RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 A0A087X0T9 212 aa14.27□□□□□ -0.13
PHF3-212ENST00000515594 E9PMD0 336 aa14.27□□□□□ -0.13
PHF3-212ENST00000515594 FAM228BP0C875 321 aa14.27□□□□□ -0.13
PHF3-212ENST00000515594 SEC24CP53992 1094 aa14.27□□□□□ -0.13
PHF3-212ENST00000515594 SF3A3Q12874 501 aaKnown RBP eCLIP14.27□□□□□ -0.13
PHF3-212ENST00000515594 CCDC40Q4G0X9 1142 aa14.27□□□□□ -0.13
PHF3-212ENST00000515594 PDXDC1Q6P996 788 aa14.27□□□□□ -0.13
PHF3-212ENST00000515594 RUFY1Q96T51 708 aa14.27□□□□□ -0.13
PHF3-212ENST00000515594 SETDB2Q96T68 719 aa14.27□□□□□ -0.13
PHF3-212ENST00000515594 A0A1W2PQJ5 194 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 ZNF233A6NK53 670 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 SHOX2O60902 331 aaPredicted RBP14.26□□□□□ -0.13
PHF3-212ENST00000515594 TAL1P17542 331 aaPredicted RBP14.26□□□□□ -0.13
PHF3-212ENST00000515594 GNAQP50148 359 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 TTBK2Q6IQ55 1244 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 CCDC70Q6NSX1 233 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 ZNF662Q6ZS27 426 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 TSGA10Q9BZW7 698 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 COL22A1Q8NFW1 1626 aaPredicted RBP14.26□□□□□ -0.13
PHF3-212ENST00000515594 F8W031 263 aaPredicted RBP14.26□□□□□ -0.13
PHF3-212ENST00000515594 EIF3HO15372 352 aaKnown RBP eCLIP14.26□□□□□ -0.132e-6■■■□□ 16.4
PHF3-212ENST00000515594 NNTQ13423 1086 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 ASTE1Q2TB18 679 aaPredicted RBP14.26□□□□□ -0.13
PHF3-212ENST00000515594 UNC13DQ70J99 1090 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 TADA2BQ86TJ2 420 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 AMOTL1Q8IY63 956 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 RNPC3Q96LT9 517 aaKnown RBP14.26□□□□□ -0.13
PHF3-212ENST00000515594 IKZF4Q9H2S9 585 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 MYH4Q9Y623 1939 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 GNPATO15228 680 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 MYL1P05976 194 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 PAFAH1B1P43034 410 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 PPFIA1Q13136 1202 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 FAM83BQ5T0W9 1011 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 AK8Q96MA6 479 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 MTMR9Q96QG7 549 aa14.26□□□□□ -0.13
PHF3-212ENST00000515594 TM4SF1P30408 202 aa14.25□□□□□ -0.13
PHF3-212ENST00000515594 HPDP32754 393 aaPredicted RBP14.25□□□□□ -0.13
PHF3-212ENST00000515594 EPHB4P54760 987 aa14.25□□□□□ -0.13
PHF3-212ENST00000515594 AMPD3Q01432 767 aa14.25□□□□□ -0.13
PHF3-212ENST00000515594 COASYQ13057 564 aa14.25□□□□□ -0.13
PHF3-212ENST00000515594 FIGNQ5HY92 759 aa14.25□□□□□ -0.13
PHF3-212ENST00000515594 IQCEQ6IPM2 695 aa14.25□□□□□ -0.13
PHF3-212ENST00000515594 TEX11Q8IYF3 940 aa14.25□□□□□ -0.13
PHF3-212ENST00000515594 CASKIN2Q8WXE0 1202 aa14.25□□□□□ -0.13
PHF3-212ENST00000515594 LAD1O00515 517 aa14.25□□□□□ -0.13
PHF3-212ENST00000515594 HSF2BPO75031 334 aa14.25□□□□□ -0.13
PHF3-212ENST00000515594 TCP1P17987 556 aaKnown RBP14.25□□□□□ -0.13
PHF3-212ENST00000515594 HNRNPH3P31942 346 aaKnown RBP14.25□□□□□ -0.13
PHF3-212ENST00000515594 STAT3P40763 770 aa14.25□□□□□ -0.13
PHF3-212ENST00000515594 KIAA0753Q2KHM9 967 aa14.25□□□□□ -0.13
PHF3-212ENST00000515594 SHROOM1Q2M3G4 852 aaPredicted RBP14.25□□□□□ -0.13
PHF3-212ENST00000515594 RAD54LQ92698 747 aa14.25□□□□□ -0.13
PHF3-212ENST00000515594 NOX5Q96PH1 765 aa14.25□□□□□ -0.13
PHF3-212ENST00000515594 AP1M1Q9BXS5 423 aa14.25□□□□□ -0.13
PHF3-212ENST00000515594 EBAG9O00559 213 aa14.24□□□□□ -0.13
PHF3-212ENST00000515594 NDUFAB1O14561 156 aa14.24□□□□□ -0.13
PHF3-212ENST00000515594 PPP1R11O60927 126 aaPredicted RBP14.24□□□□□ -0.13
PHF3-212ENST00000515594 GNA11P29992 359 aa14.24□□□□□ -0.13
PHF3-212ENST00000515594 SLC30A10Q6XR72 485 aa14.24□□□□□ -0.13
PHF3-212ENST00000515594 SH3GL2Q99962 352 aa14.24□□□□□ -0.13
PHF3-212ENST00000515594 RTFDC1Q9BY42 306 aaPredicted RBP14.24□□□□□ -0.13
PHF3-212ENST00000515594 LRRC4CQ9HCJ2 640 aa14.24□□□□□ -0.13
PHF3-212ENST00000515594 SPATA31A1Q5TZJ5 1347 aa14.24□□□□□ -0.13
PHF3-212ENST00000515594 CASP5P51878 434 aa14.24□□□□□ -0.13
PHF3-212ENST00000515594 CDK17Q00537 523 aa14.24□□□□□ -0.13
PHF3-212ENST00000515594 PPM1EQ8WY54 764 aa14.24□□□□□ -0.13
PHF3-212ENST00000515594 PIK3R5Q8WYR1 880 aa14.24□□□□□ -0.13
PHF3-212ENST00000515594 CUEDC2Q9H467 287 aa14.24□□□□□ -0.13
PHF3-212ENST00000515594 POTEB3A0JP26 581 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 POTECB2RU33 542 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 RAD51CO43502 376 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 MARCH6O60337 910 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 FAM98CQ17RN3 349 aaKnown RBP14.23□□□□□ -0.13
PHF3-212ENST00000515594 CHADLQ6NUI6 762 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 POTEBQ6S5H4 581 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 CLEC4GQ6UXB4 293 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 ANKS1AQ92625 1134 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 SPZ1Q9BXG8 430 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 MYO1FO00160 1098 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 PDHBP11177 359 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 GUF1Q8N442 669 aaKnown RBP14.23□□□□□ -0.13
PHF3-212ENST00000515594 DNAJC19Q96DA6 116 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 DDX60LQ5H9U9 1706 aaKnown RBP14.23□□□□□ -0.13
PHF3-212ENST00000515594 RREB1Q92766 1687 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 IRS2Q9Y4H2 1338 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 MEIS1O00470 390 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 IBSPP21815 317 aaPredicted RBP14.23□□□□□ -0.13
PHF3-212ENST00000515594 SNAP25P60880 206 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 HLTFQ14527 1009 aaKnown RBP eCLIP14.23□□□□□ -0.136e-10■□□□□ 10.6
PHF3-212ENST00000515594 SFMBT2Q5VUG0 894 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 MAATS1Q7Z4T9 603 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 MYOCDQ8IZQ8 938 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 HAS1Q92839 578 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 PANK4Q9NVE7 773 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 KIAA1024Q9UPX6 916 aa14.23□□□□□ -0.13
PHF3-212ENST00000515594 MYH7BA7E2Y1 1941 aa14.22□□□□□ -0.13
PHF3-212ENST00000515594 USP17L15C9J2P7 530 aa14.22□□□□□ -0.13
PHF3-212ENST00000515594 USP17L13C9JLJ4 530 aa14.22□□□□□ -0.13
PHF3-212ENST00000515594 USP17L11C9JVI0 530 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms