RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 FBXL5Q9UKA1 691 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 NENFQ9UMX5 172 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 SUGT1Q9Y2Z0 365 aa10.22□□□□□ -0.77
PDGFRA-208ENST00000509490 LRRC53A6NM62 1247 aa10.21□□□□□ -0.77
PDGFRA-208ENST00000509490 NOL4O94818 638 aa10.21□□□□□ -0.77
PDGFRA-208ENST00000509490 PDHBP11177 359 aa10.21□□□□□ -0.77
PDGFRA-208ENST00000509490 TECP42680 631 aa10.21□□□□□ -0.77
PDGFRA-208ENST00000509490 CCDC96Q2M329 555 aa10.21□□□□□ -0.77
PDGFRA-208ENST00000509490 EDRF1Q3B7T1 1238 aa10.21□□□□□ -0.77
PDGFRA-208ENST00000509490 NBPF5PQ86XG9 351 aaPredicted RBP10.21□□□□□ -0.77
PDGFRA-208ENST00000509490 C2CD5Q86YS7 1000 aa10.21□□□□□ -0.77
PDGFRA-208ENST00000509490 CAGE1Q8TC20 777 aa10.21□□□□□ -0.77
PDGFRA-208ENST00000509490 GGA2Q9UJY4 613 aa10.21□□□□□ -0.77
PDGFRA-208ENST00000509490 TFR2Q9UP52 801 aa10.21□□□□□ -0.77
PDGFRA-208ENST00000509490 COL4A3BPQ9Y5P4 624 aa10.21□□□□□ -0.77
PDGFRA-208ENST00000509490 GRIN2DO15399 1336 aa10.21□□□□□ -0.77
PDGFRA-208ENST00000509490 PITPNM2Q9BZ72 1349 aa10.21□□□□□ -0.77
PDGFRA-208ENST00000509490 CYP3A7-CYP3A51PA0A087WV96 503 aa10.21□□□□□ -0.78
PDGFRA-208ENST00000509490 CYP3A7P24462 503 aa10.21□□□□□ -0.78
PDGFRA-208ENST00000509490 MAGEA1P43355 309 aa10.21□□□□□ -0.78
PDGFRA-208ENST00000509490 CYP27A1Q02318 531 aa10.21□□□□□ -0.78
PDGFRA-208ENST00000509490 C2orf54Q08AI8 447 aa10.21□□□□□ -0.78
PDGFRA-208ENST00000509490 DNAJC21Q5F1R6 531 aaKnown RBP10.21□□□□□ -0.78
PDGFRA-208ENST00000509490 DPY19L2P1Q6NXN4 242 aa10.21□□□□□ -0.78
PDGFRA-208ENST00000509490 SPATS2Q86XZ4 545 aaKnown RBP10.21□□□□□ -0.78
PDGFRA-208ENST00000509490 IQCKQ8N0W5 287 aa10.21□□□□□ -0.78
PDGFRA-208ENST00000509490 LRRC1Q9BTT6 524 aa10.21□□□□□ -0.78
PDGFRA-208ENST00000509490 PLCB1Q9NQ66 1216 aa10.21□□□□□ -0.78
PDGFRA-208ENST00000509490 JADE2Q9NQC1 790 aa10.21□□□□□ -0.78
PDGFRA-208ENST00000509490 ATF5Q9Y2D1 282 aaPredicted RBP10.21□□□□□ -0.78
PDGFRA-208ENST00000509490 KAT6BQ8WYB5 2073 aa10.21□□□□□ -0.78
PDGFRA-208ENST00000509490 NKRFO15226 690 aaKnown RBP eCLIP10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 PLEKP08567 350 aaPredicted RBP10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 IRAK1P51617 712 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 ADCY7P51828 1080 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 CRY2Q49AN0 593 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 CFAP221Q4G0U5 840 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 MCTP2Q6DN12 878 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 KRT26Q7Z3Y9 468 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 TBC1D22AQ8WUA7 517 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 PPM1EQ8WY54 764 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 INPP4AQ96PE3 977 aaPredicted RBP10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 NT5C3AQ9H0P0 336 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 DMGDHQ9UI17 866 aaKnown RBP10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 ATP6V0A2Q9Y487 856 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 MACROD2A1Z1Q3 448 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 GOLGA6CA6NDK9 693 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 EIF3HO15372 352 aaKnown RBP eCLIP10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 GOLGA6DP0CG33 693 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 ATP2B4P23634 1241 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 PAFAH1B1P43034 410 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 TNNT3P45378 269 aaPredicted RBP10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 SLC18A3Q16572 532 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 SLC9C1Q4G0N8 1177 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 MEI1Q5TIA1 1274 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 KRT79Q5XKE5 535 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 IFT20Q8IY31 132 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 MYOCDQ8IZQ8 938 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 TGFBRAP1Q8WUH2 860 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 CAPZA3Q96KX2 299 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 PIGSQ96S52 555 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 MLXIPQ9HAP2 919 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 GOLGA6AQ9NYA3 693 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 STK24Q9Y6E0 443 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 A0A087WUV0 522 aaPredicted RBP10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 PNMA6FA0A0J9YX94 578 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 TLR2O60603 784 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 MOCS3O95396 460 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 ZBTB48P10074 688 aaPredicted RBP10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 NOP2P46087 812 aaKnown RBP10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 CEP95Q96GE4 821 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 GANQ9H2C0 597 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 KCTD10Q9H3F6 313 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 SLC39A2Q9NP94 309 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 MTMR4Q9NYA4 1195 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 SALL4Q9UJQ4 1053 aa10.2□□□□□ -0.78
PDGFRA-208ENST00000509490 SLC37A4O43826 429 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 AKR1B10O60218 316 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 BTDP43251 543 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 FOXR1Q6PIV2 292 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 LRIG3Q6UXM1 1119 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 SLC44A5Q8NCS7 719 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 WHAMMQ8TF30 809 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 DDX12PQ92771 950 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 CALR3Q96L12 384 aaKnown RBP10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 STX8Q9UNK0 236 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 DAAM1Q9Y4D1 1078 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 PES1O00541 588 aaKnown RBP10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 GFPT2O94808 682 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 PRKCIP41743 596 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 COASYQ13057 564 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 GRIK5Q16478 980 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 KDM7AQ6ZMT4 941 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 RRAGAQ7L523 313 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 HAS1Q92839 578 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 PCMTD1Q96MG8 357 aaPredicted RBP10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 PLIN2Q99541 437 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 MXD3Q9BW11 206 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 INTUQ9ULD6 942 aa10.19□□□□□ -0.78
PDGFRA-208ENST00000509490 BZW2Q9Y6E2 419 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms