□□ -1.4
CLK4-213ENST00000523013 INVSQ9Y283 1065 aa6.29□□□□□ -1.4
CLK4-213ENST00000523013 PLATP00750 562 aa6.28□□□□□ -1.4
CLK4-213ENST00000523013 FGFR1P11362 822 aa6.28□□□□□ -1.4
CLK4-213ENST00000523013 RBM25P49756 843 aaKnown RBP6.28□□□□□ -1.4
CLK4-213ENST00000523013 MLLT6P55198 1093 aaPredicted RBP6.28□□□□□ -1.4
CLK4-213ENST00000523013 RAB33AQ14088 237 aa6.28□□□□□ -1.4
CLK4-213ENST00000523013 CYP4F22Q6NT55 531 aa6.28□□□□□ -1.4
CLK4-213ENST00000523013 KCNT2Q6UVM3 1135 aa6.28□□□□□ -1.4
CLK4-213ENST00000523013 PROSER1Q86XN7 944 aa6.28□□□□□ -1.4
CLK4-213ENST00000523013 LGI4Q8N135 537 aa6.28□□□□□ -1.4
CLK4-213ENST00000523013 ST13P5Q8NFI4 369 aaPredicted RBP6.28□□□□□ -1.4
CLK4-213ENST00000523013 PIP4K2CQ8TBX8 421 aa6.28□□□□□ -1.4
CLK4-213ENST00000523013 SLC6A20Q9NP91 592 aa6.28□□□□□ -1.4
CLK4-213ENST00000523013 HSPBP1Q9NZL4 362 aa6.28□□□□□ -1.4
CLK4-213ENST00000523013 RBPJLQ9UBG7 517 aa6.28□□□□□ -1.4
CLK4-213ENST00000523013 IQCA1LA6NCM1 817 aa6.27□□□□□ -1.41
CLK4-213ENST00000523013 C9orf118A6NHY6 69 aa6.27□□□□□ -1.41
CLK4-213ENST00000523013 KRIT1O00522 736 aa6.27□□□□□ -1.41
CLK4-213ENST00000523013 PRODHO43272 600 aa6.27□□□□□ -1.41
CLK4-213ENST00000523013 PABPC1P11940 636 aaKnown RBP6.27□□□□□ -1.41
CLK4-213ENST00000523013 IL13P35225 146 aa6.27□□□□□ -1.41
CLK4-213ENST00000523013 MAGEA10P43363 369 aaPredicted RBP6.27□□□□□ -1.41
CLK4-213ENST00000523013 PRAMEF18Q5VWM3 479 aa6.27□□□□□ -1.41
CLK4-213ENST00000523013 LBX2Q6XYB7 198 aa6.27□□□□□ -1.41
CLK4-213ENST00000523013 TTLL11Q8NHH1 800 aa6.27□□□□□ -1.41
CLK4-213ENST00000523013 DCAF4Q8WV16 495 aa6.27□□□□□ -1.41
CLK4-213ENST00000523013 CLEC4DQ8WXI8 215 aa6.27□□□□□ -1.41
CLK4-213ENST00000523013 ZCCHC14Q8WYQ9 949 aaKnown RBP6.27□□□□□ -1.41
CLK4-213ENST00000523013 MBD6Q96DN6 1003 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms