RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 FYB2Q5VWT5 728 aa6.04□□□□□ -1.44
CLDND1-228ENST00000513873 PMFBP1Q8TBY8 1022 aa6.04□□□□□ -1.44
CLDND1-228ENST00000513873 MICAL1Q8TDZ2 1067 aa6.04□□□□□ -1.44
CLDND1-228ENST00000513873 HHIPL1Q96JK4 782 aa6.04□□□□□ -1.44
CLDND1-228ENST00000513873 APEX2Q9UBZ4 518 aa6.04□□□□□ -1.44
CLDND1-228ENST00000513873 GPR55Q9Y2T6 319 aaPredicted RBP6.04□□□□□ -1.44
CLDND1-228ENST00000513873 DIP2AQ14689 1571 aa6.04□□□□□ -1.44
CLDND1-228ENST00000513873 KDM5AP29375 1690 aaKnown RBP6.04□□□□□ -1.44
CLDND1-228ENST00000513873 STXBP3O00186 592 aa6.03□□□□□ -1.44
CLDND1-228ENST00000513873 AURKAO14965 403 aa6.03□□□□□ -1.44
CLDND1-228ENST00000513873 NRDCO43847 1150 aa6.03□□□□□ -1.44
CLDND1-228ENST00000513873 IFNGR1P15260 489 aa6.03□□□□□ -1.44
CLDND1-228ENST00000513873 KCNJ6P48051 423 aa6.03□□□□□ -1.44
CLDND1-228ENST00000513873 RBL2Q08999 1139 aa6.03□□□□□ -1.44
CLDND1-228ENST00000513873 RTP2Q5QGT7 225 aa6.03□□□□□ -1.44
CLDND1-228ENST00000513873 GTF2IRD2BQ6EKJ0 949 aa6.03□□□□□ -1.44
CLDND1-228ENST00000513873 RCSD1Q6JBY9 416 aa6.03□□□□□ -1.44
CLDND1-228ENST00000513873 SYDE1Q6ZW31 735 aaPredicted RBP6.03□□□□□ -1.44
CLDND1-228ENST00000513873 GTF2IRD2Q86UP8 949 aa6.03□□□□□ -1.44
CLDND1-228ENST00000513873 TRIM59Q8IWR1 403 aa6.03□□□□□ -1.44
CLDND1-228ENST00000513873 CCDC140Q96MF4 163 aa6.03□□□□□ -1.44
CLDND1-228ENST00000513873 PTCHD1Q96NR3 888 aa6.03□□□□□ -1.44
CLDND1-228ENST00000513873 G6PC3Q9BUM1 346 aa6.03□□□□□ -1.44
CLDND1-228ENST00000513873 SLC6A17Q9H1V8 727 aa6.03□□□□□ -1.44
CLDND1-228ENST00000513873 ERVK13-1Q9NX77 482 aa6.03□□□□□ -1.44
CLDND1-228ENST00000513873 CHD2O14647 1828 aaKnown RBP6.02□□□□□ -1.45
CLDND1-228ENST00000513873 CEP350Q5VT06 3117 aa6.02□□□□□ -1.45
CLDND1-228ENST00000513873 NCOA3Q9Y6Q9 1424 aa6.02□□□□□ -1.45
CLDND1-228ENST00000513873 FADS2P1A8MWK0 482 aa6.02□□□□□ -1.45
CLDND1-228ENST00000513873 FGF10O15520 208 aaPredicted RBP6.02□□□□□ -1.45
CLDND1-228ENST00000513873 ITGAVP06756 1048 aa6.02□□□□□ -1.45
CLDND1-228ENST00000513873 PAMP19021 973 aa6.02□□□□□ -1.45
CLDND1-228ENST00000513873 PDE6BP35913 854 aa6.02□□□□□ -1.45
CLDND1-228ENST00000513873 IFRD2Q12894 506 aaPredicted RBP6.02□□□□□ -1.45
CLDND1-228ENST00000513873 LAPTM5Q13571 262 aa6.02□□□□□ -1.45
CLDND1-228ENST00000513873 AMIGO3Q86WK7 504 aa6.02□□□□□ -1.45
CLDND1-228ENST00000513873 LRRC47Q8N1G4 583 aaKnown RBP6.02□□□□□ -1.45
CLDND1-228ENST00000513873 ST13P5Q8NFI4 369 aaPredicted RBP6.02□□□□□ -1.45
CLDND1-228ENST00000513873 RELTQ969Z4 430 aa6.02□□□□□ -1.45
CLDND1-228ENST00000513873 RNF32Q9H0A6 362 aa6.02□□□□□ -1.45
CLDND1-228ENST00000513873 CYP26B1Q9NR63 512 aa6.02□□□□□ -1.45
CLDND1-228ENST00000513873 TET3O43151 1660 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 BLMP54132 1417 aaPredicted RBP6.01□□□□□ -1.45
CLDND1-228ENST00000513873 NPHP3-ACAD11A0A0J9YXS1 232 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 PDPK1O15530 556 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 PSPNO60542 156 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 SNRPB2P08579 225 aaKnown RBP6.01□□□□□ -1.45
CLDND1-228ENST00000513873 HOXC12P31275 282 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 L1CAMP32004 1257 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 SCRN1Q12765 414 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 HSP90AA2PQ14568 343 aaPredicted RBP6.01□□□□□ -1.45
CLDND1-228ENST00000513873 SLC10A6Q3KNW5 377 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 MTERF2Q49AM1 385 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 MRM1Q6IN84 353 aaKnown RBP6.01□□□□□ -1.45
CLDND1-228ENST00000513873 IQCEQ6IPM2 695 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 SIRT2Q8IXJ6 389 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 NUP43Q8NFH3 380 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 SGSM3Q96HU1 749 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 IPO9Q96P70 1041 aaKnown RBP6.01□□□□□ -1.45
CLDND1-228ENST00000513873 CCDC113Q9H0I3 377 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 CRTAC1Q9NQ79 661 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 SLC52A1Q9NWF4 448 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 EBF1Q9UH73 591 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 TRPC5Q9UL62 973 aaPredicted RBP6.01□□□□□ -1.45
CLDND1-228ENST00000513873 UNC13BO14795 1591 aa6.01□□□□□ -1.45
CLDND1-228ENST00000513873 RPGRIP1LQ68CZ1 1315 aa6□□□□□ -1.45
CLDND1-228ENST00000513873 ANP32CO43423 234 aa6□□□□□ -1.45
CLDND1-228ENST00000513873 CPP00450 1065 aa6□□□□□ -1.45
CLDND1-228ENST00000513873 PNLIPP16233 465 aa6□□□□□ -1.45
CLDND1-228ENST00000513873 PRKCAP17252 672 aa6□□□□□ -1.45
CLDND1-228ENST00000513873 ECI1P42126 302 aa6□□□□□ -1.45
CLDND1-228ENST00000513873 CYP4F8P98187 520 aa6□□□□□ -1.45
CLDND1-228ENST00000513873 RGL3Q3MIN7 710 aa6□□□□□ -1.45
CLDND1-228ENST00000513873 HSF5Q4G112 596 aaPredicted RBP6□□□□□ -1.45
CLDND1-228ENST00000513873 ZNF227Q86WZ6 799 aa6□□□□□ -1.45
CLDND1-228ENST00000513873 ZNF513Q8N8E2 541 aaPredicted RBP6□□□□□ -1.45
CLDND1-228ENST00000513873 BTN2A2Q8WVV5 523 aa6□□□□□ -1.45
CLDND1-228ENST00000513873 UBXN4Q92575 508 aa6□□□□□ -1.45
CLDND1-228ENST00000513873 LRRC59Q96AG4 307 aaKnown RBP6□□□□□ -1.45
CLDND1-228ENST00000513873 LIN37Q96GY3 246 aaPredicted RBP6□□□□□ -1.45
CLDND1-228ENST00000513873 MRGPRX3Q96LB0 322 aa6□□□□□ -1.45
CLDND1-228ENST00000513873 SRPK1Q96SB4 655 aaKnown RBP6□□□□□ -1.45
CLDND1-228ENST00000513873 DNAJC2Q99543 621 aaKnown RBP6□□□□□ -1.45
CLDND1-228ENST00000513873 CARD11Q9BXL7 1154 aa6□□□□□ -1.45
CLDND1-228ENST00000513873 NKX2-4Q9H2Z4 354 aa6□□□□□ -1.45
CLDND1-228ENST00000513873 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6□□□□□ -1.45
CLDND1-228ENST00000513873 YBX2Q9Y2T7 364 aaKnown RBP6□□□□□ -1.45
CLDND1-228ENST00000513873 ERVK-7P63135 1459 aa6□□□□□ -1.45
CLDND1-228ENST00000513873 EIF2AK4Q9P2K8 1649 aaKnown RBP5.99□□□□□ -1.45
CLDND1-228ENST00000513873 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.99□□□□□ -1.45
CLDND1-228ENST00000513873 BCL9LQ86UU0 1499 aa5.99□□□□□ -1.45
CLDND1-228ENST00000513873 NPHS1O60500 1241 aa5.99□□□□□ -1.45
CLDND1-228ENST00000513873 CENPBP07199 599 aaPredicted RBP5.99□□□□□ -1.45
CLDND1-228ENST00000513873 TMEM62Q0P6H9 643 aa5.99□□□□□ -1.45
CLDND1-228ENST00000513873 TIGD5Q53EQ6 642 aa5.99□□□□□ -1.45
CLDND1-228ENST00000513873 OLFML2BQ68BL8 750 aa5.99□□□□□ -1.45
CLDND1-228ENST00000513873 TMEM132EQ6IEE7 984 aa5.99□□□□□ -1.45
CLDND1-228ENST00000513873 SLCO6A1Q86UG4 719 aa5.99□□□□□ -1.45
CLDND1-228ENST00000513873 NLRX1Q86UT6 975 aa5.99□□□□□ -1.45
CLDND1-228ENST00000513873 USP33Q8TEY7 942 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms