RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 DMRTB1Q96MA1 342 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 NLRP3Q96P20 1036 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 DCBLD2Q96PD2 775 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 GBP4Q96PP9 640 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 NCAPGQ9BPX3 1015 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 SPON2Q9BUD6 331 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 FHDC1Q9C0D6 1143 aaPredicted RBP5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 CCDC113Q9H0I3 377 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 HELLSQ9NRZ9 838 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 TBC1D22BQ9NU19 505 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 DNAAF2Q9NVR5 837 aaKnown RBP5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 PDP2Q9P2J9 529 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 ARHGAP28Q9P2N2 729 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 DDX20Q9UHI6 824 aaKnown RBP5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 PARP3Q9Y6F1 533 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 ZBED9Q6R2W3 1325 aa5.64□□□□□ -1.51
TRAPPC11-208ENST00000511955 A0A087WZG4 1122 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 E2F8A0AVK6 867 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 AKR1B15C9JRZ8 316 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 SASH1O94885 1247 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 PARP1P09874 1014 aaKnown RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 CAPN2P17655 700 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 CHKAP35790 457 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 CD86P42081 329 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 MCM2P49736 904 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 PAPOLAP51003 745 aaKnown RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 DDR1Q08345 913 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 ACAP1Q15027 740 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 PREPLQ4J6C6 727 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 TNNI3KQ59H18 835 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 ITPRIPL1Q6GPH6 555 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 DSTYKQ6XUX3 929 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 DZIP1Q86YF9 867 aaKnown RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 FAM186BQ8IYM0 893 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 CCDC191Q8NCU4 936 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 SPATA18Q8TC71 538 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 CPLX3Q8WVH0 158 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 NACC2Q96BF6 587 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 C1orf74Q96LT6 269 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 RMDN2Q96LZ7 410 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 ALG1Q9BT22 464 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 CFHR5Q9BXR6 569 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 ATP6V0A4Q9HBG4 840 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 PAPOLBQ9NRJ5 636 aaKnown RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 MAPK8IP1Q9UQF2 711 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 KDM2BQ8NHM5 1336 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 PI4KAP2A4QPH2 592 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 H0YHG0 523 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 XPOTO43592 962 aaKnown RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 MTRF1O75570 445 aaKnown RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 SLC3A2P08195 630 aaKnown RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 XPAP23025 273 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 HMGB2P26583 209 aaKnown RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 MXI1P50539 228 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 SCNN1DP51172 638 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 KIF11P52732 1056 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 POLR2FP61218 127 aaKnown RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 SARNPP82979 210 aaKnown RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 MPP1Q00013 466 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 PRPF4BQ13523 1007 aaKnown RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 GALEQ14376 348 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 CBX2Q14781 532 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 CCNG2Q16589 344 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 WDR44Q5JSH3 913 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 TTC39AQ5SRH9 613 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 ALG1LQ6GMV1 187 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 BTNL9Q6UXG8 535 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 SAPCD2Q86UD0 394 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 PI4KAP1Q8N8J0 262 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 DRAXINQ8NBI3 349 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 SLC16A10Q8TF71 515 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 THAP3Q8WTV1 239 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 SSH1Q8WYL5 1049 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 BAP1Q92560 729 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 KIFC2Q96AC6 838 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 RADILQ96JH8 1075 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 HINFPQ9BQA5 517 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 CRB3Q9BUF7 120 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 TSPYL1Q9H0U9 437 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 STARD7Q9NQZ5 370 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 VPS45Q9NRW7 570 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 KLHL11Q9NVR0 708 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 HYPKQ9NX55 129 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 PRKAG3Q9UGI9 489 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 EIF2B4Q9UI10 523 aaKnown RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 ZNF112Q9UJU3 913 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 HCN4Q9Y3Q4 1203 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 EPN1Q9Y6I3 576 aaPredicted RBP5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 C4AP0C0L4 1744 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 MAP3K15Q6ZN16 1313 aa5.63□□□□□ -1.51
TRAPPC11-208ENST00000511955 SMAD7O15105 426 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 MYO1BO43795 1136 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 BCAR3O75815 825 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 ABLIM3O94929 683 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 CPP00450 1065 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 DNTTP04053 509 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 SERPINB2P05120 415 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 HOXB7P09629 217 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 ATP6V1B1P15313 513 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 CD46P15529 392 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms