RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 CYTH3O43739 400 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 SLC37A4O43826 429 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 ERLIN2O94905 339 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 DLATP10515 647 aaKnown RBP13.16□□□□□ -0.3
PRDM16-207ENST00000512462 PDHBP11177 359 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 NPR1P16066 1061 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 RPL13P26373 211 aaKnown RBP13.16□□□□□ -0.3
PRDM16-207ENST00000512462 RNF187Q5TA31 235 aaPredicted RBP13.16□□□□□ -0.3
PRDM16-207ENST00000512462 SUGCTQ9HAC7 445 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 EMILIN3Q9NT22 766 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 RABGAP1Q9Y3P9 1069 aa13.16□□□□□ -0.3
PRDM16-207ENST00000512462 LOC102724159A0A0B4J2E5 919 aa13.15□□□□□ -0.3
PRDM16-207ENST00000512462 GOLGA8IPA6NC78 632 aa13.15□□□□□ -0.3
PRDM16-207ENST00000512462 GOLGA8JA6NMD2 632 aa13.15□□□□□ -0.3
PRDM16-207ENST00000512462 EFCAB8A8MWE9 144 aa13.15□□□□□ -0.3
PRDM16-207ENST00000512462 NEFHP12036 1026 aa13.15□□□□□ -0.3
PRDM16-207ENST00000512462 PWP2Q15269 919 aaKnown RBP13.15□□□□□ -0.3
PRDM16-207ENST00000512462 CC2D2BQ6DHV5 1058 aa13.15□□□□□ -0.3
PRDM16-207ENST00000512462 MRRFQ96E11 262 aaKnown RBP13.15□□□□□ -0.3
PRDM16-207ENST00000512462 PAGR1Q9BTK6 254 aa13.15□□□□□ -0.3
PRDM16-207ENST00000512462 TRIM9Q9C026 710 aa13.15□□□□□ -0.3
PRDM16-207ENST00000512462 NT5C3AQ9H0P0 336 aa13.15□□□□□ -0.3
PRDM16-207ENST00000512462 FAM102BQ5T8I3 360 aa13.15□□□□□ -0.3
PRDM16-207ENST00000512462 ARL6IP4Q66PJ3 421 aaKnown RBP13.15□□□□□ -0.3
PRDM16-207ENST00000512462 KCTD16Q68DU8 428 aa13.15□□□□□ -0.3
PRDM16-207ENST00000512462 ZFPM1Q8IX07 1006 aa13.15□□□□□ -0.3
PRDM16-207ENST00000512462 NOX5Q96PH1 765 aa13.15□□□□□ -0.3
PRDM16-207ENST00000512462 ZBTB5O15062 677 aa13.15□□□□□ -0.3
PRDM16-207ENST00000512462 PMS1P54277 932 aaKnown RBP13.15□□□□□ -0.3
PRDM16-207ENST00000512462 LONRF2Q1L5Z9 754 aa13.15□□□□□ -0.3
PRDM16-207ENST00000512462 MIER3Q7Z3K6 550 aa13.15□□□□□ -0.3
PRDM16-207ENST00000512462 ZNF668Q96K58 619 aaPredicted RBP13.15□□□□□ -0.3
PRDM16-207ENST00000512462 TJP1Q07157 1748 aa13.15□□□□□ -0.31
PRDM16-207ENST00000512462 POTEB2H3BUK9 544 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 K7ENM7 598 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 ZNF185O15231 689 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 GYPCP04921 128 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 VPS41P49754 854 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 HDXQ7Z353 690 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 NAA15Q9BXJ9 866 aaKnown RBP13.14□□□□□ -0.31
PRDM16-207ENST00000512462 ADD3Q9UEY8 706 aaKnown RBP13.14□□□□□ -0.31
PRDM16-207ENST00000512462 MYMKA6NI61 221 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 GCOM1H8Y6P7 765 aaPredicted RBP13.14□□□□□ -0.31
PRDM16-207ENST00000512462 PLEKP08567 350 aaPredicted RBP13.14□□□□□ -0.31
PRDM16-207ENST00000512462 POLR2MP0CAP2 368 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 GFPT1Q06210 699 aaPredicted RBP13.14□□□□□ -0.31
PRDM16-207ENST00000512462 GALNT17Q6IS24 598 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 SRGAP1Q7Z6B7 1085 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 SFR1Q86XK3 245 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 C10orf67Q8IYJ2 551 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 BANK1Q8NDB2 785 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 MASTLQ96GX5 879 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 GOLPH3Q9H4A6 298 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 FBXO28Q9NVF7 368 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 HSF2BPO75031 334 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 TNFAIP3P21580 790 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 ATP1A2P50993 1020 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 ARHGAP4P98171 946 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 FKBP3Q00688 224 aaKnown RBP13.14□□□□□ -0.31
PRDM16-207ENST00000512462 SYDE2Q5VT97 1194 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 GPR161Q8N6U8 529 aaKnown RBP13.14□□□□□ -0.31
PRDM16-207ENST00000512462 CNKSR1Q969H4 720 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 NUP58Q9BVL2 599 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 ZNF341Q9BYN7 854 aa13.14□□□□□ -0.31
PRDM16-207ENST00000512462 DDX4Q9NQI0 724 aaKnown RBP13.14□□□□□ -0.31
PRDM16-207ENST00000512462 ESYT3A0FGR9 886 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 LRRC53A6NM62 1247 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 STAT2P52630 851 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
PRDM16-207ENST00000512462 XKR9Q5GH70 373 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 BARGINQ6ZT62 677 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 PPM1KQ8N3J5 372 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 UBLCP1Q8WVY7 318 aaPredicted RBP13.13□□□□□ -0.31
PRDM16-207ENST00000512462 BPIFA3Q9BQP9 254 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 ZNF577Q9BSK1 485 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 DPH5Q9H2P9 285 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 HAUS4Q9H6D7 363 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 CTTNBP2NLQ9P2B4 639 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 DUSP10Q9Y6W6 482 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 PPP1R3GB7ZBB8 358 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 GFPT2O94808 682 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 EEF1GP26641 437 aaKnown RBP13.13□□□□□ -0.31
PRDM16-207ENST00000512462 VAV2P52735 878 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 APBA1Q02410 837 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 RCSD1Q6JBY9 416 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 CCDC50Q8IVM0 306 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 TAB3Q8N5C8 712 aaPredicted RBP13.13□□□□□ -0.31
PRDM16-207ENST00000512462 DYDC1Q8WWB3 177 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 DHTKD1Q96HY7 919 aaPredicted RBP13.13□□□□□ -0.31
PRDM16-207ENST00000512462 CCDC17Q96LX7 622 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 TUBB4AP04350 444 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 PNMA6AP0CW24 399 aaPredicted RBP13.13□□□□□ -0.31
PRDM16-207ENST00000512462 KIF11P52732 1056 aa13.13□□□□□ -0.31
PRDM16-207ENST00000512462 DDX41Q9UJV9 622 aaKnown RBP13.13□□□□□ -0.31
PRDM16-207ENST00000512462 ECE1P42892 770 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 EXOC3L4Q17RC7 722 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 ZNF384Q8TF68 577 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 PPP1R16BQ96T49 567 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 NUDT12Q9BQG2 462 aa13.12□□□□□ -0.31
PRDM16-207ENST00000512462 RTFDC1Q9BY42 306 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms