RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 SNX17Q15036 470 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 RABEP1Q15276 862 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 PCNX4Q63HM2 1172 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 CCSAPQ6IQ19 270 aaPredicted RBP9.39□□□□□ -0.91
NEDD4-210ENST00000513957 GALNT17Q6IS24 598 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 VSIG10LQ86VR7 867 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 TBC1D5Q92609 795 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 EMID1Q96A84 441 aaPredicted RBP9.39□□□□□ -0.91
NEDD4-210ENST00000513957 CDHR1Q96JP9 859 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 PURBQ96QR8 312 aaKnown RBP9.39□□□□□ -0.91
NEDD4-210ENST00000513957 ZMYND12Q9H0C1 365 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 AP5M1Q9H0R1 490 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 LTBP2Q14767 1821 aa9.38□□□□□ -0.91
NEDD4-210ENST00000513957 MAFGO15525 162 aa9.38□□□□□ -0.91
NEDD4-210ENST00000513957 PGK1P00558 417 aa9.38□□□□□ -0.91
NEDD4-210ENST00000513957 C6orf222P0C671 652 aaPredicted RBP9.38□□□□□ -0.91
NEDD4-210ENST00000513957 TXNP10599 105 aaKnown RBP9.38□□□□□ -0.91
NEDD4-210ENST00000513957 SMPD1P17405 629 aa9.38□□□□□ -0.91
NEDD4-210ENST00000513957 XBP1P17861 261 aa9.38□□□□□ -0.91
NEDD4-210ENST00000513957 ICAM3P32942 547 aa9.38□□□□□ -0.91
NEDD4-210ENST00000513957 CLK2P49760 499 aaKnown RBP9.38□□□□□ -0.91
NEDD4-210ENST00000513957 FSCN1Q16658 493 aaKnown RBP9.38□□□□□ -0.91
NEDD4-210ENST00000513957 GJC2Q5T442 439 aaPredicted RBP9.38□□□□□ -0.91
NEDD4-210ENST00000513957 PRPF38BQ5VTL8 546 aaKnown RBP9.38□□□□□ -0.91
NEDD4-210ENST00000513957 CCDC62Q6P9F0 684 aa9.38□□□□□ -0.91
NEDD4-210ENST00000513957 NOL8Q76FK4 1167 aaKnown RBP9.38□□□□□ -0.91
NEDD4-210ENST00000513957 EEPD1Q7L9B9 569 aa9.38□□□□□ -0.91
NEDD4-210ENST00000513957 FCHSD1Q86WN1 690 aa9.38□□□□□ -0.91
NEDD4-210ENST00000513957 DIS3LQ8TF46 1054 aaKnown RBP9.38□□□□□ -0.91
NEDD4-210ENST00000513957 PIBF1Q8WXW3 757 aa9.38□□□□□ -0.91
NEDD4-210ENST00000513957 WASF1Q92558 559 aa9.38□□□□□ -0.91
NEDD4-210ENST00000513957 GPKOWQ92917 476 aaPredicted RBP eCLIP9.38□□□□□ -0.91
NEDD4-210ENST00000513957 GLT1D1Q96MS3 346 aa9.38□□□□□ -0.91
NEDD4-210ENST00000513957 INPP4AQ96PE3 977 aaPredicted RBP9.38□□□□□ -0.91
NEDD4-210ENST00000513957 C6orf50Q9HD87 102 aa9.38□□□□□ -0.91
NEDD4-210ENST00000513957 POLR3EQ9NVU0 708 aa9.38□□□□□ -0.91
NEDD4-210ENST00000513957 MRVI1Q9Y6F6 885 aa9.38□□□□□ -0.91
NEDD4-210ENST00000513957 DOCK5Q9H7D0 1870 aa9.38□□□□□ -0.91
NEDD4-210ENST00000513957 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.37□□□□□ -0.91
NEDD4-210ENST00000513957 A0A1W2PQ45 241 aaPredicted RBP9.37□□□□□ -0.91
NEDD4-210ENST00000513957 A0A1W2PQY0 241 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 SMCO2A6NFE2 343 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 ADCY6O43306 1168 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 FIBPO43427 364 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 ST18O60284 1047 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 EVI5O60447 810 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 GH1P01241 217 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 MCM2P49736 904 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 ACLYP53396 1101 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 CCT2P78371 535 aaKnown RBP9.37□□□□□ -0.91
NEDD4-210ENST00000513957 SCRN1Q12765 414 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 PKN1Q16512 942 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 GNASQ5JWF2 1037 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 FOXD4L5Q5VV16 416 aaPredicted RBP9.37□□□□□ -0.91
NEDD4-210ENST00000513957 ANO1Q5XXA6 986 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 USP17L6PQ6QN14 398 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 NLRX1Q86UT6 975 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 REXO1Q8N1G1 1221 aaKnown RBP9.37□□□□□ -0.91
NEDD4-210ENST00000513957 GIMAP8Q8ND71 665 aaPredicted RBP9.37□□□□□ -0.91
NEDD4-210ENST00000513957 FOXD4L4Q8WXT5 416 aaPredicted RBP9.37□□□□□ -0.91
NEDD4-210ENST00000513957 PHKBQ93100 1093 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 GTF3C6Q969F1 213 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 GPRASP2Q96D09 838 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 ZSCAN31Q96LW9 406 aaPredicted RBP9.37□□□□□ -0.91
NEDD4-210ENST00000513957 SENP7Q9BQF6 1050 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 SLC26A6Q9BXS9 759 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 SENP6Q9GZR1 1112 aaPredicted RBP9.37□□□□□ -0.91
NEDD4-210ENST00000513957 STARD7Q9NQZ5 370 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 PDGFCQ9NRA1 345 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 SH2B1Q9NRF2 756 aaPredicted RBP9.37□□□□□ -0.91
NEDD4-210ENST00000513957 DDX41Q9UJV9 622 aaKnown RBP9.37□□□□□ -0.91
NEDD4-210ENST00000513957 TPCN1Q9ULQ1 816 aa9.37□□□□□ -0.91
NEDD4-210ENST00000513957 A0A0U1RQG5 324 aaPredicted RBP9.36□□□□□ -0.91
NEDD4-210ENST00000513957 hCG_1642624A0A1W2PR95 340 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 CTAGE5O15320 804 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 ASGR1P07306 291 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 MYCLP12524 364 aaPredicted RBP9.36□□□□□ -0.91
NEDD4-210ENST00000513957 SREBF1P36956 1147 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 CLCN6P51797 869 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 LAMC2Q13753 1193 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 NEDD9Q14511 834 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 KCNA10Q16322 511 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 TYW1BQ6NUM6 668 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 SLC39A5Q6ZMH5 540 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 SEPT14Q6ZU15 432 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 NIPA1Q7RTP0 329 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 DAGLBQ8NCG7 672 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 OR6J1Q8NGC5 347 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 PPTC7Q8NI37 304 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 DPF3Q92784 378 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 LENG1Q96BZ8 264 aaPredicted RBP9.36□□□□□ -0.91
NEDD4-210ENST00000513957 TBC1D32Q96NH3 1257 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 TOX2Q96NM4 488 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 KIF2CQ99661 725 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 LLPHQ9BRT6 129 aaKnown RBP9.36□□□□□ -0.91
NEDD4-210ENST00000513957 ANO3Q9BYT9 981 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 NCOA5Q9HCD5 579 aaKnown RBP9.36□□□□□ -0.91
NEDD4-210ENST00000513957 PCDHA6Q9UN73 950 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 LIMCH1Q9UPQ0 1083 aa9.36□□□□□ -0.91
NEDD4-210ENST00000513957 PCDHA8Q9Y5H6 950 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms