RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 CIITAP33076 1130 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 SHMT1P34896 483 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 TNNI2P48788 182 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 MMP14P50281 582 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 USP14P54578 494 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 DDR1Q08345 913 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 MCM6Q14566 821 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 SLC4A8Q2Y0W8 1093 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 SLC9C1Q4G0N8 1177 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 Q4G0T1 1027 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 GLE1Q53GS7 698 aaKnown RBP4.31□□□□□ -1.72
ALYREF-201ENST00000504015 HSP90B2PQ58FF3 399 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 FAM26FQ5R3K3 315 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 MEX3CQ5U5Q3 659 aaKnown RBP4.31□□□□□ -1.72
ALYREF-201ENST00000504015 STRIP1Q5VSL9 837 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 APOBEC3HQ6NTF7 200 aaKnown RBP4.31□□□□□ -1.72
ALYREF-201ENST00000504015 CDC42EP5Q6NZY7 148 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 TATDN1Q6P1N9 297 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 BTNL9Q6UXG8 535 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 LRRC55Q6ZSA7 311 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 TMEM179Q6ZVK1 233 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 SMIM5Q71RC9 77 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 CACNA2D4Q7Z3S7 1137 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 ERMNQ8TAM6 284 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.31□□□□□ -1.72
ALYREF-201ENST00000504015 DDX12PQ92771 950 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 SECISBP2LQ93073 1101 aaKnown RBP4.31□□□□□ -1.72
ALYREF-201ENST00000504015 COA7Q96BR5 231 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 DNAJC19Q96DA6 116 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 MASTLQ96GX5 879 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 ALS2CR12Q96Q35 445 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 AMNQ9BXJ7 453 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 METTL14Q9HCE5 456 aaKnown RBP4.31□□□□□ -1.72
ALYREF-201ENST00000504015 SLC39A2Q9NP94 309 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 KCNMB3Q9NPA1 279 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 GPCPD1Q9NPB8 672 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 PRDM10Q9NQV6 1147 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 AGPAT5Q9NUQ2 364 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 PANK4Q9NVE7 773 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 TMEM260Q9NX78 707 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.31□□□□□ -1.72
ALYREF-201ENST00000504015 CALCOCO1Q9P1Z2 691 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 CEP72Q9P209 647 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 PUF60Q9UHX1 559 aaKnown RBP4.31□□□□□ -1.72
ALYREF-201ENST00000504015 SERPINA10Q9UK55 444 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 FBXL5Q9UKA1 691 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 GUCA1BQ9UMX6 200 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 SNX12Q9UMY4 172 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 COL4A3BPQ9Y5P4 624 aa4.31□□□□□ -1.72
ALYREF-201ENST00000504015 BZW2Q9Y6E2 419 aaKnown RBP4.31□□□□□ -1.72
ALYREF-201ENST00000504015 KIF13BQ9NQT8 1826 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 ARFGEF1Q9Y6D6 1849 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 ATRNL1Q5VV63 1379 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 AFF2P51816 1311 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 FRMPD2Q68DX3 1309 aaPredicted RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 FRMD3A2A2Y4 597 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 GTPBP10A4D1E9 387 aaKnown RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 A6NNZ2 444 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 TULP1O00294 542 aaPredicted RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 TRAF5O00463 557 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 CES2O00748 559 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 PDXKO00764 312 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 CETN3O15182 167 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 SLC37A4O43826 429 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 AKR1B10O60218 316 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 PLA2G6O60733 806 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 PPP1R11O60927 126 aaPredicted RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 GFPT2O94808 682 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 CYP3A4P08684 503 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 PLA2G4BP0C869 781 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 FCER1AP12319 257 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 IDEP14735 1019 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 GAP43P17677 238 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 RPA1P27694 616 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 OAS2P29728 719 aaKnown RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 SREBF1P36956 1147 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 SLC1A4P43007 532 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 PAFAH1B1P43034 410 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 MAGEA1P43355 309 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 CRKP46108 304 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 AARSP49588 968 aaKnown RBP eCLIP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 KIF11P52732 1056 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 COASYQ13057 564 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 PICALMQ13492 652 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 CASP8Q14790 479 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 NFIL3Q16649 462 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 IFI16Q16666 785 aaKnown RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 CCDC96Q2M329 555 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 ASTE1Q2TB18 679 aaPredicted RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 TUBB8Q3ZCM7 444 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 CERKLQ49MI3 558 aaPredicted RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 CCDC40Q4G0X9 1142 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 STYK1Q6J9G0 422 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 STXBP4Q6ZWJ1 553 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 FRMD5Q7Z6J6 570 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 TRIM59Q8IWR1 403 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 LRRC47Q8N1G4 583 aaKnown RBP4.3□□□□□ -1.72
ALYREF-201ENST00000504015 MMGT1Q8N4V1 131 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 CERS5Q8N5B7 392 aa4.3□□□□□ -1.72
ALYREF-201ENST00000504015 GOLGA6L1Q8N7Z2 621 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms