RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 TDHQ8IZJ6 230 aa9.55□□□□□ -0.88
PVT1-213ENST00000522414 CEP95Q96GE4 821 aa9.55□□□□□ -0.88
PVT1-213ENST00000522414 TINF2Q9BSI4 451 aa9.55□□□□□ -0.88
PVT1-213ENST00000522414 SEMA6BQ9H3T3 888 aa9.55□□□□□ -0.88
PVT1-213ENST00000522414 SLC5A4Q9NY91 659 aa9.55□□□□□ -0.88
PVT1-213ENST00000522414 NYAP2Q9P242 653 aa9.55□□□□□ -0.88
PVT1-213ENST00000522414 ATP11BQ9Y2G3 1177 aa9.55□□□□□ -0.88
PVT1-213ENST00000522414 ZNFX1Q9P2E3 1918 aaKnown RBP9.54□□□□□ -0.88
PVT1-213ENST00000522414 CUL9Q8IWT3 2517 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 IGKV6D-41A0A0C4DH26 115 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 PGK1P00558 417 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 RTP1P59025 263 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 TFAP4Q01664 338 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 LRRC41Q15345 812 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 LRIT3Q3SXY7 679 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 TMEM259Q4ZIN3 620 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 ANKRD45Q5TZF3 282 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 CCDC129Q6ZRS4 1044 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 RNF135Q8IUD6 432 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 LRRC47Q8N1G4 583 aaKnown RBP9.54□□□□□ -0.88
PVT1-213ENST00000522414 PGBD3Q8N328 593 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 DEFB123Q8N688 67 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 PRPF38AQ8NAV1 312 aaKnown RBP9.54□□□□□ -0.88
PVT1-213ENST00000522414 MKL1Q969V6 931 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 LENG1Q96BZ8 264 aaPredicted RBP9.54□□□□□ -0.88
PVT1-213ENST00000522414 LBHD1Q9BQE6 289 aaPredicted RBP9.54□□□□□ -0.88
PVT1-213ENST00000522414 SLF1Q9BQI6 1058 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 RAVER2Q9HCJ3 691 aaKnown RBP9.54□□□□□ -0.88
PVT1-213ENST00000522414 MTMR4Q9NYA4 1195 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 UNC80Q8N2C7 3258 aa9.54□□□□□ -0.88
PVT1-213ENST00000522414 ROBO3Q96MS0 1386 aa9.53□□□□□ -0.88
PVT1-213ENST00000522414 KBTBD13C9JR72 458 aa9.53□□□□□ -0.88
PVT1-213ENST00000522414 ZBED4O75132 1171 aa9.53□□□□□ -0.88
PVT1-213ENST00000522414 STAU1O95793 577 aaKnown RBP9.53□□□□□ -0.88
PVT1-213ENST00000522414 SNAI1O95863 264 aaPredicted RBP9.53□□□□□ -0.88
PVT1-213ENST00000522414 ZNF865P0CJ78 1059 aaPredicted RBP9.53□□□□□ -0.88
PVT1-213ENST00000522414 GNAT2P19087 354 aa9.53□□□□□ -0.88
PVT1-213ENST00000522414 MCCD1P59942 119 aaPredicted RBP9.53□□□□□ -0.88
PVT1-213ENST00000522414 TRIM60Q495X7 471 aa9.53□□□□□ -0.88
PVT1-213ENST00000522414 ZMYM1Q5SVZ6 1142 aa9.53□□□□□ -0.88
PVT1-213ENST00000522414 SNRNP48Q6IEG0 339 aaKnown RBP9.53□□□□□ -0.88
PVT1-213ENST00000522414 TMEM214Q6NUQ4 689 aaKnown RBP9.53□□□□□ -0.88
PVT1-213ENST00000522414 DDX11Q96FC9 970 aa9.53□□□□□ -0.88
PVT1-213ENST00000522414 CRBNQ96SW2 442 aa9.53□□□□□ -0.88
PVT1-213ENST00000522414 FSD1Q9BTV5 496 aa9.53□□□□□ -0.88
PVT1-213ENST00000522414 PRDM5Q9NQX1 630 aaPredicted RBP9.53□□□□□ -0.88
PVT1-213ENST00000522414 DNAAF2Q9NVR5 837 aaKnown RBP9.53□□□□□ -0.88
PVT1-213ENST00000522414 KLF15Q9UIH9 416 aa9.53□□□□□ -0.88
PVT1-213ENST00000522414 TACC3Q9Y6A5 838 aa9.53□□□□□ -0.88
PVT1-213ENST00000522414 CDH23Q9H251 3354 aa9.53□□□□□ -0.88
PVT1-213ENST00000522414 TTC41PQ6P2S7 1318 aa9.53□□□□□ -0.88
PVT1-213ENST00000522414 TRIM43BA6NCK2 446 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 ERC2O15083 957 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 FOXP2O15409 715 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 NMT2O60551 498 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 TTLL1O95922 423 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 TSPY3P0CV98 308 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 TSPY8P0CW00 308 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 ARAFP10398 606 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 RARBP10826 455 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 VCANP13611 3396 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 ITGB8P26012 769 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 SNAP25P60880 206 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 TLE2Q04725 743 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 EFHC2Q5JST6 749 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 GNASQ5JWF2 1037 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 VPS53Q5VIR6 699 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 SLFN13Q68D06 897 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 SLC17A8Q8NDX2 589 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 BADQ92934 168 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 TRIM43Q96BQ3 446 aaPredicted RBP9.52□□□□□ -0.89
PVT1-213ENST00000522414 TEX13BQ9BXU2 312 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 NACAP1Q9BZK3 213 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 XPNPEP3Q9NQH7 507 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 PRKAG2Q9UGJ0 569 aa9.52□□□□□ -0.89
PVT1-213ENST00000522414 DIS3Q9Y2L1 958 aaKnown RBP9.52□□□□□ -0.89
PVT1-213ENST00000522414 EYSQ5T1H1 3165 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 DNAJC25-GNG10A0A024R161 153 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 TMEM232C9JQI7 657 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 BMP3P12645 472 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 MX1P20591 662 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 MCCP23508 829 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 RRP1P56182 461 aaKnown RBP9.51□□□□□ -0.89
PVT1-213ENST00000522414 PDE4BQ07343 736 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 PPARAQ07869 468 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 SHHQ15465 462 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 LRRFIP1Q32MZ4 808 aaKnown RBP9.51□□□□□ -0.89
PVT1-213ENST00000522414 C9orf50Q5SZB4 431 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 KRTAP1-3Q8IUG1 177 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 FAM161BQ96MY7 647 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 NAPBQ9H115 298 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 CRISPLD1Q9H336 500 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 SLC38A10Q9HBR0 1119 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 ZNF287Q9HBT7 754 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 IL17RBQ9NRM6 502 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 HOMER2Q9NSB8 354 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 MTMR10Q9NXD2 777 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 FEM1BQ9UK73 627 aa9.51□□□□□ -0.89
PVT1-213ENST00000522414 ISY1Q9ULR0 285 aaKnown RBP9.51□□□□□ -0.89
PVT1-213ENST00000522414 CTDP1Q9Y5B0 961 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms