RNA–Protein interactions for RNA: ENST00000510676.6

PTCD2-208, Transcript of pentatricopeptide repeat domain 2, human

TSL 5

Gene PTCD2, Length 1,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD2-208	ENST00000510676	ADGRA3	Q8IWK6	1321 aa		12.85	□□□□□ -0.35
PTCD2-208	ENST00000510676	RSPH10B2	B2RC85	870 aa		12.84	□□□□□ -0.35
PTCD2-208	ENST00000510676	PRKAB2	O43741	272 aa		12.84	□□□□□ -0.35
PTCD2-208	ENST00000510676	MMP3	P08254	477 aa		12.84	□□□□□ -0.35
PTCD2-208	ENST00000510676	RSPH10B	P0C881	870 aa		12.84	□□□□□ -0.35
PTCD2-208	ENST00000510676	AOC1	P19801	751 aa		12.84	□□□□□ -0.35
PTCD2-208	ENST00000510676	SDHB	P21912	280 aa		12.84	□□□□□ -0.35
PTCD2-208	ENST00000510676	NRIP1	P48552	1158 aa		12.84	□□□□□ -0.35
PTCD2-208	ENST00000510676	STAT2	P52630	851 aa		12.84	□□□□□ -0.35
PTCD2-208	ENST00000510676	CHMP4BP1	P59074	171 aa		12.84	□□□□□ -0.35
PTCD2-208	ENST00000510676	NAALADL2	Q58DX5	795 aa		12.84	□□□□□ -0.35
PTCD2-208	ENST00000510676	KIAA0319	Q5VV43	1072 aa		12.84	□□□□□ -0.35
PTCD2-208	ENST00000510676	BPTF	Q12830	3046 aa		12.84	□□□□□ -0.35
PTCD2-208	ENST00000510676	ZNF532	Q9HCE3	1301 aa		12.84	□□□□□ -0.35
PTCD2-208	ENST00000510676	HAS3	O00219	553 aa		12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	PLA2G6	O60733	806 aa		12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	TXN	P10599	105 aa	Known RBP	12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	BMP3	P12645	472 aa		12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	RASA1	P20936	1047 aa		12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	CCDC62	Q6P9F0	684 aa		12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	SERINC5	Q86VE9	423 aa		12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	AMOTL1	Q8IY63	956 aa		12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	C7orf31	Q8N865	590 aa		12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	DTWD2	Q8NBA8	298 aa		12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	CYP2W1	Q8TAV3	490 aa		12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	SPPL3	Q8TCT6	385 aa		12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	AFG1L	Q8WV93	481 aa		12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	API5	Q9BZZ5	524 aa	Known RBP	12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	S1PR5	Q9H228	398 aa		12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	ARMT1	Q9H993	441 aa		12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	CLIP2	Q9UDT6	1046 aa		12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	MYO10	Q9HD67	2058 aa		12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	BAZ2A	Q9UIF9	1905 aa	Known RBP	12.83	□□□□□ -0.36
PTCD2-208	ENST00000510676	NBEA	Q8NFP9	2946 aa		12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	DSP	P15924	2871 aa	Known RBP	12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	FSD2	A1L4K1	749 aa		12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	TMEM232	C9JQI7	657 aa		12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	ARIH2	O95376	493 aa		12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	F2	P00734	622 aa		12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	ADRB1	P08588	477 aa		12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	BAAT	Q14032	418 aa	Predicted RBP	12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	TTF1	Q15361	905 aa	Predicted RBP	12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	NSMF	Q6X4W1	530 aa		12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	TMEM184A	Q6ZMB5	413 aa		12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	FAM160B2	Q86V87	743 aa		12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	VN1R2	Q8NFZ6	395 aa		12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	CHURC1	Q8WUH1	139 aa		12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	EAF2	Q96CJ1	260 aa	Predicted RBP	12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	ZNF689	Q96CS4	500 aa	Predicted RBP	12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	SMC4	Q9NTJ3	1288 aa		12.82	□□□□□ -0.36
PTCD2-208	ENST00000510676	SMG1	Q96Q15	3661 aa	Known RBP	12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676		E9PSI1	815 aa		12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	GNAI2	P04899	355 aa		12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	ITGB1	P05556	798 aa		12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	HOXB3	P14651	431 aa	Predicted RBP	12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	CAST	P20810	708 aa	Known RBP	12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	ATXN1	P54253	815 aa	Known RBP	12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	PDE4B	Q07343	736 aa		12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	ARHGAP1	Q07960	439 aa		12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	HIC1	Q14526	733 aa		12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	CTR9	Q6PD62	1173 aa		12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	STAG1	Q8WVM7	1258 aa		12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	APBB2	Q92870	758 aa		12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	GMCL1	Q96IK5	515 aa		12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	KATNAL1	Q9BW62	490 aa		12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	CCDC8	Q9H0W5	538 aa	Predicted RBP	12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	MFSD1	Q9H3U5	465 aa		12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	SMOC2	Q9H3U7	446 aa		12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	MTMR4	Q9NYA4	1195 aa		12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	NOB1	Q9ULX3	412 aa	Known RBP	12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	NR2E1	Q9Y466	385 aa		12.81	□□□□□ -0.36
PTCD2-208	ENST00000510676	PI15	O43692	258 aa		12.8	□□□□□ -0.36
PTCD2-208	ENST00000510676	CAND2	O75155	1236 aa		12.8	□□□□□ -0.36
PTCD2-208	ENST00000510676	NPR3	P17342	541 aa		12.8	□□□□□ -0.36
PTCD2-208	ENST00000510676	THPO	P40225	353 aa		12.8	□□□□□ -0.36
PTCD2-208	ENST00000510676	PSEN2	P49810	448 aa		12.8	□□□□□ -0.36
PTCD2-208	ENST00000510676	ZNF200	P98182	395 aa	Predicted RBP	12.8	□□□□□ -0.36
PTCD2-208	ENST00000510676	PDE4D	Q08499	809 aa		12.8	□□□□□ -0.36
PTCD2-208	ENST00000510676	KCNC3	Q14003	757 aa		12.8	□□□□□ -0.36
PTCD2-208	ENST00000510676	DGKD	Q16760	1214 aa		12.8	□□□□□ -0.36
PTCD2-208	ENST00000510676	SLFN13	Q68D06	897 aa		12.8	□□□□□ -0.36
PTCD2-208	ENST00000510676	EMID1	Q96A84	441 aa	Predicted RBP	12.8	□□□□□ -0.36
PTCD2-208	ENST00000510676	RTP3	Q9BQQ7	232 aa		12.8	□□□□□ -0.36
PTCD2-208	ENST00000510676	OSBPL7	Q9BZF2	842 aa		12.8	□□□□□ -0.36
PTCD2-208	ENST00000510676	UNC79	Q9P2D8	2635 aa		12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	CSPG5	O95196	566 aa		12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	MBD4	O95243	580 aa		12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	TTLL1	O95922	423 aa		12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	ICAM1	P05362	532 aa		12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	AR	P10275	920 aa		12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	HOXD8	P13378	290 aa	Predicted RBP	12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	HOXC8	P31273	242 aa		12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	RBM10	P98175	930 aa	Known RBP	12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	MFSD10	Q14728	455 aa		12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	KIAA0753	Q2KHM9	967 aa		12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	RBM23	Q86U06	439 aa	Known RBP	12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	DCLK2	Q8N568	766 aa		12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	SSH3	Q8TE77	659 aa		12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	CEP95	Q96GE4	821 aa		12.79	□□□□□ -0.36
PTCD2-208	ENST00000510676	NEK1	Q96PY6	1258 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms