RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 FBLIM1Q8WUP2 373 aa5.99□□□□□ -1.45
CTNNA1-212ENST00000518919 PTPRN2Q92932 1015 aa5.99□□□□□ -1.45
CTNNA1-212ENST00000518919 CCDC140Q96MF4 163 aa5.99□□□□□ -1.45
CTNNA1-212ENST00000518919 THUMPD2Q9BTF0 503 aaKnown RBP5.99□□□□□ -1.45
CTNNA1-212ENST00000518919 NOP53Q9NZM5 478 aaKnown RBP5.99□□□□□ -1.45
CTNNA1-212ENST00000518919 USP21Q9UK80 565 aa5.99□□□□□ -1.45
CTNNA1-212ENST00000518919 MKL2Q9ULH7 1088 aa5.99□□□□□ -1.45
CTNNA1-212ENST00000518919 GPR55Q9Y2T6 319 aaPredicted RBP5.99□□□□□ -1.45
CTNNA1-212ENST00000518919 SF3B6Q9Y3B4 125 aaKnown RBP5.99□□□□□ -1.45
CTNNA1-212ENST00000518919 NFAT5O94916 1531 aa5.99□□□□□ -1.45
CTNNA1-212ENST00000518919 FLT4P35916 1363 aa5.98□□□□□ -1.45
CTNNA1-212ENST00000518919 FAM83GA6ND36 823 aa5.98□□□□□ -1.45
CTNNA1-212ENST00000518919 ZNF853P0CG23 659 aa5.98□□□□□ -1.45
CTNNA1-212ENST00000518919 POU3F2P20265 443 aaPredicted RBP5.98□□□□□ -1.45
CTNNA1-212ENST00000518919 NTRK3Q16288 839 aa5.98□□□□□ -1.45
CTNNA1-212ENST00000518919 SGO2Q562F6 1265 aa5.98□□□□□ -1.45
CTNNA1-212ENST00000518919 ZNF385CQ66K41 422 aaPredicted RBP5.98□□□□□ -1.45
CTNNA1-212ENST00000518919 SSH1Q8WYL5 1049 aa5.98□□□□□ -1.45
CTNNA1-212ENST00000518919 MAGEB10Q96LZ2 347 aaPredicted RBP5.98□□□□□ -1.45
CTNNA1-212ENST00000518919 PNNQ9H307 717 aaKnown RBP5.98□□□□□ -1.45
CTNNA1-212ENST00000518919 KDRP35968 1356 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 LRRC37A3O60309 1634 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 H0Y8X5 98 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 DYNC1LI2O43237 492 aaPredicted RBP5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 LRRN2O75325 713 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 KATNA1O75449 491 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 ALDH1L1O75891 902 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 RASGRP1O95267 797 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 NPTXRO95502 500 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 EYA4O95677 639 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 CPP00450 1065 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 SCG5P05408 212 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 JMJD7P0C870 316 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 ITIH2P19823 946 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 RXRBP28702 533 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 CDK5R2Q13319 367 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 TTF1Q15361 905 aaPredicted RBP5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 PCBP1Q15365 356 aaKnown RBP eCLIP5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 DHCR24Q15392 516 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 GRIK4Q16099 956 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 PRSS53Q2L4Q9 553 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 DPY19L1Q2PZI1 675 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 Q6ZS46 218 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 TMC3Q7Z5M5 1100 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 NECAB2Q7Z6G3 386 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 NGDNQ8NEJ9 315 aaKnown RBP5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 FRAT1Q92837 279 aaPredicted RBP5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 MTMR8Q96EF0 704 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 C1orf159Q96HA4 380 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 SCLYQ96I15 445 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 PSMG3-AS1Q96PY0 264 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 ASCC2Q9H1I8 757 aaPredicted RBP5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 SMC4Q9NTJ3 1288 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 TRAF6Q9Y4K3 522 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 IGSF1Q8N6C5 1336 aa5.97□□□□□ -1.45
CTNNA1-212ENST00000518919 RTL1A6NKG5 1358 aa5.96□□□□□ -1.45
CTNNA1-212ENST00000518919 TCRBV16S1A1N1A0A5B0 115 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 B4E1Z4 1266 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 STXBP3O00186 592 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 MEIS1O00470 390 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 AQP7O14520 342 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 SIGLEC6O43699 453 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 VAMP4O75379 141 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 IGHDP01880 384 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 TRIM27P14373 513 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 EPHB1P54762 984 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 SCRN1Q12765 414 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 MVPQ14764 893 aaKnown RBP5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 SEPT7Q16181 437 aaKnown RBP5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 CFAP100Q494V2 611 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 SLC35F1Q5T1Q4 408 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 ZKSCAN2Q63HK3 967 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 CWF19L1Q69YN2 538 aaKnown RBP5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 GPAT2Q6NUI2 795 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 UBE2R2Q712K3 238 aaPredicted RBP5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 RAVER1Q8IY67 606 aaKnown RBP5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 WDR66Q8TBY9 1149 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 EZH1Q92800 747 aaPredicted RBP5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 USP7Q93009 1102 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 UTP4Q969X6 686 aaKnown RBP5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 FAM46AQ96IP4 442 aaKnown RBP5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 COX4I2Q96KJ9 171 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 SMAD5Q99717 465 aaKnown RBP5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 CYP26B1Q9NR63 512 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 CHST7Q9NS84 486 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 KCNH3Q9ULD8 1083 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 CRB1P82279 1406 aa5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 SETD1BQ9UPS6 1966 aaKnown RBP5.96□□□□□ -1.46
CTNNA1-212ENST00000518919 DLG5Q8TDM6 1919 aa5.95□□□□□ -1.46
CTNNA1-212ENST00000518919 KIF24Q5T7B8 1368 aa5.95□□□□□ -1.46
CTNNA1-212ENST00000518919 SLIT3O75094 1523 aa5.95□□□□□ -1.46
CTNNA1-212ENST00000518919 GPR39O43194 453 aa5.95□□□□□ -1.46
CTNNA1-212ENST00000518919 BRINP1O60477 761 aa5.95□□□□□ -1.46
CTNNA1-212ENST00000518919 PRAMEF1O95521 474 aa5.95□□□□□ -1.46
CTNNA1-212ENST00000518919 CRTAMO95727 393 aa5.95□□□□□ -1.46
CTNNA1-212ENST00000518919 EOMESO95936 686 aa5.95□□□□□ -1.46
CTNNA1-212ENST00000518919 CD3EP07766 207 aa5.95□□□□□ -1.46
CTNNA1-212ENST00000518919 POU4F1Q01851 419 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms