RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 ZAP70P43403 619 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 DPYDQ12882 1025 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 GRB14Q14449 540 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 RRP1BQ14684 758 aaKnown RBP7.53□□□□□ -1.2
PABPC1-220ENST00000522658 GJC2Q5T442 439 aaPredicted RBP7.53□□□□□ -1.2
PABPC1-220ENST00000522658 CCDC174Q6PII3 467 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 NCAPG2Q86XI2 1143 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 DMRTC2Q8IXT2 367 aaPredicted RBP7.53□□□□□ -1.2
PABPC1-220ENST00000522658 MAGEB6Q8N7X4 407 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 MB21D1Q8N884 522 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 MIGA1Q8NAN2 632 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 ARHGAP45Q92619 1136 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 C12orf42Q96LP6 360 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 GUCD1Q96NT3 240 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 PNMA5Q96PV4 448 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 LPIN3Q9BQK8 851 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 CRNKL1Q9BZJ0 848 aaKnown RBP7.53□□□□□ -1.2
PABPC1-220ENST00000522658 KIAA1683Q9H0B3 1180 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 EHD4Q9H223 541 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 DNAJC18Q9H819 358 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 ZFATQ9P243 1243 aa7.53□□□□□ -1.2
PABPC1-220ENST00000522658 CTDP1Q9Y5B0 961 aaPredicted RBP7.53□□□□□ -1.2
PABPC1-220ENST00000522658 PLXNB2O15031 1838 aa7.52□□□□□ -1.2
PABPC1-220ENST00000522658 FRMPD3Q5JV73 1810 aa7.52□□□□□ -1.2
PABPC1-220ENST00000522658 DOCK3Q8IZD9 2030 aa7.52□□□□□ -1.2
PABPC1-220ENST00000522658 SCO2A0A1W2PP80 73 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 SEPT4O43236 478 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 STRNO43815 780 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 LGR5O75473 907 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 SURF6O75683 361 aaKnown RBP7.52□□□□□ -1.21
PABPC1-220ENST00000522658 RGS9O75916 674 aaPredicted RBP7.52□□□□□ -1.21
PABPC1-220ENST00000522658 FLOT1O75955 427 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 HOXC6P09630 235 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 RARBP10826 455 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 RAG1P15918 1043 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 DYNLL1P63167 89 aaKnown RBP7.52□□□□□ -1.21
PABPC1-220ENST00000522658 SMAD3P84022 425 aaKnown RBP7.52□□□□□ -1.21
PABPC1-220ENST00000522658 TRIM60Q495X7 471 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 ANO1Q5XXA6 986 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 OLFML2BQ68BL8 750 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 TMED8Q6PL24 325 aaPredicted RBP7.52□□□□□ -1.21
PABPC1-220ENST00000522658 CATSPERGQ6ZRH7 1159 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 RNF180Q86T96 592 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 ZNF384Q8TF68 577 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 USP6NLQ92738 828 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 BADQ92934 168 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 HINFPQ9BQA5 517 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 DBNDD2Q9BQY9 259 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 PPP1R12CQ9BZL4 782 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 SPATC1LQ9H0A9 340 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 ZFP64Q9NPA5 681 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 GPR108Q9NPR9 543 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 C11orf16Q9NQ32 467 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 HOXC10Q9NYD6 342 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 FRRS1LQ9P0K9 344 aa7.52□□□□□ -1.21
PABPC1-220ENST00000522658 FOCADQ5VW36 1801 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 TMEM265A0A087WTH1 108 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 PNMA6EA0A0J9YXQ4 647 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 CYP2E1P05181 493 aaPredicted RBP7.51□□□□□ -1.21
PABPC1-220ENST00000522658 CLTBP09497 229 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 FCER1AP12319 257 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 CYBAP13498 195 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 ERCC3P19447 782 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 COPB2P35606 906 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 IDH3AP50213 366 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 RARSP54136 660 aaKnown RBP7.51□□□□□ -1.21
PABPC1-220ENST00000522658 PLAURQ03405 335 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 COG2Q14746 738 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 TTF1Q15361 905 aaPredicted RBP7.51□□□□□ -1.21
PABPC1-220ENST00000522658 SHROOM1Q2M3G4 852 aaPredicted RBP7.51□□□□□ -1.21
PABPC1-220ENST00000522658 LBX2Q6XYB7 198 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 SLC39A5Q6ZMH5 540 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 CCDC129Q6ZRS4 1044 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 METTL16Q86W50 562 aaKnown RBP7.51□□□□□ -1.21
PABPC1-220ENST00000522658 ERC1Q8IUD2 1116 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 ANKMY2Q8IV38 441 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 ITPRIPQ8IWB1 547 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 DTWD1Q8N5C7 304 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 NPLOC4Q8TAT6 608 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 MYLIPQ8WY64 445 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 CDX2Q99626 313 aaPredicted RBP7.51□□□□□ -1.21
PABPC1-220ENST00000522658 BCL11AQ9H165 835 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 MROH8Q9H579 483 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 XPNPEP3Q9NQH7 507 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 MCM9Q9NXL9 1143 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 FLRT1Q9NZU1 646 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 KLK14Q9P0G3 267 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 CNPY2Q9Y2B0 182 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 TACC3Q9Y6A5 838 aa7.51□□□□□ -1.21
PABPC1-220ENST00000522658 SIPA1L1O43166 1804 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 NAV1Q8NEY1 1877 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 DCDC2CA8MYV0 355 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 USP17L12C9JPN9 530 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 USP17L21D6R901 530 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 PQBP1O60828 265 aaKnown RBP7.5□□□□□ -1.21
PABPC1-220ENST00000522658 CNMDO75829 334 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 SLC25A27O95847 323 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 TRIM27P14373 513 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 EPB42P16452 691 aa7.5□□□□□ -1.21
PABPC1-220ENST00000522658 ADCYAP1R1P41586 468 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms