RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 SPATA25Q9BR10 227 aa4.79□□□□□ -1.64
CHD1-207ENST00000511628 GPR27Q9NS67 375 aa4.79□□□□□ -1.64
CHD1-207ENST00000511628 NUB1Q9Y5A7 615 aa4.79□□□□□ -1.64
CHD1-207ENST00000511628 FAM221BA6H8Z2 402 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 B8ZZF3 427 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 DLX3O60479 287 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 C8BP07358 591 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 FGFR1P11362 822 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 CAP1Q01518 475 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 CYP4F3Q08477 520 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 SSRP1Q08945 709 aaKnown RBP4.78□□□□□ -1.64
CHD1-207ENST00000511628 SPIRE1Q08AE8 756 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 RASA3Q14644 834 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 NT5DC1Q5TFE4 455 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 EP400NLQ6ZTU2 488 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 STK32CQ86UX6 486 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 NLRP10Q86W26 655 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 FAM126BQ8IXS8 530 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 FAM26EQ8N5C1 309 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 TTLL6Q8N841 843 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 TOE1Q96GM8 510 aaKnown RBP4.78□□□□□ -1.64
CHD1-207ENST00000511628 NOX5Q96PH1 765 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 KCNJ15Q99712 375 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 ALG1Q9BT22 464 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 SPATA9Q9BWV2 254 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 SIRPGQ9P1W8 387 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 PFDN2Q9UHV9 154 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 FBXL7Q9UJT9 491 aa4.78□□□□□ -1.64
CHD1-207ENST00000511628 CDK11AQ9UQ88 783 aaPredicted RBP4.78□□□□□ -1.64
CHD1-207ENST00000511628 GNAT1P11488 350 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 SYN1P17600 705 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 KIZQ2M2Z5 673 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 UBXN11Q5T124 520 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 SOGA3Q5TF21 947 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 NBPF6Q5VWK0 638 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 PRAMEF18Q5VWM3 479 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 DENND5AQ6IQ26 1287 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 RSPO2Q6UXX9 243 aaPredicted RBP4.77□□□□□ -1.65
CHD1-207ENST00000511628 FAM124AQ86V42 546 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 JAZF1Q86VZ6 243 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 TRIM48Q8IWZ4 208 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 IFNL3Q8IZI9 196 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 FAM177A1Q8N128 213 aaPredicted RBP4.77□□□□□ -1.65
CHD1-207ENST00000511628 CARFQ8N187 725 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 C1orf159Q96HA4 380 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 NBPF4Q96M43 638 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 CLIC6Q96NY7 704 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 GORASP1Q9BQQ3 440 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 C11orf84Q9BUA3 381 aaPredicted RBP4.77□□□□□ -1.65
CHD1-207ENST00000511628 JAM3Q9BX67 310 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 ARHGEF4Q9NR80 690 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 SNTG2Q9NY99 539 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 MYOTQ9UBF9 498 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 ZNF652Q9Y2D9 606 aa4.77□□□□□ -1.65
CHD1-207ENST00000511628 BLACEA4D250 179 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 SH3D21A4FU49 640 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 ARNTLO00327 626 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 CYP7B1O75881 506 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 HTRA3P83110 453 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 TESK1Q15569 626 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 VWA3BQ502W6 1294 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 KCNT2Q6UVM3 1135 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 MTDHQ86UE4 582 aaKnown RBP4.76□□□□□ -1.65
CHD1-207ENST00000511628 MIB1Q86YT6 1006 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 Q8N1Y9 231 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 KYQ8NBH2 561 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 TP53I13Q8NBR0 393 aaPredicted RBP4.76□□□□□ -1.65
CHD1-207ENST00000511628 PHOSPHO1Q8TCT1 267 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.76□□□□□ -1.65
CHD1-207ENST00000511628 DDX1Q92499 740 aaKnown RBP4.76□□□□□ -1.65
CHD1-207ENST00000511628 TEPSINQ96N21 525 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 ZFYVE21Q9BQ24 234 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 XYLT2Q9H1B5 865 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 ADAM7Q9H2U9 754 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 SMOC1Q9H4F8 434 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 MSRB2Q9Y3D2 182 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 TBX22Q9Y458 520 aa4.76□□□□□ -1.65
CHD1-207ENST00000511628 A0A0G2JLL6 359 aaPredicted RBP4.75□□□□□ -1.65
CHD1-207ENST00000511628 FAM47E-STBD1D6RA91 191 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 FOXD2O60548 495 aaPredicted RBP4.75□□□□□ -1.65
CHD1-207ENST00000511628 CYP1A1P04798 512 aaPredicted RBP4.75□□□□□ -1.65
CHD1-207ENST00000511628 GRK2P25098 689 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 GRK3P35626 688 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 GPR85P60893 370 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 RASGRF1Q13972 1273 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 LBX2Q6XYB7 198 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 SPATC1Q76KD6 591 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 FRMD5Q7Z6J6 570 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 NOP9Q86U38 636 aaKnown RBP4.75□□□□□ -1.65
CHD1-207ENST00000511628 SCUBE1Q8IWY4 988 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 ARRDC4Q8NCT1 418 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 PIP4K2CQ8TBX8 421 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 OSBP2Q969R2 916 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 MKL1Q969V6 931 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 ZNF669Q96BR6 464 aaPredicted RBP4.75□□□□□ -1.65
CHD1-207ENST00000511628 SRPK1Q96SB4 655 aaKnown RBP4.75□□□□□ -1.65
CHD1-207ENST00000511628 CCDC113Q9H0I3 377 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 L2HGDHQ9H9P8 463 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 RTEL1Q9NZ71 1219 aa4.75□□□□□ -1.65
CHD1-207ENST00000511628 DTLQ9NZJ0 730 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms