RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 IFIH1Q9BYX4 1025 aaKnown RBP17.67■□□□□ 0.42
USP42-207ENST00000521713 SPATS2LQ9NUQ6 558 aaKnown RBP17.67■□□□□ 0.42
USP42-207ENST00000521713 ANKFY1Q9P2R3 1169 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 CNTNAP4Q9C0A0 1308 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 DIP2AQ14689 1571 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 PIK3C2BO00750 1634 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 IRX4P78413 519 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 NR5A1Q13285 461 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 PEX26Q7Z412 305 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 PROCA1Q8NCQ7 364 aaPredicted RBP17.67■□□□□ 0.42
USP42-207ENST00000521713 BCAS4Q8TDM0 211 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 TMEM206Q9H813 350 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 NRXN1Q9ULB1 1477 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 ZBTB5O15062 677 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 BPIFB4P59827 614 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 ARL6IP4Q66PJ3 421 aaKnown RBP17.67■□□□□ 0.42
USP42-207ENST00000521713 TYW1BQ6NUM6 668 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 CEP120Q8N960 986 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 KMT5AQ9NQR1 393 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 NUB1Q9Y5A7 615 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 PCDHA5Q9Y5H7 936 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 TLR3O15455 904 aaKnown RBP17.67■□□□□ 0.42
USP42-207ENST00000521713 CYP2D6P10635 497 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 EIF2AK2P19525 551 aaKnown RBP17.67■□□□□ 0.42
USP42-207ENST00000521713 PHLDB3Q6NSJ2 640 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 TRIM58Q8NG06 486 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 RAB3IL1Q8TBN0 382 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 MED10Q9BTT4 135 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 RCOR1Q9UKL0 485 aa17.67■□□□□ 0.42
USP42-207ENST00000521713 SLFN14P0C7P3 912 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 CFAP157Q5JU67 520 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 STRIP1Q5VSL9 837 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 RCSD1Q6JBY9 416 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 GAS2L3Q86XJ1 694 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 TBC1D16Q8TBP0 767 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 PGBD1Q96JS3 809 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 GBP5Q96PP8 586 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 NKX1-1Q15270 411 aaPredicted RBP17.66■□□□□ 0.42
USP42-207ENST00000521713 ZNF827Q17R98 1081 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 GKAP1Q5VSY0 366 aaPredicted RBP17.66■□□□□ 0.42
USP42-207ENST00000521713 TSC1Q92574 1164 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 TECPR2O15040 1411 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 SNCBQ16143 134 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 LINC00301Q8NCQ3 95 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 RAB17Q9H0T7 212 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 CEP104O60308 925 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 MKRN3Q13064 507 aaKnown RBP17.66■□□□□ 0.42
USP42-207ENST00000521713 PDXDC2PQ6P474 469 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 MYO1AQ9UBC5 1043 aa17.66■□□□□ 0.42
USP42-207ENST00000521713 PPM1KQ8N3J5 372 aa17.65■□□□□ 0.42
USP42-207ENST00000521713 U2AF1L4Q8WU68 220 aaKnown RBP17.65■□□□□ 0.42
USP42-207ENST00000521713 CEP170BQ9Y4F5 1589 aaPredicted RBP17.65■□□□□ 0.42
USP42-207ENST00000521713 CHRNA5P30532 468 aa17.65■□□□□ 0.42
USP42-207ENST00000521713 PDE6CP51160 858 aa17.65■□□□□ 0.42
USP42-207ENST00000521713 LINC00116Q8NCU8 138 aa17.65■□□□□ 0.42
USP42-207ENST00000521713 ARHGEF2Q92974 986 aaKnown RBP17.65■□□□□ 0.42
USP42-207ENST00000521713 FAM81BQ96LP2 452 aa17.65■□□□□ 0.42
USP42-207ENST00000521713 BCAP29Q9UHQ4 241 aa17.65■□□□□ 0.42
USP42-207ENST00000521713 PPP2R2CQ9Y2T4 447 aa17.65■□□□□ 0.42
USP42-207ENST00000521713 DCCP43146 1447 aa17.65■□□□□ 0.42
USP42-207ENST00000521713 RASA3Q14644 834 aa17.65■□□□□ 0.42
USP42-207ENST00000521713 GRIN3BO60391 1043 aa17.65■□□□□ 0.42
USP42-207ENST00000521713 PPP1R18Q6NYC8 613 aa17.65■□□□□ 0.42
USP42-207ENST00000521713 TDRD7Q8NHU6 1098 aaKnown RBP17.65■□□□□ 0.42
USP42-207ENST00000521713 TBC1D31Q96DN5 1066 aa17.65■□□□□ 0.42
USP42-207ENST00000521713 PRKAG2Q9UGJ0 569 aa17.65■□□□□ 0.42
USP42-207ENST00000521713 RFX1P22670 979 aa17.64■□□□□ 0.42
USP42-207ENST00000521713 UBE2SQ16763 222 aa17.64■□□□□ 0.42
USP42-207ENST00000521713 FAM83BQ5T0W9 1011 aa17.64■□□□□ 0.42
USP42-207ENST00000521713 HAUS4Q9H6D7 363 aa17.64■□□□□ 0.42
USP42-207ENST00000521713 HOMER3Q9NSC5 361 aa17.64■□□□□ 0.42
USP42-207ENST00000521713 PNPLA7Q6ZV29 1317 aa17.64■□□□□ 0.41
USP42-207ENST00000521713 KRT71Q3SY84 523 aa17.64■□□□□ 0.41
USP42-207ENST00000521713 GIMAP8Q8ND71 665 aaPredicted RBP17.64■□□□□ 0.41
USP42-207ENST00000521713 SRPRBQ9Y5M8 271 aaKnown RBP17.64■□□□□ 0.41
USP42-207ENST00000521713 ARHGEF37A1IGU5 675 aa17.64■□□□□ 0.41
USP42-207ENST00000521713 CAPN9O14815 690 aa17.64■□□□□ 0.41
USP42-207ENST00000521713 COPB2P35606 906 aa17.64■□□□□ 0.41
USP42-207ENST00000521713 PSMC2P35998 433 aaKnown RBP17.64■□□□□ 0.41
USP42-207ENST00000521713 TPD52P55327 224 aaPredicted RBP17.64■□□□□ 0.41
USP42-207ENST00000521713 R3HDM1Q15032 1099 aaKnown RBP17.64■□□□□ 0.41
USP42-207ENST00000521713 EXOC3L4Q17RC7 722 aa17.64■□□□□ 0.41
USP42-207ENST00000521713 EEPD1Q7L9B9 569 aa17.64■□□□□ 0.41
USP42-207ENST00000521713 PHLPP2Q6ZVD8 1323 aa17.64■□□□□ 0.41
USP42-207ENST00000521713 NR2F2P24468 414 aa17.64■□□□□ 0.41
USP42-207ENST00000521713 FKBP3Q00688 224 aaKnown RBP17.64■□□□□ 0.41
USP42-207ENST00000521713 TBC1D10CQ8IV04 446 aa17.64■□□□□ 0.41
USP42-207ENST00000521713 NT5C1BQ96P26 610 aa17.64■□□□□ 0.41
USP42-207ENST00000521713 AMFRQ9UKV5 643 aa17.64■□□□□ 0.41
USP42-207ENST00000521713 SPP2Q13103 211 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 ALCAMQ13740 583 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 HADHQ16836 314 aaKnown RBP17.63■□□□□ 0.41
USP42-207ENST00000521713 MAP3K21Q5TCX8 1036 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 GPT2Q8TD30 523 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 STK36Q9NRP7 1315 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 ZBTB24O43167 697 aaPredicted RBP17.63■□□□□ 0.41
USP42-207ENST00000521713 ZSCAN20P17040 1043 aaPredicted RBP17.63■□□□□ 0.41
USP42-207ENST00000521713 LIG3P49916 1009 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 STXBP2Q15833 593 aa17.63■□□□□ 0.41
USP42-207ENST00000521713 RPUSD2Q8IZ73 545 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms