RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 ST7Q9NRC1 585 aa4.59□□□□□ -1.67
RNU6-1088P-201ENST00000516850 PCDHB4Q9Y5E5 795 aa4.59□□□□□ -1.67
RNU6-1088P-201ENST00000516850 ZNF536O15090 1300 aa4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 IQCA1LA6NCM1 817 aa4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 DDX3XO00571 662 aaKnown RBP eCLIP4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 ITGA1P56199 1179 aa4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 PPP2R2AP63151 447 aa4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 EFEMP1Q12805 493 aa4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 HSP90AA2PQ14568 343 aaPredicted RBP4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 TESK1Q15569 626 aa4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 MRM1Q6IN84 353 aaKnown RBP4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 ANKS3Q6ZW76 656 aa4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 NLRP10Q86W26 655 aa4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 MICAL1Q8TDZ2 1067 aa4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 CLIC6Q96NY7 704 aa4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 WRNIP1Q96S55 665 aa4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 DTLQ9NZJ0 730 aa4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 NUB1Q9Y5A7 615 aa4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 DUSP10Q9Y6W6 482 aa4.58□□□□□ -1.68
RNU6-1088P-201ENST00000516850 FGRP09769 529 aa4.57□□□□□ -1.68
RNU6-1088P-201ENST00000516850 LCP1P13796 627 aa4.57□□□□□ -1.68
RNU6-1088P-201ENST00000516850 MAP4K2Q12851 820 aa4.57□□□□□ -1.68
RNU6-1088P-201ENST00000516850 SURF1Q15526 300 aa4.57□□□□□ -1.68
RNU6-1088P-201ENST00000516850 ZXDCQ2QGD7 858 aaPredicted RBP4.57□□□□□ -1.68
RNU6-1088P-201ENST00000516850 USP53Q70EK8 1073 aa4.57□□□□□ -1.68
RNU6-1088P-201ENST00000516850 MCF2L2Q86YR7 1114 aa4.57□□□□□ -1.68
RNU6-1088P-201ENST00000516850 TRIM48Q8IWZ4 208 aa4.57□□□□□ -1.68
RNU6-1088P-201ENST00000516850 TXNDC5Q8NBS9 432 aaKnown RBP4.57□□□□□ -1.68
RNU6-1088P-201ENST00000516850 PHOSPHO1Q8TCT1 267 aa4.57□□□□□ -1.68
RNU6-1088P-201ENST00000516850 LCORQ96JN0 433 aaPredicted RBP4.57□□□□□ -1.68
RNU6-1088P-201ENST00000516850 SYT3Q9BQG1 590 aa4.57□□□□□ -1.68
RNU6-1088P-201ENST00000516850 IER2Q9BTL4 223 aa4.57□□□□□ -1.68
RNU6-1088P-201ENST00000516850 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
RNU6-1088P-201ENST00000516850 SMOC1Q9H4F8 434 aa4.57□□□□□ -1.68
RNU6-1088P-201ENST00000516850 L2HGDHQ9H9P8 463 aa4.57□□□□□ -1.68
RNU6-1088P-201ENST00000516850 A0A1W2PQU0 124 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 TCRBV5S2A0A599 114 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 ARNTLO00327 626 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 TADA3O75528 432 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 CR1LQ2VPA4 569 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 SLC10A6Q3KNW5 377 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 EMC4Q5J8M3 183 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 SLC35F1Q5T1Q4 408 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 GLB1LQ6UWU2 654 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 HHIPL2Q6UWX4 724 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 PLEKHH3Q7Z736 793 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 SLC43A3Q8NBI5 491 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 ARRDC4Q8NCT1 418 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 CHST13Q8NET6 341 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 HNRNPLLQ8WVV9 542 aaKnown RBP4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 SGSM3Q96HU1 749 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 LOXL4Q96JB6 756 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 TMEM209Q96SK2 561 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 TINF2Q9BSI4 451 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 GPR27Q9NS67 375 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 SMPD4Q9NXE4 827 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 MYOTQ9UBF9 498 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 FBXL7Q9UJT9 491 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 CROTQ9UKG9 612 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 INVSQ9Y283 1065 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 NPFFR2Q9Y5X5 522 aa4.56□□□□□ -1.68
RNU6-1088P-201ENST00000516850 C9orf118A6NHY6 69 aa4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 PLATP00750 562 aa4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 ITGB3P05106 788 aa4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 IL13P35225 146 aa4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 GRIA2P42262 883 aa4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 MAGEA10P43363 369 aaPredicted RBP4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 NFKB2Q00653 900 aa4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 DDR2Q16832 855 aa4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 CYP4F22Q6NT55 531 aa4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 TEPPQ6URK8 271 aa4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 RSPO2Q6UXX9 243 aaPredicted RBP4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 DPH6Q7L8W6 267 aa4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 ZSWIM3Q96MP5 696 aa4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 AARSD1Q9BTE6 412 aaKnown RBP4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 TRIM55Q9BYV6 548 aa4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 TMEM168Q9H0V1 697 aa4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 SLC6A20Q9NP91 592 aa4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 PPP1R1BQ9UD71 204 aaPredicted RBP4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 FTSJ1Q9UET6 329 aa4.55□□□□□ -1.68
RNU6-1088P-201ENST00000516850 U2SURPO15042 1029 aaKnown RBP4.54□□□□□ -1.68
RNU6-1088P-201ENST00000516850 INSRRP14616 1297 aa4.54□□□□□ -1.68
RNU6-1088P-201ENST00000516850 RBM25P49756 843 aaKnown RBP4.54□□□□□ -1.68
RNU6-1088P-201ENST00000516850 SPIRE1Q08AE8 756 aa4.54□□□□□ -1.68
RNU6-1088P-201ENST00000516850 ADAM9Q13443 819 aa4.54□□□□□ -1.68
RNU6-1088P-201ENST00000516850 TBC1D10BQ4KMP7 808 aaPredicted RBP4.54□□□□□ -1.68
RNU6-1088P-201ENST00000516850 PRR31Q5SQ13 230 aa4.54□□□□□ -1.68
RNU6-1088P-201ENST00000516850 DENND5AQ6IQ26 1287 aa4.54□□□□□ -1.68
RNU6-1088P-201ENST00000516850 GGNQ86UU5 652 aa4.54□□□□□ -1.68
RNU6-1088P-201ENST00000516850 LRRC47Q8N1G4 583 aaKnown RBP4.54□□□□□ -1.68
RNU6-1088P-201ENST00000516850 CELF2-AS1Q8N7Q2 184 aa4.54□□□□□ -1.68
RNU6-1088P-201ENST00000516850 DCAF4Q8WV16 495 aa4.54□□□□□ -1.68
RNU6-1088P-201ENST00000516850 C1orf159Q96HA4 380 aa4.54□□□□□ -1.68
RNU6-1088P-201ENST00000516850 PHF20Q9BVI0 1012 aa4.54□□□□□ -1.68
RNU6-1088P-201ENST00000516850 JAM3Q9BX67 310 aa4.54□□□□□ -1.68
RNU6-1088P-201ENST00000516850 JAG2Q9Y219 1238 aa4.54□□□□□ -1.68
RNU6-1088P-201ENST00000516850 SLC27A2O14975 620 aa4.53□□□□□ -1.68
RNU6-1088P-201ENST00000516850 PRODHO43272 600 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms