RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 DEPDC4Q8N2C3 294 aa10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 SLC43A3Q8NBI5 491 aa10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 CLEC4DQ8WXI8 215 aa10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 VTI1AQ96AJ9 217 aa10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 SEMA6BQ9H3T3 888 aa10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 RNF41Q9H4P4 317 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 Q9Y3F1 56 aa10.89□□□□□ -0.67
CTNNA1-221ENST00000520339 MYH7P12883 1935 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 CARNS1A5YM72 827 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 NFIBO00712 420 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 ZNF213O14771 459 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 DYNC1LI2O43237 492 aaPredicted RBP10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 NT5C2P49902 561 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 FPGSQ05932 587 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 CXCL17Q6UXB2 119 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 EEPD1Q7L9B9 569 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 TLK2Q86UE8 772 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 DGKHQ86XP1 1220 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 FBXO16Q8IX29 292 aaPredicted RBP10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 FAM126BQ8IXS8 530 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 ANKS1AQ92625 1134 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 ESR2Q92731 530 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 FOXJ1Q92949 421 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 FAM161BQ96MY7 647 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 AP5M1Q9H0R1 490 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 VTA1Q9NP79 307 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 PNMA2Q9UL42 364 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 USTQ9Y2C2 406 aa10.88□□□□□ -0.67
CTNNA1-221ENST00000520339 SMCHD1A6NHR9 2005 aa10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 GRIN2DO15399 1336 aa10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 MROH7Q68CQ1 1323 aa10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 PARP14Q460N5 1801 aa10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 LOC102724159A0A0B4J2E5 919 aa10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 CABYRO75952 493 aa10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 CD4P01730 458 aa10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 PWP2Q15269 919 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 FSCN1Q16658 493 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 ZNF697Q5TEC3 545 aa10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 MFSD5Q6N075 450 aa10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 CWC27Q6UX04 472 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 KIAA1211Q6ZU35 1233 aa10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 C16orf59Q7L2K0 433 aa10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 BPHLQ86WA6 291 aaPredicted RBP10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 ZNF511Q8NB15 262 aa10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 RNPC3Q96LT9 517 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 CDX2Q99626 313 aaPredicted RBP10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 TTYH1Q9H313 450 aaPredicted RBP10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 ADD3Q9UEY8 706 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-221ENST00000520339 NEDD4P46934 1319 aa10.86□□□□□ -0.67
CTNNA1-221ENST00000520339 WDR19Q8NEZ3 1342 aa10.86□□□□□ -0.67
CTNNA1-221ENST00000520339 RBM47A0AV96 593 aaKnown RBP10.86□□□□□ -0.67
CTNNA1-221ENST00000520339 HIP1O00291 1037 aa10.86□□□□□ -0.67
CTNNA1-221ENST00000520339 ZEB2O60315 1214 aa10.86□□□□□ -0.67
CTNNA1-221ENST00000520339 ALDH5A1P51649 535 aaPredicted RBP10.86□□□□□ -0.67
CTNNA1-221ENST00000520339 DUSP28Q4G0W2 176 aa10.86□□□□□ -0.67
CTNNA1-221ENST00000520339 GPATCH4Q5T3I0 446 aaKnown RBP10.86□□□□□ -0.67
CTNNA1-221ENST00000520339 SLC30A10Q6XR72 485 aa10.86□□□□□ -0.67
CTNNA1-221ENST00000520339 PHTF2Q8N3S3 785 aa10.86□□□□□ -0.67
CTNNA1-221ENST00000520339 PLPP7Q8NBV4 271 aa10.86□□□□□ -0.67
CTNNA1-221ENST00000520339 ZKSCAN3Q9BRR0 538 aa10.86□□□□□ -0.67
CTNNA1-221ENST00000520339 DSCC1Q9BVC3 393 aa10.86□□□□□ -0.67
CTNNA1-221ENST00000520339 UBA5Q9GZZ9 404 aa10.86□□□□□ -0.67
CTNNA1-221ENST00000520339 DIAPH3Q9NSV4 1193 aa10.86□□□□□ -0.67
CTNNA1-221ENST00000520339 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 PTPDC1A2A3K4 754 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 DLL1O00548 723 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 TLR3O15455 904 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 GOLGA8HP0CJ92 632 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 EDNRBP24530 442 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 CALML3P27482 149 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 RPS6P62753 249 aaKnown RBP10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 KCNC4Q03721 635 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 PPIGQ13427 754 aaKnown RBP eCLIP10.85□□□□□ -0.673e-8■■□□□ 12.5
CTNNA1-221ENST00000520339 ITGA7Q13683 1181 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 CCDC178Q5BJE1 867 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 TMEM240Q5SV17 173 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 RASIP1Q5U651 963 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 RNF207Q6ZRF8 634 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 IQCA1Q86XH1 822 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 RGS22Q8NE09 1264 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 SEZ6LQ9BYH1 1024 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 WDR11Q9BZH6 1224 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 ZSWIM5Q9P217 1185 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 HCSTQ9UBK5 93 aa10.85□□□□□ -0.67
CTNNA1-221ENST00000520339 FRMPD3Q5JV73 1810 aa10.84□□□□□ -0.67
CTNNA1-221ENST00000520339 TMEM265A0A087WTH1 108 aa10.84□□□□□ -0.67
CTNNA1-221ENST00000520339 B4E1Z4 1266 aa10.84□□□□□ -0.67
CTNNA1-221ENST00000520339 CSF2RAP15509 400 aa10.84□□□□□ -0.67
CTNNA1-221ENST00000520339 CYP2C18P33260 490 aa10.84□□□□□ -0.67
CTNNA1-221ENST00000520339 NCOA4Q13772 614 aa10.84□□□□□ -0.67
CTNNA1-221ENST00000520339 TMEM199Q8N511 208 aa10.84□□□□□ -0.67
CTNNA1-221ENST00000520339 ENAHQ8N8S7 591 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-221ENST00000520339 DNERQ8NFT8 737 aa10.84□□□□□ -0.67
CTNNA1-221ENST00000520339 ZSCAN10Q96SZ4 725 aaPredicted RBP10.84□□□□□ -0.67
CTNNA1-221ENST00000520339 IL25Q9H293 177 aa10.84□□□□□ -0.67
CTNNA1-221ENST00000520339 CPVLQ9H3G5 476 aa10.84□□□□□ -0.67
CTNNA1-221ENST00000520339 CTNNA3Q9UI47 895 aa10.84□□□□□ -0.67
CTNNA1-221ENST00000520339 MYH8P13535 1937 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms