RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 DYNC1LI2O43237 492 aaPredicted RBP10.41□□□□□ -0.74
NUP54-207ENST00000508583 JAK2O60674 1132 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 ADAMTS4O75173 837 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 PGK1P00558 417 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 MMP1P03956 469 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 CYP3A4P08684 503 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 USP11P51784 963 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 MRPS9P82933 396 aaKnown RBP10.41□□□□□ -0.74
NUP54-207ENST00000508583 ARHGAP4P98171 946 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 GNL2Q13823 731 aaKnown RBP10.41□□□□□ -0.74
NUP54-207ENST00000508583 NONOQ15233 471 aaKnown RBP eCLIP10.41□□□□□ -0.74
NUP54-207ENST00000508583 CEP55Q53EZ4 464 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 GNASQ5JWF2 1037 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 ANO1Q5XXA6 986 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 CCDC62Q6P9F0 684 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 DHX37Q8IY37 1157 aaKnown RBP10.41□□□□□ -0.74
NUP54-207ENST00000508583 IL31RAQ8NI17 732 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 SNX21Q969T3 373 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 GLT1D1Q96MS3 346 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 JADE2Q9NQC1 790 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 POLR3EQ9NVU0 708 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 DDX41Q9UJV9 622 aaKnown RBP10.41□□□□□ -0.74
NUP54-207ENST00000508583 PHF24Q9UPV7 400 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 SMC3Q9UQE7 1217 aa10.41□□□□□ -0.74
NUP54-207ENST00000508583 ELP1O95163 1332 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 SPATA31C2B4DYI2 1134 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 K7ELQ4 463 aaPredicted RBP10.4□□□□□ -0.74
NUP54-207ENST00000508583 NOP56O00567 594 aaKnown RBP10.4□□□□□ -0.74
NUP54-207ENST00000508583 FDPSP14324 419 aaKnown RBP10.4□□□□□ -0.74
NUP54-207ENST00000508583 GCFC2P16383 781 aaKnown RBP10.4□□□□□ -0.74
NUP54-207ENST00000508583 PDCP20941 246 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 MLLT1Q03111 559 aaPredicted RBP10.4□□□□□ -0.74
NUP54-207ENST00000508583 ST3GAL1Q11201 340 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 DGKDQ16760 1214 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 CELF3Q5SZQ8 465 aaKnown RBP10.4□□□□□ -0.74
NUP54-207ENST00000508583 GJC2Q5T442 439 aaPredicted RBP10.4□□□□□ -0.74
NUP54-207ENST00000508583 MOXD1Q6UVY6 613 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 METTL7BQ6UX53 244 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 KLHDC9Q8NEP7 349 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 PPTC7Q8NI37 304 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 LENG1Q96BZ8 264 aaPredicted RBP10.4□□□□□ -0.74
NUP54-207ENST00000508583 INTS4Q96HW7 963 aaKnown RBP10.4□□□□□ -0.74
NUP54-207ENST00000508583 PAWRQ96IZ0 340 aaKnown RBP10.4□□□□□ -0.74
NUP54-207ENST00000508583 AIFM3Q96NN9 605 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 MXRA8Q9BRK3 442 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 SDF4Q9BRK5 362 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 KATNAL1Q9BW62 490 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 MLXIPQ9HAP2 919 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 TMEM260Q9NX78 707 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 RTEL1Q9NZ71 1219 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 UBIAD1Q9Y5Z9 338 aa10.4□□□□□ -0.74
NUP54-207ENST00000508583 MROH7Q68CQ1 1323 aa10.39□□□□□ -0.75
NUP54-207ENST00000508583 A6NJR5 290 aa10.39□□□□□ -0.75
NUP54-207ENST00000508583 H3BQV1 296 aa10.39□□□□□ -0.75
NUP54-207ENST00000508583 HSP90AA1P07900 732 aaKnown RBP10.39□□□□□ -0.75
NUP54-207ENST00000508583 PDIA4P13667 645 aaKnown RBP10.39□□□□□ -0.75
NUP54-207ENST00000508583 UBA1P22314 1058 aaKnown RBP10.39□□□□□ -0.75
NUP54-207ENST00000508583 CIITAP33076 1130 aa10.39□□□□□ -0.75
NUP54-207ENST00000508583 KCNA10Q16322 511 aa10.39□□□□□ -0.75
NUP54-207ENST00000508583 LY6KQ17RY6 165 aa10.39□□□□□ -0.75
NUP54-207ENST00000508583 KRT40Q6A162 431 aa10.39□□□□□ -0.75
NUP54-207ENST00000508583 UBE2Q1Q7Z7E8 422 aa10.39□□□□□ -0.75
NUP54-207ENST00000508583 FBXO18Q8NFZ0 1043 aa10.39□□□□□ -0.75
NUP54-207ENST00000508583 TBCKQ8TEA7 893 aa10.39□□□□□ -0.75
NUP54-207ENST00000508583 VTI1AQ96AJ9 217 aa10.39□□□□□ -0.75
NUP54-207ENST00000508583 PGBD1Q96JS3 809 aa10.39□□□□□ -0.75
NUP54-207ENST00000508583 SPATA33Q96N06 139 aa10.39□□□□□ -0.75
NUP54-207ENST00000508583 SENP6Q9GZR1 1112 aaPredicted RBP10.39□□□□□ -0.75
NUP54-207ENST00000508583 FOXP1Q9H334 677 aaPredicted RBP10.39□□□□□ -0.75
NUP54-207ENST00000508583 STARD7Q9NQZ5 370 aa10.39□□□□□ -0.75
NUP54-207ENST00000508583 KCNJ14Q9UNX9 436 aa10.39□□□□□ -0.75
NUP54-207ENST00000508583 NFASCO94856 1347 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 A0A1W2PQ45 241 aaPredicted RBP10.38□□□□□ -0.75
NUP54-207ENST00000508583 A0A1W2PQY0 241 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 M0R2N6 131 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 MEIS1O00470 390 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 ADCY6O43306 1168 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 RGS20O76081 388 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 ARIH2O95376 493 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 CD2BP2O95400 341 aaKnown RBP10.38□□□□□ -0.75
NUP54-207ENST00000508583 GGPS1O95749 300 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 ASGR1P07306 291 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 COL6A1P12109 1028 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 ITGB5P18084 799 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 ACLYP53396 1101 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 ARHGAP1Q07960 439 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 CUL4AQ13619 759 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 C1orf53Q5VUE5 145 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 MYSM1Q5VVJ2 828 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 PIK3AP1Q6ZUJ8 805 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 NEK8Q86SG6 692 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 PLA2G4DQ86XP0 818 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 DIS3L2Q8IYB7 885 aaKnown RBP10.38□□□□□ -0.75
NUP54-207ENST00000508583 RASGRP4Q8TDF6 673 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 DIS3LQ8TF46 1054 aaKnown RBP10.38□□□□□ -0.75
NUP54-207ENST00000508583 CRYGNQ8WXF5 182 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 MTG1Q9BT17 334 aaPredicted RBP10.38□□□□□ -0.75
NUP54-207ENST00000508583 JPH1Q9HDC5 661 aaPredicted RBP10.38□□□□□ -0.75
NUP54-207ENST00000508583 KCNH7Q9NS40 1196 aa10.38□□□□□ -0.75
NUP54-207ENST00000508583 TBC1D22BQ9NU19 505 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms