RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 SMYD4Q8IYR2 804 aaPredicted RBP2.82□□□□□ -1.96
PDE4D-218ENST00000509368 CMTR2Q8IYT2 770 aaKnown RBP2.82□□□□□ -1.96
PDE4D-218ENST00000509368 EFHBQ8N7U6 833 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 BAHD1Q8TBE0 780 aaPredicted RBP2.82□□□□□ -1.96
PDE4D-218ENST00000509368 EVI5LQ96CN4 794 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 CLIP3Q96DZ5 547 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 TRIM8Q9BZR9 551 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 KCNF1Q9H3M0 494 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 CRTAC1Q9NQ79 661 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 CHST12Q9NRB3 414 aa2.82□□□□□ -1.96
PDE4D-218ENST00000509368 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.81□□□□□ -1.96
PDE4D-218ENST00000509368 WASH4PA8MWX3 477 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 TBX3O15119 743 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 SHOXO15266 292 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 RNGTTO60942 597 aaKnown RBP2.81□□□□□ -1.96
PDE4D-218ENST00000509368 GSNP06396 782 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 SNRPB2P08579 225 aaKnown RBP2.81□□□□□ -1.96
PDE4D-218ENST00000509368 CD53P19397 219 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 MAP4P27816 1152 aaKnown RBP2.81□□□□□ -1.96
PDE4D-218ENST00000509368 ADCYAP1R1P41586 468 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 POU4F1Q01851 419 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 BTKQ06187 659 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 ZNF765Q7L2R6 523 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 NME8Q8N427 588 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 CHST14Q8NCH0 376 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 C1orf162Q8NEQ5 155 aaPredicted RBP2.81□□□□□ -1.96
PDE4D-218ENST00000509368 PPP1R14AQ96A00 147 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 FAXDC2Q96IV6 333 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 FGD4Q96M96 766 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 NMRK2Q9NPI5 230 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 ATG3Q9NT62 314 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 PCMTD2Q9NV79 361 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 KLHL11Q9NVR0 708 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 ADGRE2Q9UHX3 823 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 MINPP1Q9UNW1 487 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 PTPN22Q9Y2R2 807 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 CUL7Q14999 1698 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 VSTM5A8MXK1 200 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 C9orf172C9J069 976 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 TCEA3O75764 348 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 SLITRK5O94991 958 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 CRTAMO95727 393 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 DDIT3P35638 169 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 GRIA2P42262 883 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 KPNA1P52294 538 aaPredicted RBP2.81□□□□□ -1.96
PDE4D-218ENST00000509368 ZNF445P59923 1031 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 ZNF460Q14592 562 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 PTPN21Q16825 1174 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 NOL9Q5SY16 702 aaKnown RBP2.81□□□□□ -1.96
PDE4D-218ENST00000509368 DCAF15Q66K64 600 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 BEND4Q6ZU67 534 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 C22orf34Q6ZV56 151 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 C16orf59Q7L2K0 433 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 FAM20CQ8IXL6 584 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 IFNL2Q8IZJ0 200 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 FAM181AQ8N9Y4 354 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 TMEM145Q8NBT3 493 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 KREMEN2Q8NCW0 462 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 BTN2A2Q8WVV5 523 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 ATXN2LQ8WWM7 1075 aaKnown RBP2.81□□□□□ -1.96
PDE4D-218ENST00000509368 COPS5Q92905 334 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 HSPBAP1Q96EW2 488 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 AHCYL2Q96HN2 611 aaKnown RBP2.81□□□□□ -1.96
PDE4D-218ENST00000509368 ZC3H10Q96K80 434 aaKnown RBP2.81□□□□□ -1.96
PDE4D-218ENST00000509368 MFSD14AQ96MC6 490 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 ALG1Q9BT22 464 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 CCDC8Q9H0W5 538 aaPredicted RBP2.81□□□□□ -1.96
PDE4D-218ENST00000509368 C7orf69Q9H7B7 122 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 EMC7Q9NPA0 242 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 RAPGEFL1Q9UHV5 662 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 SYNJ2O15056 1496 aa2.81□□□□□ -1.96
PDE4D-218ENST00000509368 AQRO60306 1485 aaKnown RBP eCLIP2.81□□□□□ -1.96
PDE4D-218ENST00000509368 TOP2BQ02880 1626 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 MAFGO15525 162 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 KCNH1O95259 989 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 RXRBP28702 533 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 LSP1P33241 339 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 KIR3DL1P43629 444 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 LACTBP83111 547 aaPredicted RBP2.8□□□□□ -1.96
PDE4D-218ENST00000509368 GUCY1A3Q02108 690 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 PAK1Q13153 545 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 KIZQ2M2Z5 673 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 ALFQ53S48 1182 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 TDRD10Q5VZ19 366 aaKnown RBP2.8□□□□□ -1.96
PDE4D-218ENST00000509368 ANKRD34AQ69YU3 496 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 TTLL5Q6EMB2 1281 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 RCSD1Q6JBY9 416 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 ARMCX6Q7L4S7 300 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 MORC1Q86VD1 984 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 RASSF3Q86WH2 238 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 TEX19Q8NA77 164 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 NPLOC4Q8TAT6 608 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 SNRNP27Q8WVK2 155 aaKnown RBP2.8□□□□□ -1.96
PDE4D-218ENST00000509368 FAM193BQ96PV7 902 aaPredicted RBP2.8□□□□□ -1.96
PDE4D-218ENST00000509368 SMAD5Q99717 465 aaKnown RBP2.8□□□□□ -1.96
PDE4D-218ENST00000509368 NLRC4Q9NPP4 1024 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 IP6K2Q9UHH9 426 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 TAGLN3Q9UI15 199 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 KCNH3Q9ULD8 1083 aa2.8□□□□□ -1.96
PDE4D-218ENST00000509368 TRAF5O00463 557 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms