RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 TCEA1P23193 301 aaKnown RBP-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 NR4A2P43354 598 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 PROK1P58294 105 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 TRIM26Q12899 539 aaPredicted RBP-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 SLC1A5Q15758 541 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 UBAP2Q5T6F2 1119 aaKnown RBP-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 ZDHHC20Q5W0Z9 365 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 TRMT10BQ6PF06 316 aaKnown RBP-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 ETV3LQ6ZN32 361 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 PTF1AQ7RTS3 328 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 BRAPQ7Z569 592 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 ZC3H18Q86VM9 953 aaKnown RBP-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 CMTR2Q8IYT2 770 aaKnown RBP-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 D2HGDHQ8N465 521 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 FAM26EQ8N5C1 309 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 CHRDQ9H2X0 955 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 C12orf65Q9H3J6 166 aaKnown RBP-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 ZNF576Q9H609 170 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 TMEM260Q9NX78 707 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 PLA2G3Q9NZ20 509 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 CROTQ9UKG9 612 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 HS3ST4Q9Y661 456 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 NDUFB9Q9Y6M9 179 aa-0.01□□□□□ -2.41
SNORA40.16-201ENST00000517238 FAM90A8PA6NJQ4 464 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 LRRN2O75325 713 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 PROP1O75360 226 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 LGR5O75473 907 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 CST3P01034 146 aaPredicted RBP-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 SYPP08247 313 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 SNRPB2P08579 225 aaKnown RBP-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 FAM90A13PP0C7W8 464 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 FAM90A24PP0C7X0 464 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 T-ENOLP0DO92 83 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 BRD2P25440 801 aaKnown RBP-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 ZEB1P37275 1124 aaPredicted RBP-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 CAP2P40123 477 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 ZAP70P43403 619 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 HTR6P50406 440 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 CSRP3P50461 194 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 SEC24CP53992 1094 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 DUSP8Q13202 625 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 ADAM9Q13443 819 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 BBS9Q3SYG4 887 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 TIGD2Q4W5G0 525 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 ZNF585BQ52M93 769 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 CEP85LQ5SZL2 805 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 JAMLQ86YT9 394 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 CCNJLQ8IV13 435 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 LILRA3Q8N6C8 439 aaPredicted RBP-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 SPRYD3Q8NCJ5 442 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 CTCFLQ8NI51 663 aaPredicted RBP-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 DDX17Q92841 729 aaKnown RBP-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 PEX11GQ96HA9 241 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 HINFPQ9BQA5 517 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 DCTN5Q9BTE1 182 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 C1QTNF5Q9BXJ0 243 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 ASCC2Q9H1I8 757 aaPredicted RBP-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 NRIP3Q9NQ35 241 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 PDLIM7Q9NR12 457 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 ERVK13-1Q9NX77 482 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 NUDT5Q9UKK9 219 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 TTF2Q9UNY4 1162 aaKnown RBP-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 BTBD3Q9Y2F9 522 aa-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 EPN1Q9Y6I3 576 aaPredicted RBP-0.02□□□□□ -2.41
SNORA40.16-201ENST00000517238 ZNF318Q5VUA4 2279 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 WIPF3A6NGB9 483 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 PIK3CDO00329 1044 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 SEC24DO94855 1032 aaPredicted RBP-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 LDLRP01130 860 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 KELP23276 732 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 RFC5P40937 340 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 SCNN1GP51170 649 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 JAM2P57087 298 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 CLDN10P78369 228 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 NFE2Q16621 373 aaPredicted RBP-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 XKR4Q5GH76 650 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 MORN5Q5VZ52 161 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 SPTY2D1Q68D10 685 aaPredicted RBP-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 PDZD3Q86UT5 571 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 HAPLN4Q86UW8 402 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 CABP7Q86V35 215 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 HID1Q8IV36 788 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 NUDT10Q8NFP7 164 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 ELMO3Q96BJ8 720 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 NUDT11Q96G61 164 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 CLIC6Q96NY7 704 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 SLITRK1Q96PX8 696 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 DPH2Q9BQC3 489 aaPredicted RBP-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 CDADC1Q9BWV3 514 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 LIN7BQ9HAP6 207 aa-0.03□□□□□ -2.41
SNORA40.16-201ENST00000517238 PALM3A6NDB9 673 aaPredicted RBP-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 MANSC4A6NHS7 340 aaPredicted RBP-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 C4orf47A7E2U8 309 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 TNFRSF10CO14798 259 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 RECQL4O94761 1208 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 ZNF205O95201 554 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 ZBTB7AO95365 584 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 CSF2RBP32927 897 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 VEGFCP49767 419 aa-0.04□□□□□ -2.42
SNORA40.16-201ENST00000517238 ETF1P62495 437 aaKnown RBP-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms