RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 ZBTB22O15209 634 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 PARNO95453 639 aaKnown RBP3.92□□□□□ -1.78
CHD1-211ENST00000514344 CTSHP09668 335 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 UQCRFS1P1P0C7P4 283 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 LINC00271P0C7V0 271 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 ALAS1P13196 640 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 ATF7P17544 494 aaPredicted RBP3.92□□□□□ -1.78
CHD1-211ENST00000514344 NCLP19338 710 aaKnown RBP3.92□□□□□ -1.78
CHD1-211ENST00000514344 THPOP40225 353 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 PPP2R5BQ15173 497 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 ZC3H14Q6PJT7 736 aaKnown RBP3.92□□□□□ -1.78
CHD1-211ENST00000514344 DHX37Q8IY37 1157 aaKnown RBP3.92□□□□□ -1.78
CHD1-211ENST00000514344 SIX5Q8N196 739 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 VN1R2Q8NFZ6 395 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 SUSD6Q92537 303 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 ALG1Q9BT22 464 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 LMAN2LQ9H0V9 348 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 SLC38A10Q9HBR0 1119 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 COPRSQ9NQ92 184 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 HDAC6Q9UBN7 1215 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 LIMD1Q9UGP4 676 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 ANGPTL2Q9UKU9 493 aa3.92□□□□□ -1.78
CHD1-211ENST00000514344 F5H6K3 240 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 ATP2A1O14983 1001 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 SRGAP3O43295 1099 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 ITGB1P05556 798 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 RB1P06400 928 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 WEE2P0C1S8 567 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 SDHBP21912 280 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 RFX1P22670 979 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 SNAP25P60880 206 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 KLRC3Q07444 240 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 BTG3Q14201 252 aaPredicted RBP3.91□□□□□ -1.78
CHD1-211ENST00000514344 VARS2Q5ST30 1063 aaKnown RBP3.91□□□□□ -1.78
CHD1-211ENST00000514344 LLGL2Q6P1M3 1020 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 TRAF7Q6Q0C0 670 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 C7orf31Q8N865 590 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 POF1BQ8WVV4 589 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 VTA1Q9NP79 307 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 FBXL21Q9UKT6 434 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 ZMIZ1Q9ULJ6 1067 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 IL16Q14005 1332 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 ADGRA3Q8IWK6 1321 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 A6NJR5 290 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 CYSRT1A8MQ03 144 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 RSPH10B2B2RC85 870 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 NDUFB10O96000 172 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 DCNP07585 359 aaKnown RBP3.91□□□□□ -1.78
CHD1-211ENST00000514344 RSPH10BP0C881 870 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 NPR3P17342 541 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 TECP42680 631 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 PTPN11Q06124 597 aaPredicted RBP3.91□□□□□ -1.78
CHD1-211ENST00000514344 IKQ13123 557 aaPredicted RBP3.91□□□□□ -1.78
CHD1-211ENST00000514344 PLEKHG4Q58EX7 1191 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 MUM1L1Q5H9M0 696 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 CCDC158Q5M9N0 1113 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 SUMF1Q8NBK3 374 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 AFG1LQ8WV93 481 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 TRERF1Q96PN7 1200 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 NEK1Q96PY6 1258 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 DBNDD2Q9BQY9 259 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 POMKQ9H5K3 350 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 ANTXR1Q9H6X2 564 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 KANSL2Q9H9L4 492 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 ERVK-5Q9HDB9 667 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.91□□□□□ -1.78
CHD1-211ENST00000514344 GTF2IRD1Q9UHL9 959 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 NR2E1Q9Y466 385 aa3.91□□□□□ -1.78
CHD1-211ENST00000514344 KALRNO60229 2985 aa3.9□□□□□ -1.78
CHD1-211ENST00000514344 KINO60870 393 aaKnown RBP3.9□□□□□ -1.78
CHD1-211ENST00000514344 TXNP10599 105 aaKnown RBP3.9□□□□□ -1.78
CHD1-211ENST00000514344 IBSPP21815 317 aaPredicted RBP3.9□□□□□ -1.78
CHD1-211ENST00000514344 LMNB2Q03252 620 aa3.9□□□□□ -1.78
CHD1-211ENST00000514344 KLHL23Q8NBE8 558 aa3.9□□□□□ -1.78
CHD1-211ENST00000514344 RIOK1Q9BRS2 568 aaKnown RBP3.9□□□□□ -1.78
CHD1-211ENST00000514344 RTKNQ9BST9 563 aa3.9□□□□□ -1.78
CHD1-211ENST00000514344 BCL11AQ9H165 835 aa3.9□□□□□ -1.78
CHD1-211ENST00000514344 DCP1AQ9NPI6 582 aaPredicted RBP3.9□□□□□ -1.78
CHD1-211ENST00000514344 CYP39A1Q9NYL5 469 aa3.9□□□□□ -1.78
CHD1-211ENST00000514344 EMSYQ7Z589 1322 aa3.9□□□□□ -1.78
CHD1-211ENST00000514344 IGSF10Q6WRI0 2623 aa3.9□□□□□ -1.78
CHD1-211ENST00000514344 BAZ2AQ9UIF9 1905 aaKnown RBP3.9□□□□□ -1.79
CHD1-211ENST00000514344 MAGEB6P1A0A0J9YX57 407 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.9□□□□□ -1.79
CHD1-211ENST00000514344 TTLL13PA6NNM8 815 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 C1QTNF9BB2RNN3 333 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 C1QTNF9P0C862 333 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 ZNF286BP0CG31 522 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 CDK8P49336 464 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 PAN2Q504Q3 1202 aaKnown RBP3.9□□□□□ -1.79
CHD1-211ENST00000514344 LRRC47Q8N1G4 583 aaKnown RBP3.9□□□□□ -1.79
CHD1-211ENST00000514344 SPPL3Q8TCT6 385 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 SEPT8Q92599 483 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 KAT2BQ92831 832 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 RTP3Q9BQQ7 232 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 CRNKL1Q9BZJ0 848 aaKnown RBP3.9□□□□□ -1.79
CHD1-211ENST00000514344 SWAP70Q9UH65 585 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 DACH1Q9UI36 760 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 RWDD3Q9Y3V2 267 aa3.9□□□□□ -1.79
CHD1-211ENST00000514344 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms