RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 FDX1P10109 184 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 ARP10275 920 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 ALDH5A1P51649 535 aaPredicted RBP8.62□□□□□ -1.03
VCAN-207ENST00000507162 RBM10P98175 930 aaKnown RBP8.62□□□□□ -1.03
VCAN-207ENST00000507162 PDE4DQ08499 809 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 RBL2Q08999 1139 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 CAMK1Q14012 370 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 BAATQ14032 418 aaPredicted RBP8.62□□□□□ -1.03
VCAN-207ENST00000507162 TRIM71Q2Q1W2 868 aaKnown RBP8.62□□□□□ -1.03
VCAN-207ENST00000507162 PLEKHG4Q58EX7 1191 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 SESTD1Q86VW0 696 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 DHX37Q8IY37 1157 aaKnown RBP8.62□□□□□ -1.03
VCAN-207ENST00000507162 MORC4Q8TE76 937 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 RUBCNQ92622 972 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 KAT2BQ92831 832 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 GPR108Q9NPR9 543 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 SMC4Q9NTJ3 1288 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 TLR7Q9NYK1 1049 aaKnown RBP8.62□□□□□ -1.03
VCAN-207ENST00000507162 ADD3Q9UEY8 706 aaKnown RBP8.62□□□□□ -1.03
VCAN-207ENST00000507162 DBNLQ9UJU6 430 aaKnown RBP8.62□□□□□ -1.03
VCAN-207ENST00000507162 SORCS3Q9UPU3 1222 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 RWDD3Q9Y3V2 267 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 TANC1Q9C0D5 1861 aa8.62□□□□□ -1.03
VCAN-207ENST00000507162 PNMA6EA0A0J9YXQ4 647 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.61□□□□□ -1.03
VCAN-207ENST00000507162 PTPDC1A2A3K4 754 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 STK25O00506 426 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 PPFIA3O75145 1194 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 GLP2RO95838 553 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 MMP1P03956 469 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 BMP3P12645 472 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 PDE6AP16499 860 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 CASTP20810 708 aaKnown RBP8.61□□□□□ -1.03
VCAN-207ENST00000507162 DNAJB1P25685 340 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 MTX1Q13505 466 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 BTG3Q14201 252 aaPredicted RBP8.61□□□□□ -1.03
VCAN-207ENST00000507162 SLFN13Q68D06 897 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 TMED8Q6PL24 325 aaPredicted RBP8.61□□□□□ -1.03
VCAN-207ENST00000507162 DTWD2Q8NBA8 298 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 SCFD2Q8WU76 684 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 CHURC1Q8WUH1 139 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 SUSD6Q92537 303 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 DDRGK1Q96HY6 314 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 MKNK2Q9HBH9 465 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 ATP8A2Q9NTI2 1148 aa8.61□□□□□ -1.03
VCAN-207ENST00000507162 NOB1Q9ULX3 412 aaKnown RBP8.61□□□□□ -1.03
VCAN-207ENST00000507162 SURF6O75683 361 aaKnown RBP8.6□□□□□ -1.03
VCAN-207ENST00000507162 ASGR2P07307 311 aa8.6□□□□□ -1.03
VCAN-207ENST00000507162 MMP3P08254 477 aa8.6□□□□□ -1.03
VCAN-207ENST00000507162 CALML3P27482 149 aa8.6□□□□□ -1.03
VCAN-207ENST00000507162 PSEN2P49810 448 aa8.6□□□□□ -1.03
VCAN-207ENST00000507162 STAT2P52630 851 aa8.6□□□□□ -1.03
VCAN-207ENST00000507162 CCDC105Q8IYK2 499 aa8.6□□□□□ -1.03
VCAN-207ENST00000507162 SPPL3Q8TCT6 385 aa8.6□□□□□ -1.03
VCAN-207ENST00000507162 RIN2Q8WYP3 895 aaPredicted RBP8.6□□□□□ -1.03
VCAN-207ENST00000507162 NEK1Q96PY6 1258 aa8.6□□□□□ -1.03
VCAN-207ENST00000507162 OSBPL7Q9BZF2 842 aa8.6□□□□□ -1.03
VCAN-207ENST00000507162 CCPG1Q9ULG6 757 aa8.6□□□□□ -1.03
VCAN-207ENST00000507162 NR2E1Q9Y466 385 aa8.6□□□□□ -1.03
VCAN-207ENST00000507162 MBD4O95243 580 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 ARIH2O95376 493 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 ITGB1P05556 798 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 LINC00271P0C7V0 271 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 RASA1P20936 1047 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 SDHBP21912 280 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 TECP42680 631 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 MFSD10Q14728 455 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 DGKDQ16760 1214 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 LY6KQ17RY6 165 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 KIAA0753Q2KHM9 967 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 SLFNL1Q499Z3 407 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 CTR9Q6PD62 1173 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 FAM160B2Q86V87 743 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 KLHL23Q8NBE8 558 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 STAG1Q8WVM7 1258 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 POF1BQ8WVV4 589 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 CLP1Q92989 425 aaKnown RBP8.59□□□□□ -1.03
VCAN-207ENST00000507162 PLVAPQ9BX97 442 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 API5Q9BZZ5 524 aaKnown RBP8.59□□□□□ -1.03
VCAN-207ENST00000507162 LIMD1Q9UGP4 676 aa8.59□□□□□ -1.03
VCAN-207ENST00000507162 C2CD4DB7Z1M9 353 aa8.58□□□□□ -1.04
VCAN-207ENST00000507162 GH1P01241 217 aa8.58□□□□□ -1.04
VCAN-207ENST00000507162 GNAI2P04899 355 aa8.58□□□□□ -1.04
VCAN-207ENST00000507162 CTSHP09668 335 aa8.58□□□□□ -1.04
VCAN-207ENST00000507162 AOC1P19801 751 aa8.58□□□□□ -1.04
VCAN-207ENST00000507162 MCCP23508 829 aa8.58□□□□□ -1.04
VCAN-207ENST00000507162 DMWDQ09019 674 aa8.58□□□□□ -1.04
VCAN-207ENST00000507162 TTF1Q15361 905 aaPredicted RBP8.58□□□□□ -1.04
VCAN-207ENST00000507162 SEPT14Q6ZU15 432 aa8.58□□□□□ -1.04
VCAN-207ENST00000507162 RPAP2Q8IXW5 612 aaPredicted RBP8.58□□□□□ -1.04
VCAN-207ENST00000507162 ZNF444Q8N0Y2 327 aaPredicted RBP8.58□□□□□ -1.04
VCAN-207ENST00000507162 EAF2Q96CJ1 260 aaPredicted RBP8.58□□□□□ -1.04
VCAN-207ENST00000507162 MPHOSPH6Q99547 160 aaKnown RBP8.58□□□□□ -1.04
VCAN-207ENST00000507162 RTP3Q9BQQ7 232 aa8.58□□□□□ -1.04
VCAN-207ENST00000507162 S1PR5Q9H228 398 aa8.58□□□□□ -1.04
VCAN-207ENST00000507162 CDV3Q9UKY7 258 aaKnown RBP8.58□□□□□ -1.04
VCAN-207ENST00000507162 SLC4A4Q9Y6R1 1079 aa8.58□□□□□ -1.04
VCAN-207ENST00000507162 ADGRA3Q8IWK6 1321 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 MINDY4BA8MYZ0 360 aa8.57□□□□□ -1.04
VCAN-207ENST00000507162 BCAR3O75815 825 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms