RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 SAR1BQ9Y6B6 198 aa11.96□□□□□ -0.5
TRIM41-209ENST00000515834 ATP10AO60312 1499 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 MAP3K7O43318 606 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 KRT1P04264 644 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 ATICP31939 592 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 CIITAP33076 1130 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 PSMC2P35998 433 aaKnown RBP11.95□□□□□ -0.5
TRIM41-209ENST00000515834 ARMCX2Q7L311 632 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 URGCPQ8TCY9 931 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 PI4KBQ9UBF8 816 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 KIAA0232Q92628 1395 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 TTC4O95801 387 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 NPR1P16066 1061 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 CACNB3P54284 484 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 STX1BP61266 288 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 ADCY1Q08828 1119 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 NSUN2Q08J23 767 aaKnown RBP eCLIP11.95□□□□□ -0.5
TRIM41-209ENST00000515834 TWF2Q6IBS0 349 aaKnown RBP11.95□□□□□ -0.5
TRIM41-209ENST00000515834 YAF2Q8IY57 180 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 AFG1LQ8WV93 481 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 TPCN1Q9ULQ1 816 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 GNAT1P11488 350 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 NR2F2P24468 414 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 ZBTB41Q5SVQ8 909 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 USP17L2Q6R6M4 530 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 NDUFAF2Q8N183 169 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 DYNLL2Q96FJ2 89 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 ERO1AQ96HE7 468 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 SERPINB13Q9UIV8 391 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 GOLGA8IPA6NC78 632 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 GOLGA8JA6NMD2 632 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 INPP5BP32019 993 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 SESN3P58005 492 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 ELF2Q15723 593 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 TBCCQ15814 346 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 SLC17A8Q8NDX2 589 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 OR8K1Q8NGG5 319 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 SPECC1L-ADORA2AF8WAN1 911 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 MCF2LO15068 1137 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 PDE8BO95263 885 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 HABP4Q5JVS0 413 aaKnown RBP11.95□□□□□ -0.5
TRIM41-209ENST00000515834 HSPH1Q92598 858 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 IFT122Q9HBG6 1241 aa11.95□□□□□ -0.5
TRIM41-209ENST00000515834 EEF1GP26641 437 aaKnown RBP11.94□□□□□ -0.5
TRIM41-209ENST00000515834 RASSF7Q02833 373 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 PTH1RQ03431 593 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 TRIM58Q8NG06 486 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 XPO4Q9C0E2 1151 aaKnown RBP11.94□□□□□ -0.5
TRIM41-209ENST00000515834 IMPACTQ9P2X3 320 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 ZHX2Q9Y6X8 837 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 USP17L8P0C7I0 530 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 RNF207Q6ZRF8 634 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 RAET1EQ8TD07 263 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.94□□□□□ -0.5
TRIM41-209ENST00000515834 NUP160Q12769 1436 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 PHEXP78562 749 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 TSR3Q9UJK0 312 aaKnown RBP11.94□□□□□ -0.5
TRIM41-209ENST00000515834 HNRNPCL2B2RXH8 293 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 HNRNPCL1O60812 293 aaKnown RBP11.94□□□□□ -0.5
TRIM41-209ENST00000515834 H2AFZP0C0S5 128 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 DNAJC24Q6P3W2 148 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 H2AFVQ71UI9 128 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 FAM186BQ8IYM0 893 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 WRNIP1Q96S55 665 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 WDR11Q9BZH6 1224 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 UBE2TQ9NPD8 197 aaPredicted RBP11.94□□□□□ -0.5
TRIM41-209ENST00000515834 PCDHA4Q9UN74 947 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 PIK3C2GO75747 1445 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 BASP1P80723 227 aaKnown RBP11.94□□□□□ -0.5
TRIM41-209ENST00000515834 RCN2Q14257 317 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 DCAF4L1Q3SXM0 396 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 MAP3K21Q5TCX8 1036 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 ANKRD13CQ8N6S4 541 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 PRPSAP2O60256 369 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 ANO4Q32M45 955 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 TEX2Q8IWB9 1127 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 TBCKQ8TEA7 893 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 CNOT6LQ96LI5 555 aaKnown RBP11.94□□□□□ -0.5
TRIM41-209ENST00000515834 KLHL14Q9P2G3 628 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 GDAQ9Y2T3 454 aa11.94□□□□□ -0.5
TRIM41-209ENST00000515834 TMEM94Q12767 1356 aa11.93□□□□□ -0.5
TRIM41-209ENST00000515834 OPHN1O60890 802 aa11.93□□□□□ -0.5
TRIM41-209ENST00000515834 RASSF2P50749 326 aa11.93□□□□□ -0.5
TRIM41-209ENST00000515834 RC3H1Q5TC82 1133 aaKnown RBP11.93□□□□□ -0.5
TRIM41-209ENST00000515834 TMC4Q7Z404 712 aa11.93□□□□□ -0.5
TRIM41-209ENST00000515834 LARP4BQ92615 738 aaKnown RBP11.93□□□□□ -0.5
TRIM41-209ENST00000515834 NUDCD1Q96RS6 583 aa11.93□□□□□ -0.5
TRIM41-209ENST00000515834 LBHD1Q9BQE6 289 aaPredicted RBP11.93□□□□□ -0.5
TRIM41-209ENST00000515834 MSTO1Q9BUK6 570 aa11.93□□□□□ -0.5
TRIM41-209ENST00000515834 HYOU1Q9Y4L1 999 aa11.93□□□□□ -0.5
TRIM41-209ENST00000515834 GTPBP6O43824 516 aaPredicted RBP11.93□□□□□ -0.5
TRIM41-209ENST00000515834 YWHAHQ04917 246 aaPredicted RBP11.93□□□□□ -0.5
TRIM41-209ENST00000515834 ARL13BQ3SXY8 428 aa11.93□□□□□ -0.5
TRIM41-209ENST00000515834 ZNF274Q96GC6 653 aaPredicted RBP11.93□□□□□ -0.5
TRIM41-209ENST00000515834 SUFUQ9UMX1 484 aa11.93□□□□□ -0.5
TRIM41-209ENST00000515834 STMN1P16949 149 aa11.93□□□□□ -0.5
TRIM41-209ENST00000515834 NFKBIAP25963 317 aa11.93□□□□□ -0.5
TRIM41-209ENST00000515834 CFAP61Q8NHU2 1237 aa11.93□□□□□ -0.5
TRIM41-209ENST00000515834 IQCDQ96DY2 449 aa11.93□□□□□ -0.5
TRIM41-209ENST00000515834 G3BP2Q9UN86 482 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms