RNA–Protein interactions for RNA: ENST00000518761.8

NPIPB4-204, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 3

Gene NPIPB4, Length 576 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-204	ENST00000518761	TRAF6	Q9Y4K3	522 aa		4.93	□□□□□ -1.62
NPIPB4-204	ENST00000518761		X6R8D5	127 aa		4.93	□□□□□ -1.62
NPIPB4-204	ENST00000518761	KIF14	Q15058	1648 aa		4.93	□□□□□ -1.62
NPIPB4-204	ENST00000518761	HECW1	Q76N89	1606 aa		4.93	□□□□□ -1.62
NPIPB4-204	ENST00000518761	DISP1	Q96F81	1524 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	SUPT6H	Q7KZ85	1726 aa	Known RBP	4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	CARMIL2	Q6F5E8	1435 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	ZNF503-AS2	A6NEH8	195 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	LRRC10B	A6NIK2	292 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	FAM47E-STBD1	D6RA91	191 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	HRK	O00198	91 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	GSTA4	O15217	222 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	PPP1R11	O60927	126 aa	Predicted RBP	4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	RFPL3	O75679	317 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	DGKI	O75912	1065 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	RAPGEF3	O95398	923 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	EFEMP2	O95967	443 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	GLI4	P10075	376 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	GRK2	P25098	689 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	GRK3	P35626	688 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	RAB3GAP1	Q15042	981 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	WWC2	Q6AWC2	1192 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	DCP2	Q8IU60	420 aa	Known RBP	4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	GSTCD	Q8NEC7	633 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	PANK1	Q8TE04	598 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	LIN37	Q96GY3	246 aa	Predicted RBP	4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	PEX11G	Q96HA9	241 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	AP5M1	Q9H0R1	490 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	EPB41L1	Q9H4G0	881 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	SLC52A2	Q9HAB3	445 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	PLAA	Q9Y263	795 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	RAPGEF6	Q8TEU7	1601 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	SYNJ2	O15056	1496 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	FYCO1	Q9BQS8	1478 aa		4.92	□□□□□ -1.62
NPIPB4-204	ENST00000518761	PHLDB1	Q86UU1	1377 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	ASXL2	Q76L83	1435 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	NUDT19	A8MXV4	375 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	PPP1R12A	O14974	1030 aa	Predicted RBP	4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	SMARCA5	O60264	1052 aa	Predicted RBP	4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	MAFK	O60675	156 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	MSC	O60682	206 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	ZBTB7A	O95365	584 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	SOD2	P04179	222 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	NTRK1	P04629	796 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	DBH	P09172	617 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	FPR2	P25090	351 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	SLC6A11	P48066	632 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	MAPKAPK2	P49137	400 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	SPIRE1	Q08AE8	756 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	CBX2	Q14781	532 aa	Predicted RBP	4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	SLC9A5	Q14940	896 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	PLEKHG4	Q58EX7	1191 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	NLGN1	Q8N2Q7	840 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	SEC14L1	Q92503	715 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	EPB41L4B	Q9H329	900 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	NSUN3	Q9H649	340 aa	Known RBP	4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	ZNF552	Q9H707	407 aa	Predicted RBP	4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	NUB1	Q9Y5A7	615 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	PCDHA8	Q9Y5H6	950 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	LRRC9	Q6ZRR7	1453 aa		4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	MAGI1	Q96QZ7	1491 aa	Predicted RBP	4.91	□□□□□ -1.62
NPIPB4-204	ENST00000518761	PLB1	Q6P1J6	1458 aa		4.9	□□□□□ -1.62
NPIPB4-204	ENST00000518761		B4E1Z4	1266 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761		F8W031	263 aa	Predicted RBP	4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	ARVCF	O00192	962 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	KRIT1	O00522	736 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	PEX10	O60683	326 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	CRTAM	O95727	393 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	SDHB	P21912	280 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	FLT3	P36888	993 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	YBX1	P67809	324 aa	Known RBP	4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	JAG1	P78504	1218 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	ST5	P78524	1137 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	PABPC4	Q13310	644 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	MLANA	Q16655	118 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	FAM47C	Q5HY64	1035 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	ZC3H14	Q6PJT7	736 aa	Known RBP	4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	RPTN	Q6XPR3	784 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	BRAP	Q7Z569	592 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	ZNF605	Q86T29	641 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	NLRP10	Q86W26	655 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	SLC7A14	Q8TBB6	771 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	DIRC2	Q96SL1	478 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	INTS7	Q9NVH2	962 aa	Known RBP	4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	FBXL7	Q9UJT9	491 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	PCDHA9	Q9Y5H5	950 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	CD2AP	Q9Y5K6	639 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	UGGT2	Q9NYU1	1516 aa		4.9	□□□□□ -1.63
NPIPB4-204	ENST00000518761	CASKIN1	Q8WXD9	1431 aa		4.89	□□□□□ -1.63
NPIPB4-204	ENST00000518761	CLASP1	Q7Z460	1538 aa		4.89	□□□□□ -1.63
NPIPB4-204	ENST00000518761	ZC3H12D	A2A288	527 aa	Known RBP	4.89	□□□□□ -1.63
NPIPB4-204	ENST00000518761	NPTXR	O95502	500 aa		4.89	□□□□□ -1.63
NPIPB4-204	ENST00000518761	GNAT1	P11488	350 aa		4.89	□□□□□ -1.63
NPIPB4-204	ENST00000518761	TMEM132E	Q6IEE7	984 aa		4.89	□□□□□ -1.63
NPIPB4-204	ENST00000518761	PRR23B	Q6ZRT6	265 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms