RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 GSTCDQ8NEC7 633 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 PLEKHO2Q8TD55 490 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 TRMT2BQ96GJ1 504 aaKnown RBP4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 TMEM169Q96HH4 297 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 FEZ1Q99689 392 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 ALG1Q9BT22 464 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 TNFRSF12AQ9NP84 129 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 SFMBT1Q9UHJ3 866 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 PALD1Q9ULE6 856 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 RWDD3Q9Y3V2 267 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 X6R8D5 127 aa4.82□□□□□ -1.64
HMGB1P41-201ENST00000520234 ZC3H12DA2A288 527 aaKnown RBP4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 OR14I1A6ND48 311 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 C22orf46C9J442 243 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 HRKO00198 91 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 CYBBP04839 570 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 GLI4P10075 376 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 PLP2Q04941 152 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 CBX2Q14781 532 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 KIR3DS1Q14943 382 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 MROH9Q5TGP6 573 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 OLFML2BQ68BL8 750 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 PAQR3Q6TCH7 311 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 CEP68Q76N32 757 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 KIAA0907Q7Z7F0 614 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 SIRT2Q8IXJ6 389 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 SP8Q8IXZ3 490 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 NETO2Q8NC67 525 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 SLC16A11Q8NCK7 471 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 FEZF2Q8TBJ5 459 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 CHAMP1Q96JM3 812 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 MAGEB10Q96LZ2 347 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 BTG4Q9NY30 223 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 MARCH2Q9P0N8 246 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 NDOR1Q9UHB4 597 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 NUDT5Q9UKK9 219 aa4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 COA3Q9Y2R0 106 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P41-201ENST00000520234 ASXL2Q76L83 1435 aa4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 WNT9AO14904 365 aa4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 PPP1R12AO14974 1030 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 MSCO60682 206 aa4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 RAPGEF3O95398 923 aa4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 TACR1P25103 407 aa4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 PDE6BP35913 854 aa4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 YBX1P67809 324 aaKnown RBP4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 GUCY1A3Q02108 690 aa4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 PAK1Q13153 545 aa4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 ADGRF1Q5T601 910 aa4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 WWC2Q6AWC2 1192 aa4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 HHIPL2Q6UWX4 724 aa4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 MTDHQ86UE4 582 aaKnown RBP4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 SLC7A14Q8TBB6 771 aa4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 SLC52A2Q9HAB3 445 aa4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 CLDND1Q9NY35 253 aa4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 CNOT11Q9UKZ1 510 aaKnown RBP4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 PLAAQ9Y263 795 aa4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 TRAF6Q9Y4K3 522 aa4.8□□□□□ -1.64
HMGB1P41-201ENST00000520234 CADPSQ9ULU8 1353 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 TEX51A0A1B0GUA7 166 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 FAM47E-STBD1D6RA91 191 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 ARVCFO00192 962 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 SMARCA5O60264 1052 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 DGKIO75912 1065 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 DBHP09172 617 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 GRK2P25098 689 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 GRK3P35626 688 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 SLC6A11P48066 632 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 GALK1P51570 392 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 HMGA2P52926 109 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 SLC9A5Q14940 896 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 CHRNA2Q15822 529 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 NLRP10Q86W26 655 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 DCP2Q8IU60 420 aaKnown RBP4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 TEX2Q8IWB9 1127 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 PANK1Q8TE04 598 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 PEX11GQ96HA9 241 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 AP5M1Q9H0R1 490 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 SLKQ9H2G2 1235 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 CDIP1Q9H305 208 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 TMX1Q9H3N1 280 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 EPB41L1Q9H4G0 881 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 ZNF552Q9H707 407 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 TRIM39Q9HCM9 518 aa4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 INTS7Q9NVH2 962 aaKnown RBP4.79□□□□□ -1.64
HMGB1P41-201ENST00000520234 MYOCOSA0A1B0GUC4 107 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 B4E1Z4 1266 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 GSTA4O15217 222 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 MAFKO60675 156 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 ZBTB7AO95365 584 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 NPTXRO95502 500 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 CRTAMO95727 393 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 SOD2P04179 222 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 NTRK1P04629 796 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 FPR2P25090 351 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 CANXP27824 592 aaKnown RBP4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 MAPKAPK2P49137 400 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 SPIRE1Q08AE8 756 aa4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 PABPC4Q13310 644 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMGB1P41-201ENST00000520234 RAB3GAP1Q15042 981 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms