RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 HAS3O00219 553 aa11.56□□□□□ -0.56
NEDD9-210ENST00000505589 ARIH2O95376 493 aa11.56□□□□□ -0.56
NEDD9-210ENST00000505589 F2P00734 622 aa11.56□□□□□ -0.56
NEDD9-210ENST00000505589 IL9P15248 144 aa11.56□□□□□ -0.56
NEDD9-210ENST00000505589 KCNA4P22459 653 aa11.56□□□□□ -0.56
NEDD9-210ENST00000505589 EPC2Q52LR7 807 aa11.56□□□□□ -0.56
NEDD9-210ENST00000505589 ZNF618Q5T7W0 954 aa11.56□□□□□ -0.56
NEDD9-210ENST00000505589 TSHZ3Q63HK5 1081 aa11.56□□□□□ -0.56
NEDD9-210ENST00000505589 FAM117BQ6P1L5 589 aa11.56□□□□□ -0.56
NEDD9-210ENST00000505589 DBF4BQ8NFT6 615 aa11.56□□□□□ -0.56
NEDD9-210ENST00000505589 SP7Q8TDD2 431 aaPredicted RBP11.56□□□□□ -0.56
NEDD9-210ENST00000505589 SYTL5Q8TDW5 730 aaPredicted RBP11.56□□□□□ -0.56
NEDD9-210ENST00000505589 KHSRPQ92945 711 aaKnown RBP eCLIP11.56□□□□□ -0.56
NEDD9-210ENST00000505589 TAAR1Q96RJ0 339 aa11.56□□□□□ -0.56
NEDD9-210ENST00000505589 IRF2BPLQ9H1B7 796 aa11.56□□□□□ -0.56
NEDD9-210ENST00000505589 KAT14Q9H8E8 782 aa11.56□□□□□ -0.56
NEDD9-210ENST00000505589 CD320Q9NPF0 282 aa11.56□□□□□ -0.56
NEDD9-210ENST00000505589 INCENPQ9NQS7 918 aa11.56□□□□□ -0.56
NEDD9-210ENST00000505589 C17orf102A2RUQ5 167 aa11.55□□□□□ -0.56
NEDD9-210ENST00000505589 ZNF213O14771 459 aa11.55□□□□□ -0.56
NEDD9-210ENST00000505589 NR3C2P08235 984 aa11.55□□□□□ -0.56
NEDD9-210ENST00000505589 THPOP40225 353 aa11.55□□□□□ -0.56
NEDD9-210ENST00000505589 ASPRV1Q53RT3 343 aa11.55□□□□□ -0.56
NEDD9-210ENST00000505589 PLEKHG4Q58EX7 1191 aa11.55□□□□□ -0.56
NEDD9-210ENST00000505589 EP400NLQ6ZTU2 488 aa11.55□□□□□ -0.56
NEDD9-210ENST00000505589 FBXO11Q86XK2 927 aa11.55□□□□□ -0.56
NEDD9-210ENST00000505589 ADHFE1Q8IWW8 467 aa11.55□□□□□ -0.56
NEDD9-210ENST00000505589 TMEM192Q8IY95 271 aa11.55□□□□□ -0.56
NEDD9-210ENST00000505589 SPATA33Q96N06 139 aa11.55□□□□□ -0.56
NEDD9-210ENST00000505589 USP26Q9BXU7 913 aa11.55□□□□□ -0.56
NEDD9-210ENST00000505589 MLXIPQ9HAP2 919 aa11.55□□□□□ -0.56
NEDD9-210ENST00000505589 REV3LO60673 3130 aa11.55□□□□□ -0.56
NEDD9-210ENST00000505589 DHX16O60231 1041 aaKnown RBP11.54□□□□□ -0.56
NEDD9-210ENST00000505589 CDC37Q16543 378 aaPredicted RBP11.54□□□□□ -0.56
NEDD9-210ENST00000505589 CELF3Q5SZQ8 465 aaKnown RBP11.54□□□□□ -0.56
NEDD9-210ENST00000505589 MYSM1Q5VVJ2 828 aa11.54□□□□□ -0.56
NEDD9-210ENST00000505589 FAM43BQ6ZT52 329 aaPredicted RBP11.54□□□□□ -0.56
NEDD9-210ENST00000505589 SERINC5Q86VE9 423 aa11.54□□□□□ -0.56
NEDD9-210ENST00000505589 FIBCD1Q8N539 461 aa11.54□□□□□ -0.56
NEDD9-210ENST00000505589 DHX38Q92620 1227 aaKnown RBP11.54□□□□□ -0.56
NEDD9-210ENST00000505589 ATP6V0A1Q93050 837 aa11.54□□□□□ -0.56
NEDD9-210ENST00000505589 IL17RAQ96F46 866 aa11.54□□□□□ -0.56
NEDD9-210ENST00000505589 CTAGE1Q96RT6 745 aa11.54□□□□□ -0.56
NEDD9-210ENST00000505589 C17orf80Q9BSJ5 609 aa11.54□□□□□ -0.56
NEDD9-210ENST00000505589 AMNQ9BXJ7 453 aa11.54□□□□□ -0.56
NEDD9-210ENST00000505589 TET1Q8NFU7 2136 aa11.54□□□□□ -0.56
NEDD9-210ENST00000505589 C19orf67A6NJJ6 358 aa11.53□□□□□ -0.56
NEDD9-210ENST00000505589 H3BRB1 525 aa11.53□□□□□ -0.56
NEDD9-210ENST00000505589 STAM2O75886 525 aa11.53□□□□□ -0.56
NEDD9-210ENST00000505589 CFBP00751 764 aa11.53□□□□□ -0.56
NEDD9-210ENST00000505589 RPLP2P05387 115 aaKnown RBP11.53□□□□□ -0.56
NEDD9-210ENST00000505589 PARP1P09874 1014 aaKnown RBP11.53□□□□□ -0.56
NEDD9-210ENST00000505589 HOXD8P13378 290 aaPredicted RBP11.53□□□□□ -0.56
NEDD9-210ENST00000505589 NHLH1Q02575 133 aa11.53□□□□□ -0.56
NEDD9-210ENST00000505589 TRIM71Q2Q1W2 868 aaKnown RBP11.53□□□□□ -0.56
NEDD9-210ENST00000505589 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.53□□□□□ -0.56
NEDD9-210ENST00000505589 TMCO2Q7Z6W1 182 aaPredicted RBP11.53□□□□□ -0.56
NEDD9-210ENST00000505589 ADGRF4Q8IZF3 695 aa11.53□□□□□ -0.56
NEDD9-210ENST00000505589 PNMA1Q8ND90 353 aa11.53□□□□□ -0.56
NEDD9-210ENST00000505589 PPP1R13LQ8WUF5 828 aa11.53□□□□□ -0.56
NEDD9-210ENST00000505589 ANKS1AQ92625 1134 aa11.53□□□□□ -0.56
NEDD9-210ENST00000505589 C11orf84Q9BUA3 381 aaPredicted RBP11.53□□□□□ -0.56
NEDD9-210ENST00000505589 UBA5Q9GZZ9 404 aa11.53□□□□□ -0.56
NEDD9-210ENST00000505589 TUT1Q9H6E5 874 aaKnown RBP11.53□□□□□ -0.56
NEDD9-210ENST00000505589 PXMP2Q9NR77 195 aa11.53□□□□□ -0.56
NEDD9-210ENST00000505589 CLDND1Q9NY35 253 aa11.53□□□□□ -0.56
NEDD9-210ENST00000505589 TANC1Q9C0D5 1861 aa11.53□□□□□ -0.56
NEDD9-210ENST00000505589 C5orf67F2Z3F1 127 aa11.52□□□□□ -0.57
NEDD9-210ENST00000505589 H3BQ06 376 aaPredicted RBP11.52□□□□□ -0.57
NEDD9-210ENST00000505589 NOP56O00567 594 aaKnown RBP11.52□□□□□ -0.57
NEDD9-210ENST00000505589 UPP2O95045 317 aa11.52□□□□□ -0.57
NEDD9-210ENST00000505589 EIF2AK2P19525 551 aaKnown RBP11.52□□□□□ -0.57
NEDD9-210ENST00000505589 ZP2Q05996 745 aa11.52□□□□□ -0.57
NEDD9-210ENST00000505589 NEDD9Q14511 834 aa11.52□□□□□ -0.57
NEDD9-210ENST00000505589 COL19A1Q14993 1142 aa11.52□□□□□ -0.57
NEDD9-210ENST00000505589 SMAD2Q15796 467 aaKnown RBP11.52□□□□□ -0.57
NEDD9-210ENST00000505589 GNPTABQ3T906 1256 aa11.52□□□□□ -0.57
NEDD9-210ENST00000505589 NAALADL2Q58DX5 795 aa11.52□□□□□ -0.57
NEDD9-210ENST00000505589 TCEAL5Q5H9L2 206 aa11.52□□□□□ -0.57
NEDD9-210ENST00000505589 VPS53Q5VIR6 699 aa11.52□□□□□ -0.57
NEDD9-210ENST00000505589 STOX1Q6ZVD7 989 aa11.52□□□□□ -0.57
NEDD9-210ENST00000505589 BMP8AQ7Z5Y6 402 aa11.52□□□□□ -0.57
NEDD9-210ENST00000505589 RSPH3Q86UC2 560 aa11.52□□□□□ -0.57
NEDD9-210ENST00000505589 VSIG10LQ86VR7 867 aa11.52□□□□□ -0.57
NEDD9-210ENST00000505589 TNPO1Q92973 898 aaKnown RBP11.52□□□□□ -0.57
NEDD9-210ENST00000505589 FBXL18Q96ME1 805 aa11.52□□□□□ -0.57
NEDD9-210ENST00000505589 PLVAPQ9BX97 442 aa11.52□□□□□ -0.57
NEDD9-210ENST00000505589 IFIH1Q9BYX4 1025 aaKnown RBP11.52□□□□□ -0.57
NEDD9-210ENST00000505589 ZNF215Q9UL58 517 aaPredicted RBP11.52□□□□□ -0.57
NEDD9-210ENST00000505589 FSD2A1L4K1 749 aa11.51□□□□□ -0.57
NEDD9-210ENST00000505589 GGPS1O95749 300 aa11.51□□□□□ -0.57
NEDD9-210ENST00000505589 GOLGA8HP0CJ92 632 aa11.51□□□□□ -0.57
NEDD9-210ENST00000505589 MYCLP12524 364 aaPredicted RBP11.51□□□□□ -0.57
NEDD9-210ENST00000505589 CCND2P30279 289 aa11.51□□□□□ -0.57
NEDD9-210ENST00000505589 BMPR1AP36894 532 aa11.51□□□□□ -0.57
NEDD9-210ENST00000505589 PTPN5P54829 565 aa11.51□□□□□ -0.57
NEDD9-210ENST00000505589 GHRHRQ02643 423 aa11.51□□□□□ -0.57
NEDD9-210ENST00000505589 HERC4Q5GLZ8 1057 aaPredicted RBP11.51□□□□□ -0.57
NEDD9-210ENST00000505589 TRAF7Q6Q0C0 670 aa11.51□□□□□ -0.57
NEDD9-210ENST00000505589 RASGRP2Q7LDG7 609 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms