RNA–Protein interactions for RNA: ENST00000521118.5

CDKL3-206, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKL3, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-206ENST00000521118 PCDHA2Q9Y5H9 948 aa16.43■□□□□ 0.22
CDKL3-206ENST00000521118 MMP14P50281 582 aa16.43■□□□□ 0.22
CDKL3-206ENST00000521118 ARSHQ5FYA8 562 aa16.43■□□□□ 0.22
CDKL3-206ENST00000521118 BTNL9Q6UXG8 535 aa16.43■□□□□ 0.22
CDKL3-206ENST00000521118 CCDC84Q86UT8 332 aaPredicted RBP16.43■□□□□ 0.22
CDKL3-206ENST00000521118 BCAS3Q9H6U6 928 aa16.43■□□□□ 0.22
CDKL3-206ENST00000521118 SHTN1A0MZ66 631 aa16.42■□□□□ 0.22
CDKL3-206ENST00000521118 MEIS1O00470 390 aa16.42■□□□□ 0.22
CDKL3-206ENST00000521118 NDUFA10O95299 355 aa16.42■□□□□ 0.22
CDKL3-206ENST00000521118 PLA2G4BP0C869 781 aa16.42■□□□□ 0.22
CDKL3-206ENST00000521118 DPEP1P16444 411 aa16.42■□□□□ 0.22
CDKL3-206ENST00000521118 PPP2R3AQ06190 1150 aa16.42■□□□□ 0.22
CDKL3-206ENST00000521118 ZCWPW2Q504Y3 356 aa16.42■□□□□ 0.22
CDKL3-206ENST00000521118 CCDC155Q8N6L0 562 aa16.42■□□□□ 0.22
CDKL3-206ENST00000521118 MNS1Q8NEH6 495 aa16.42■□□□□ 0.22
CDKL3-206ENST00000521118 SUPT20HQ8NEM7 779 aa16.42■□□□□ 0.22
CDKL3-206ENST00000521118 GLIS2Q9BZE0 524 aaPredicted RBP16.42■□□□□ 0.22
CDKL3-206ENST00000521118 PANK4Q9NVE7 773 aa16.42■□□□□ 0.22
CDKL3-206ENST00000521118 EPN1Q9Y6I3 576 aaPredicted RBP16.42■□□□□ 0.22
CDKL3-206ENST00000521118 VIL1P09327 827 aaKnown RBP16.41■□□□□ 0.22
CDKL3-206ENST00000521118 CYP11B2P19099 503 aa16.41■□□□□ 0.22
CDKL3-206ENST00000521118 AP3B2Q13367 1082 aa16.41■□□□□ 0.22
CDKL3-206ENST00000521118 MEA1Q16626 185 aa16.41■□□□□ 0.22
CDKL3-206ENST00000521118 FAM83BQ5T0W9 1011 aa16.41■□□□□ 0.22
CDKL3-206ENST00000521118 TMEM39BQ9GZU3 492 aa16.41■□□□□ 0.22
CDKL3-206ENST00000521118 DDX41Q9UJV9 622 aaKnown RBP16.41■□□□□ 0.22
CDKL3-206ENST00000521118 SIK3Q9Y2K2 1263 aa16.41■□□□□ 0.22
CDKL3-206ENST00000521118 RCCD1A6NED2 376 aa16.41■□□□□ 0.22
CDKL3-206ENST00000521118 SPATA31C1P0DKV0 1188 aa16.41■□□□□ 0.22
CDKL3-206ENST00000521118 SREBF1P36956 1147 aa16.41■□□□□ 0.22
CDKL3-206ENST00000521118 CLCN6P51797 869 aa16.41■□□□□ 0.22
CDKL3-206ENST00000521118 MIGA2Q7L4E1 593 aa16.41■□□□□ 0.22
CDKL3-206ENST00000521118 GPBP1Q86WP2 473 aa16.41■□□□□ 0.22
CDKL3-206ENST00000521118 CATSPER3Q86XQ3 398 aa16.41■□□□□ 0.22
CDKL3-206ENST00000521118 TTLL6Q8N841 843 aa16.41■□□□□ 0.22
CDKL3-206ENST00000521118 ERGIC2Q96RQ1 377 aa16.41■□□□□ 0.22
CDKL3-206ENST00000521118 KIF13BQ9NQT8 1826 aa16.41■□□□□ 0.22
CDKL3-206ENST00000521118 KIF5CO60282 957 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 PLEKP08567 350 aaPredicted RBP16.4■□□□□ 0.22
CDKL3-206ENST00000521118 TRIM21P19474 475 aaKnown RBP16.4■□□□□ 0.22
CDKL3-206ENST00000521118 PPP1R2P41236 205 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 SLC12A3P55017 1021 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 ZYXQ15942 572 aaKnown RBP16.4■□□□□ 0.22
CDKL3-206ENST00000521118 VWA3BQ502W6 1294 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 NCAPH2Q6IBW4 605 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 FAM114A1Q8IWE2 563 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 LARGE2Q8N3Y3 721 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 GLT8D2Q9H1C3 349 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 ZSWIM4Q9H7M6 989 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 PRDM10Q9NQV6 1147 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 MSH4O15457 936 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 Q4G0T1 1027 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 FAM26FQ5R3K3 315 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 RSRC2Q7L4I2 434 aaKnown RBP16.4■□□□□ 0.22
CDKL3-206ENST00000521118 DEFB132Q7Z7B7 95 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 NELFCDQ8IXH7 590 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 ZFP91Q96JP5 570 aaPredicted RBP16.4■□□□□ 0.22
CDKL3-206ENST00000521118 VEZTQ9HBM0 779 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 POLD4Q9HCU8 107 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 VAV3Q9UKW4 847 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 ZBTB21Q9ULJ3 1066 aa16.4■□□□□ 0.22
CDKL3-206ENST00000521118 KDM3AQ9Y4C1 1321 aa16.39■□□□□ 0.21
CDKL3-206ENST00000521118 EFCAB8A8MWE9 144 aa16.39■□□□□ 0.21
CDKL3-206ENST00000521118 ZSCAN20P17040 1043 aaPredicted RBP16.39■□□□□ 0.21
CDKL3-206ENST00000521118 CASP5P51878 434 aa16.39■□□□□ 0.21
CDKL3-206ENST00000521118 DLGAP5Q15398 846 aa16.39■□□□□ 0.21
CDKL3-206ENST00000521118 CCDC174Q6PII3 467 aa16.39■□□□□ 0.21
CDKL3-206ENST00000521118 MOXD1Q6UVY6 613 aa16.39■□□□□ 0.21
CDKL3-206ENST00000521118 MYOCDQ8IZQ8 938 aa16.39■□□□□ 0.21
CDKL3-206ENST00000521118 FAM151AQ8WW52 585 aa16.39■□□□□ 0.21
CDKL3-206ENST00000521118 UBXN4Q92575 508 aa16.39■□□□□ 0.21
CDKL3-206ENST00000521118 PCMTD1Q96MG8 357 aaPredicted RBP16.39■□□□□ 0.21
CDKL3-206ENST00000521118 NDST4Q9H3R1 872 aa16.39■□□□□ 0.21
CDKL3-206ENST00000521118 HERC5Q9UII4 1024 aaKnown RBP16.39■□□□□ 0.21
CDKL3-206ENST00000521118 EML1O00423 815 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 NAP1L4Q99733 375 aaKnown RBP16.38■□□□□ 0.21
CDKL3-206ENST00000521118 GTPBP4Q9BZE4 634 aaKnown RBP16.38■□□□□ 0.21
CDKL3-206ENST00000521118 NT5C3AQ9H0P0 336 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 FAM207AQ9NSI2 230 aaPredicted RBP16.38■□□□□ 0.21
CDKL3-206ENST00000521118 TMX2Q9Y320 296 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 RBBP6Q7Z6E9 1792 aaKnown RBP16.38■□□□□ 0.21
CDKL3-206ENST00000521118 SPDYE3A6NKU9 549 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 ZNF263O14978 683 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 POLD1P28340 1107 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 UBXN2AP68543 259 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 ZBED6P86452 979 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 LRRC63Q05C16 580 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 PSMD2Q13200 908 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 PABPC4Q13310 644 aaKnown RBP eCLIP16.38■□□□□ 0.21
CDKL3-206ENST00000521118 TEX35Q5T0J7 233 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 SAMD1Q6SPF0 538 aaPredicted RBP16.38■□□□□ 0.21
CDKL3-206ENST00000521118 SCFD1Q8WVM8 642 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 PSMD1Q99460 953 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 WDR18Q9BV38 432 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 LACRTQ9GZZ8 138 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 FBXO28Q9NVF7 368 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 PGAP2Q9UHJ9 254 aa16.38■□□□□ 0.21
CDKL3-206ENST00000521118 PUF60Q9UHX1 559 aaKnown RBP16.38■□□□□ 0.21
CDKL3-206ENST00000521118 GUCA1BQ9UMX6 200 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms