RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 LINC01387J3KSC0 135 aa8.36□□□□□ -1.07
RFC1-215ENST00000512881 ALX3O95076 343 aa8.36□□□□□ -1.07
RFC1-215ENST00000512881 EPHA1P21709 976 aa8.36□□□□□ -1.07
RFC1-215ENST00000512881 CYP7A1P22680 504 aa8.36□□□□□ -1.07
RFC1-215ENST00000512881 CAP2P40123 477 aa8.36□□□□□ -1.07
RFC1-215ENST00000512881 SPP2Q13103 211 aa8.36□□□□□ -1.07
RFC1-215ENST00000512881 SLC4A8Q2Y0W8 1093 aa8.36□□□□□ -1.07
RFC1-215ENST00000512881 AACSQ86V21 672 aa8.36□□□□□ -1.07
RFC1-215ENST00000512881 FOXP4Q8IVH2 680 aaPredicted RBP8.36□□□□□ -1.07
RFC1-215ENST00000512881 MAPKAPK5Q8IW41 473 aa8.36□□□□□ -1.07
RFC1-215ENST00000512881 TMEM130Q8N3G9 435 aa8.36□□□□□ -1.07
RFC1-215ENST00000512881 HERC5Q9UII4 1024 aaKnown RBP8.36□□□□□ -1.07
RFC1-215ENST00000512881 PDE4DIPQ5VU43 2346 aa8.36□□□□□ -1.07
RFC1-215ENST00000512881 IDH1O75874 414 aaKnown RBP8.35□□□□□ -1.07
RFC1-215ENST00000512881 WISP1O95388 367 aa8.35□□□□□ -1.07
RFC1-215ENST00000512881 CDC27P30260 824 aa8.35□□□□□ -1.07
RFC1-215ENST00000512881 FCGRTP55899 365 aa8.35□□□□□ -1.07
RFC1-215ENST00000512881 DYNLL1P63167 89 aaKnown RBP8.35□□□□□ -1.07
RFC1-215ENST00000512881 HSP90AB4PQ58FF6 505 aa8.35□□□□□ -1.07
RFC1-215ENST00000512881 TREML2Q5T2D2 321 aa8.35□□□□□ -1.07
RFC1-215ENST00000512881 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.35□□□□□ -1.07
RFC1-215ENST00000512881 METTL16Q86W50 562 aaKnown RBP8.35□□□□□ -1.07
RFC1-215ENST00000512881 RPAP2Q8IXW5 612 aaPredicted RBP8.35□□□□□ -1.07
RFC1-215ENST00000512881 RAET1EQ8TD07 263 aa8.35□□□□□ -1.07
RFC1-215ENST00000512881 ANTXR1Q9H6X2 564 aa8.35□□□□□ -1.07
RFC1-215ENST00000512881 IL1RAPL2Q9NP60 686 aa8.35□□□□□ -1.07
RFC1-215ENST00000512881 ZBTB40Q9NUA8 1239 aa8.35□□□□□ -1.07
RFC1-215ENST00000512881 SAP30BPQ9UHR5 308 aaKnown RBP8.35□□□□□ -1.07
RFC1-215ENST00000512881 PALD1Q9ULE6 856 aa8.35□□□□□ -1.07
RFC1-215ENST00000512881 POLIQ9UNA4 740 aa8.35□□□□□ -1.07
RFC1-215ENST00000512881 AGTPBP1Q9UPW5 1226 aa8.35□□□□□ -1.07
RFC1-215ENST00000512881 OTOFQ9HC10 1997 aa8.35□□□□□ -1.07
RFC1-215ENST00000512881 FLT1P17948 1338 aa8.34□□□□□ -1.07
RFC1-215ENST00000512881 PCSK2P16519 638 aa8.34□□□□□ -1.07
RFC1-215ENST00000512881 GRK4P32298 578 aa8.34□□□□□ -1.07
RFC1-215ENST00000512881 HMGCS2P54868 508 aa8.34□□□□□ -1.07
RFC1-215ENST00000512881 JAG1P78504 1218 aa8.34□□□□□ -1.07
RFC1-215ENST00000512881 PRKCZQ05513 592 aa8.34□□□□□ -1.07
RFC1-215ENST00000512881 MAP3K12Q12852 859 aa8.34□□□□□ -1.07
RFC1-215ENST00000512881 C8orf34Q49A92 452 aa8.34□□□□□ -1.07
RFC1-215ENST00000512881 ALKBH2Q6NS38 261 aa8.34□□□□□ -1.07
RFC1-215ENST00000512881 SIRT2Q8IXJ6 389 aa8.34□□□□□ -1.07
RFC1-215ENST00000512881 AGGF1Q8N302 714 aaeCLIP8.34□□□□□ -1.07
RFC1-215ENST00000512881 CRACR2BQ8N4Y2 399 aaPredicted RBP8.34□□□□□ -1.07
RFC1-215ENST00000512881 MAGEB6Q8N7X4 407 aa8.34□□□□□ -1.07
RFC1-215ENST00000512881 MIGA1Q8NAN2 632 aa8.34□□□□□ -1.07
RFC1-215ENST00000512881 SMCR8Q8TEV9 937 aaPredicted RBP8.34□□□□□ -1.07
RFC1-215ENST00000512881 POP1Q99575 1024 aaKnown RBP8.34□□□□□ -1.07
RFC1-215ENST00000512881 WDR18Q9BV38 432 aa8.34□□□□□ -1.07
RFC1-215ENST00000512881 RCAN3Q9UKA8 241 aa8.34□□□□□ -1.07
RFC1-215ENST00000512881 DDX19BQ9UMR2 479 aa8.34□□□□□ -1.07
RFC1-215ENST00000512881 MYPNQ86TC9 1320 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 COL2A1P02458 1487 aaPredicted RBP8.33□□□□□ -1.08
RFC1-215ENST00000512881 FZD6O60353 706 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 HMMRO75330 724 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 HLA-DOAP06340 250 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 ASNSP08243 561 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 USP5P45974 858 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 PABPC4Q13310 644 aaKnown RBP eCLIP8.33□□□□□ -1.08
RFC1-215ENST00000512881 TMED8Q6PL24 325 aaPredicted RBP8.33□□□□□ -1.08
RFC1-215ENST00000512881 PRR23CQ6ZRP0 262 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 CERS3Q8IU89 383 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 CLASRPQ8N2M8 674 aaKnown RBP8.33□□□□□ -1.08
RFC1-215ENST00000512881 ANKRD13CQ8N6S4 541 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 KIF1BPQ96EK5 621 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 HHIPQ96QV1 700 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 ADAM19Q9H013 955 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 CHMP4BQ9H444 224 aaKnown RBP8.33□□□□□ -1.08
RFC1-215ENST00000512881 DNAJC18Q9H819 358 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 AS3MTQ9HBK9 375 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 SH2B1Q9NRF2 756 aaPredicted RBP8.33□□□□□ -1.08
RFC1-215ENST00000512881 GINM1Q9NU53 330 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 KCNK4Q9NYG8 393 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 BIN2Q9UBW5 565 aaPredicted RBP8.33□□□□□ -1.08
RFC1-215ENST00000512881 GABRQQ9UN88 632 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 USTQ9Y2C2 406 aa8.33□□□□□ -1.08
RFC1-215ENST00000512881 KIAA0100Q14667 2235 aaKnown RBP8.32□□□□□ -1.08
RFC1-215ENST00000512881 TNPO2O14787 897 aaKnown RBP8.32□□□□□ -1.08
RFC1-215ENST00000512881 RAB11FIP3O75154 756 aa8.32□□□□□ -1.08
RFC1-215ENST00000512881 IFIT2P09913 472 aaKnown RBP8.32□□□□□ -1.08
RFC1-215ENST00000512881 CCL5P13501 91 aa8.32□□□□□ -1.08
RFC1-215ENST00000512881 CES1P23141 567 aa8.32□□□□□ -1.08
RFC1-215ENST00000512881 GCLCP48506 637 aaPredicted RBP8.32□□□□□ -1.08
RFC1-215ENST00000512881 FLT3LGP49771 235 aa8.32□□□□□ -1.08
RFC1-215ENST00000512881 BACE1P56817 501 aa8.32□□□□□ -1.08
RFC1-215ENST00000512881 ZNF211Q13398 564 aaPredicted RBP8.32□□□□□ -1.08
RFC1-215ENST00000512881 TTF1Q15361 905 aaPredicted RBP8.32□□□□□ -1.08
RFC1-215ENST00000512881 SHROOM1Q2M3G4 852 aaPredicted RBP8.32□□□□□ -1.08
RFC1-215ENST00000512881 BCL11AQ9H165 835 aa8.32□□□□□ -1.08
RFC1-215ENST00000512881 ASCC2Q9H1I8 757 aaPredicted RBP8.32□□□□□ -1.08
RFC1-215ENST00000512881 DZANK1Q9NVP4 752 aa8.32□□□□□ -1.08
RFC1-215ENST00000512881 TMOD4Q9NZQ9 345 aa8.32□□□□□ -1.08
RFC1-215ENST00000512881 LAMB1P07942 1786 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 SCO2A0A1W2PP80 73 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 C19orf81C9J6K1 198 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 GOLIM4O00461 696 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 FSCN2O14926 492 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 ADCY3O60266 1144 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 ADAM11O75078 769 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 FAM13AO94988 1023 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms