RNA–Protein interactions for RNA: ENST00000515417.5

RACK1-234, Transcript of receptor for activated C kinase 1, humanhuman

TSL 3

Gene RACK1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-234ENST00000515417 PCSK9Q8NBP7 692 aaKnown RBP11.13□□□□□ -0.63
RACK1-234ENST00000515417 GTF3C6Q969F1 213 aa11.13□□□□□ -0.63
RACK1-234ENST00000515417 UIMC1Q96RL1 719 aa11.13□□□□□ -0.63
RACK1-234ENST00000515417 TSEN34Q9BSV6 310 aaKnown RBP11.13□□□□□ -0.63
RACK1-234ENST00000515417 UBE2OQ9C0C9 1292 aaKnown RBP11.13□□□□□ -0.63
RACK1-234ENST00000515417 STARD7Q9NQZ5 370 aa11.13□□□□□ -0.63
RACK1-234ENST00000515417 GJB4Q9NTQ9 266 aa11.13□□□□□ -0.63
RACK1-234ENST00000515417 TELO2Q9Y4R8 837 aa11.13□□□□□ -0.63
RACK1-234ENST00000515417 SPTBN5Q9NRC6 3674 aaKnown RBP11.13□□□□□ -0.63
RACK1-234ENST00000515417 PRUNE2Q8WUY3 3088 aa11.12□□□□□ -0.63
RACK1-234ENST00000515417 MOXD2PA6NHM9 499 aa11.12□□□□□ -0.63
RACK1-234ENST00000515417 NKRFO15226 690 aaKnown RBP eCLIP11.12□□□□□ -0.63
RACK1-234ENST00000515417 GGPS1O95749 300 aa11.12□□□□□ -0.63
RACK1-234ENST00000515417 ITGB5P18084 799 aa11.12□□□□□ -0.63
RACK1-234ENST00000515417 NKX3-2P78367 333 aa11.12□□□□□ -0.63
RACK1-234ENST00000515417 SP4Q02446 784 aa11.12□□□□□ -0.63
RACK1-234ENST00000515417 CPLX2Q6PUV4 134 aaKnown RBP11.12□□□□□ -0.63
RACK1-234ENST00000515417 SH3RF1Q7Z6J0 888 aa11.12□□□□□ -0.63
RACK1-234ENST00000515417 TDHQ8IZJ6 230 aa11.12□□□□□ -0.63
RACK1-234ENST00000515417 REXO1Q8N1G1 1221 aaKnown RBP11.12□□□□□ -0.63
RACK1-234ENST00000515417 CYP2W1Q8TAV3 490 aa11.12□□□□□ -0.63
RACK1-234ENST00000515417 TBC1D32Q96NH3 1257 aa11.12□□□□□ -0.63
RACK1-234ENST00000515417 GUCD1Q96NT3 240 aa11.12□□□□□ -0.63
RACK1-234ENST00000515417 INPP4AQ96PE3 977 aaPredicted RBP11.12□□□□□ -0.63
RACK1-234ENST00000515417 ZMYND12Q9H0C1 365 aa11.12□□□□□ -0.63
RACK1-234ENST00000515417 PRDM5Q9NQX1 630 aaPredicted RBP11.12□□□□□ -0.63
RACK1-234ENST00000515417 ORC3Q9UBD5 711 aaPredicted RBP11.12□□□□□ -0.63
RACK1-234ENST00000515417 KCNJ14Q9UNX9 436 aa11.12□□□□□ -0.63
RACK1-234ENST00000515417 STXBP5LQ9Y2K9 1186 aa11.12□□□□□ -0.63
RACK1-234ENST00000515417 Q9Y3F1 56 aa11.12□□□□□ -0.63
RACK1-234ENST00000515417 GRIN2DO15399 1336 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 A0A0U1RQG5 324 aaPredicted RBP11.11□□□□□ -0.63
RACK1-234ENST00000515417 ESYT2A0FGR8 921 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 RBAK-RBAKDNI3L0D1 243 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 ZEB2O60315 1214 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 CDKL5O76039 1030 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 CD2BP2O95400 341 aaKnown RBP11.11□□□□□ -0.63
RACK1-234ENST00000515417 DEXIO95424 95 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 MMP3P08254 477 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 ZNF286BP0CG31 522 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 CLK2P49760 499 aaKnown RBP11.11□□□□□ -0.63
RACK1-234ENST00000515417 CPT1AP50416 773 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 NLRP5P59047 1200 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 SNX17Q15036 470 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 LRIT3Q3SXY7 679 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 CELF3Q5SZQ8 465 aaKnown RBP11.11□□□□□ -0.63
RACK1-234ENST00000515417 CCDC83Q8IWF9 413 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 DHX37Q8IY37 1157 aaKnown RBP11.11□□□□□ -0.63
RACK1-234ENST00000515417 NSUN7Q8NE18 718 aaKnown RBP11.11□□□□□ -0.63
RACK1-234ENST00000515417 CCDC148Q8NFR7 591 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 CCDC12Q8WUD4 166 aaPredicted RBP11.11□□□□□ -0.63
RACK1-234ENST00000515417 GLT1D1Q96MS3 346 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 SPATA33Q96N06 139 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 UPF2Q9HAU5 1272 aaKnown RBP11.11□□□□□ -0.63
RACK1-234ENST00000515417 C6orf50Q9HD87 102 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 PDLIM7Q9NR12 457 aa11.11□□□□□ -0.63
RACK1-234ENST00000515417 CDH23Q9H251 3354 aa11.1□□□□□ -0.63
RACK1-234ENST00000515417 A6NJR5 290 aa11.1□□□□□ -0.63
RACK1-234ENST00000515417 SPATA31C2B4DYI2 1134 aa11.1□□□□□ -0.63
RACK1-234ENST00000515417 ATP9AO75110 1047 aa11.1□□□□□ -0.63
RACK1-234ENST00000515417 FDPSP14324 419 aaKnown RBP11.1□□□□□ -0.63
RACK1-234ENST00000515417 SREBF1P36956 1147 aa11.1□□□□□ -0.63
RACK1-234ENST00000515417 ARHGAP4P98171 946 aa11.1□□□□□ -0.63
RACK1-234ENST00000515417 PURAQ00577 322 aaKnown RBP11.1□□□□□ -0.63
RACK1-234ENST00000515417 RABEP1Q15276 862 aa11.1□□□□□ -0.63
RACK1-234ENST00000515417 NPY5RQ15761 445 aa11.1□□□□□ -0.63
RACK1-234ENST00000515417 GNPTABQ3T906 1256 aa11.1□□□□□ -0.63
RACK1-234ENST00000515417 XRRA1Q6P2D8 792 aa11.1□□□□□ -0.63
RACK1-234ENST00000515417 CYFIP1Q7L576 1253 aa11.1□□□□□ -0.63
RACK1-234ENST00000515417 BACH2Q9BYV9 841 aa11.1□□□□□ -0.63
RACK1-234ENST00000515417 EHMT1Q9H9B1 1298 aa11.1□□□□□ -0.63
RACK1-234ENST00000515417 LIMCH1Q9UPQ0 1083 aa11.1□□□□□ -0.63
RACK1-234ENST00000515417 UBIAD1Q9Y5Z9 338 aa11.1□□□□□ -0.63
RACK1-234ENST00000515417 ELP1O95163 1332 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 STK36Q9NRP7 1315 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 TRIM43BA6NCK2 446 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 ARVCFO00192 962 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 FIBPO43427 364 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 FOSP01100 380 aaPredicted RBP11.09□□□□□ -0.63
RACK1-234ENST00000515417 ARP10275 920 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 GNA11P29992 359 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 ICAM3P32942 547 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 AP3B2Q13367 1082 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 ITGA7Q13683 1181 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 LAMC2Q13753 1193 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 NBPF20Q3BBV1 942 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 HSDL1Q3SXM5 330 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 BRDTQ58F21 947 aaPredicted RBP11.09□□□□□ -0.63
RACK1-234ENST00000515417 MYSM1Q5VVJ2 828 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 NLRX1Q86UT6 975 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 OXER1Q8TDS5 423 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 KAT2BQ92831 832 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 TRIM43Q96BQ3 446 aaPredicted RBP11.09□□□□□ -0.63
RACK1-234ENST00000515417 MTG1Q9BT17 334 aaPredicted RBP11.09□□□□□ -0.63
RACK1-234ENST00000515417 ALG1Q9BT22 464 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 GLT8D2Q9H1C3 349 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 TRPV6Q9H1D0 765 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 MLXIPQ9HAP2 919 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 SH3GLB2Q9NR46 395 aa11.09□□□□□ -0.63
RACK1-234ENST00000515417 POLR3EQ9NVU0 708 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms