RNA–Protein interactions for RNA: ENST00000517400.5

LINC00534-201, long intergenic non-protein coding RNA 534, humanhuman

TSL 2 BASIC

Gene LINC00534, Length 793 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00534-201ENST00000517400 PTPROQ16827 1216 aa6.17□□□□□ -1.42
LINC00534-201ENST00000517400 ZCCHC8Q6NZY4 707 aaKnown RBP6.17□□□□□ -1.42
LINC00534-201ENST00000517400 CNNM4Q6P4Q7 775 aa6.17□□□□□ -1.42
LINC00534-201ENST00000517400 CEP68Q76N32 757 aa6.17□□□□□ -1.42
LINC00534-201ENST00000517400 AHI1Q8N157 1196 aa6.17□□□□□ -1.42
LINC00534-201ENST00000517400 PPM1KQ8N3J5 372 aa6.17□□□□□ -1.42
LINC00534-201ENST00000517400 PCDH19Q8TAB3 1148 aa6.17□□□□□ -1.42
LINC00534-201ENST00000517400 ZCRB1Q8TBF4 217 aaKnown RBP6.17□□□□□ -1.42
LINC00534-201ENST00000517400 PLEKHO2Q8TD55 490 aa6.17□□□□□ -1.42
LINC00534-201ENST00000517400 TMEM169Q96HH4 297 aa6.17□□□□□ -1.42
LINC00534-201ENST00000517400 CHAMP1Q96JM3 812 aa6.17□□□□□ -1.42
LINC00534-201ENST00000517400 PLCD4Q9BRC7 762 aa6.17□□□□□ -1.42
LINC00534-201ENST00000517400 MTA3Q9BTC8 594 aa6.17□□□□□ -1.42
LINC00534-201ENST00000517400 PDLIM7Q9NR12 457 aa6.17□□□□□ -1.42
LINC00534-201ENST00000517400 IMPACTQ9P2X3 320 aa6.17□□□□□ -1.42
LINC00534-201ENST00000517400 GULP1Q9UBP9 304 aa6.17□□□□□ -1.42
LINC00534-201ENST00000517400 X6R8D5 127 aa6.17□□□□□ -1.42
LINC00534-201ENST00000517400 FAM47E-STBD1D6RA91 191 aa6.16□□□□□ -1.42
LINC00534-201ENST00000517400 PSPNO60542 156 aa6.16□□□□□ -1.42
LINC00534-201ENST00000517400 RAC2P15153 192 aa6.16□□□□□ -1.42
LINC00534-201ENST00000517400 GRK2P25098 689 aa6.16□□□□□ -1.42
LINC00534-201ENST00000517400 GRK3P35626 688 aa6.16□□□□□ -1.42
LINC00534-201ENST00000517400 ZNF460Q14592 562 aa6.16□□□□□ -1.42
LINC00534-201ENST00000517400 UBE2R2Q712K3 238 aaPredicted RBP6.16□□□□□ -1.42
LINC00534-201ENST00000517400 RNF180Q86T96 592 aa6.16□□□□□ -1.42
LINC00534-201ENST00000517400 NLRX1Q86UT6 975 aa6.16□□□□□ -1.42
LINC00534-201ENST00000517400 NLRP10Q86W26 655 aa6.16□□□□□ -1.42
LINC00534-201ENST00000517400 ANKLE2Q86XL3 938 aa6.16□□□□□ -1.42
LINC00534-201ENST00000517400 ZC3H7AQ8IWR0 971 aaKnown RBP6.16□□□□□ -1.42
LINC00534-201ENST00000517400 TRMT2BQ96GJ1 504 aaKnown RBP6.16□□□□□ -1.42
LINC00534-201ENST00000517400 CAAP1Q9H8G2 361 aa6.16□□□□□ -1.42
LINC00534-201ENST00000517400 CLDND1Q9NY35 253 aa6.16□□□□□ -1.42
LINC00534-201ENST00000517400 MARCH2Q9P0N8 246 aa6.16□□□□□ -1.42
LINC00534-201ENST00000517400 MADDQ8WXG6 1647 aa6.16□□□□□ -1.42
LINC00534-201ENST00000517400 CTTNBP2Q8WZ74 1663 aa6.16□□□□□ -1.42
LINC00534-201ENST00000517400 PCF11O94913 1555 aaKnown RBP6.15□□□□□ -1.42
LINC00534-201ENST00000517400 RIMS1Q86UR5 1692 aaKnown RBP6.15□□□□□ -1.42
LINC00534-201ENST00000517400 GSTA4O15217 222 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 FUCA1P04066 466 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 CKMP06732 381 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 MSL3P1P0C860 447 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 JMJD7P0C870 316 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 PRKCAP17252 672 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 GP2P55259 537 aaKnown RBP6.15□□□□□ -1.42
LINC00534-201ENST00000517400 TIGD5Q53EQ6 642 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 ABHD17CQ6PCB6 329 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 C16orf59Q7L2K0 433 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 RIOX2Q8IUF8 465 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 ABI1Q8IZP0 508 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 LZTR1Q8N653 840 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 FLAD1Q8NFF5 587 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 NUP43Q8NFH3 380 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 CHAC2Q8WUX2 184 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 MYLIPQ8WY64 445 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 FBXW5Q969U6 566 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 SHISA4Q96DD7 197 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 GPATCH3Q96I76 525 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 PUS7Q96PZ0 661 aaKnown RBP6.15□□□□□ -1.42
LINC00534-201ENST00000517400 ORAI3Q9BRQ5 295 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 CELF4Q9BZC1 486 aaKnown RBP6.15□□□□□ -1.42
LINC00534-201ENST00000517400 MTFR1LQ9H019 292 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 C19orf44Q9H6X5 657 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 IPPKQ9H8X2 491 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 RC3H2Q9HBD1 1191 aaKnown RBP6.15□□□□□ -1.42
LINC00534-201ENST00000517400 CRTAC1Q9NQ79 661 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 BTG4Q9NY30 223 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 PPARGC1AQ9UBK2 798 aaKnown RBP6.15□□□□□ -1.42
LINC00534-201ENST00000517400 RWDD3Q9Y3V2 267 aa6.15□□□□□ -1.42
LINC00534-201ENST00000517400 ABCA8O94911 1581 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 PLEKHD1A6NEE1 506 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 C22orf46C9J442 243 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 EFEMP2O95967 443 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 PNLIPP16233 465 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 IBSPP21815 317 aaPredicted RBP6.14□□□□□ -1.43
LINC00534-201ENST00000517400 SOX5P35711 763 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 AFMP43652 599 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 NEK4P51957 841 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 CYP4F8P98187 520 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 KIR3DS1Q14943 382 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 CFAP100Q494V2 611 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 FAM47CQ5HY64 1035 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 MROH9Q5TGP6 573 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 CDCA2Q69YH5 1023 aaPredicted RBP6.14□□□□□ -1.43
LINC00534-201ENST00000517400 DDX53Q86TM3 631 aaKnown RBP6.14□□□□□ -1.43
LINC00534-201ENST00000517400 TEX2Q8IWB9 1127 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 PCDH12Q9NPG4 1184 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 SAMD15Q9P1V8 674 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 GPR160Q9UJ42 338 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 NOP58Q9Y2X3 529 aaKnown RBP6.14□□□□□ -1.43
LINC00534-201ENST00000517400 COL4A3BPQ9Y5P4 624 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 ATP10BO94823 1461 aa6.14□□□□□ -1.43
LINC00534-201ENST00000517400 SRGAP2CP0DJJ0 459 aa6.13□□□□□ -1.43
LINC00534-201ENST00000517400 FPR2P25090 351 aa6.13□□□□□ -1.43
LINC00534-201ENST00000517400 TRHRP34981 398 aaPredicted RBP6.13□□□□□ -1.43
LINC00534-201ENST00000517400 ST5P78524 1137 aa6.13□□□□□ -1.43
LINC00534-201ENST00000517400 AMPD3Q01432 767 aa6.13□□□□□ -1.43
LINC00534-201ENST00000517400 CBLL1Q75N03 491 aa6.13□□□□□ -1.43
LINC00534-201ENST00000517400 KIF18BQ86Y91 864 aa6.13□□□□□ -1.43
LINC00534-201ENST00000517400 IGSF22Q8N9C0 903 aa6.13□□□□□ -1.43
LINC00534-201ENST00000517400 ABHD4Q8TB40 342 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms