RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 EZH2Q15910 746 aaKnown RBP16.55■□□□□ 0.24
SNF8-203ENST00000504000 SLC4A8Q2Y0W8 1093 aa16.55■□□□□ 0.24
SNF8-203ENST00000504000 DDX12PQ92771 950 aa16.55■□□□□ 0.24
SNF8-203ENST00000504000 GDAP1L1Q96MZ0 367 aa16.55■□□□□ 0.24
SNF8-203ENST00000504000 C10orf71Q711Q0 1435 aa16.55■□□□□ 0.24
SNF8-203ENST00000504000 BTNL10A8MVZ5 291 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 EIF3HO15372 352 aaKnown RBP eCLIP16.54■□□□□ 0.24
SNF8-203ENST00000504000 KCNQ2O43526 872 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 EDIL3O43854 480 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 HSF2BPO75031 334 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 SNHG28P0DPA3 235 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 ADCY7P51828 1080 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 GRAPQ13588 217 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 NAB2Q15742 525 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 MAPKAPK5Q8IW41 473 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 CD302Q8IX05 232 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 GRAPLQ8TC17 118 aaPredicted RBP16.54■□□□□ 0.24
SNF8-203ENST00000504000 DNAJC19Q96DA6 116 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 MTMR8Q96EF0 704 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 NAP1L4Q99733 375 aaKnown RBP16.54■□□□□ 0.24
SNF8-203ENST00000504000 SALL4Q9UJQ4 1053 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 PCDHGC5Q9Y5F6 944 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 ZEB2O60315 1214 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 NOP2P46087 812 aaKnown RBP16.54■□□□□ 0.24
SNF8-203ENST00000504000 GFPT1Q06210 699 aaPredicted RBP16.54■□□□□ 0.24
SNF8-203ENST00000504000 C10orf76Q5T2E6 689 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 SFMBT2Q5VUG0 894 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 SLF2Q8IX21 1173 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 ZC3H3Q8IXZ2 948 aaKnown RBP16.54■□□□□ 0.24
SNF8-203ENST00000504000 SNX29Q8TEQ0 813 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 CEP95Q96GE4 821 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 BMP2KQ9NSY1 1161 aaPredicted RBP16.54■□□□□ 0.24
SNF8-203ENST00000504000 AIPL1Q9NZN9 384 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 ATP6V0A2Q9Y487 856 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 CDK5RAP2Q96SN8 1893 aa16.54■□□□□ 0.24
SNF8-203ENST00000504000 ATXN2Q99700 1313 aaKnown RBP16.54■□□□□ 0.24
SNF8-203ENST00000504000 EBAG9O00559 213 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 ZPR1O75312 459 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 PDHBP11177 359 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 GCFC2P16383 781 aaKnown RBP16.53■□□□□ 0.24
SNF8-203ENST00000504000 BTDP43251 543 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 RASSF7Q02833 373 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 SLC18A3Q16572 532 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 FAM83BQ5T0W9 1011 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 DYMQ7RTS9 669 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 TRIM59Q8IWR1 403 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 IQCKQ8N0W5 287 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 RUFY1Q96T51 708 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 NT5C3AQ9H0P0 336 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 RBM12Q9NTZ6 932 aaKnown RBP16.53■□□□□ 0.24
SNF8-203ENST00000504000 ANKIB1Q9P2G1 1089 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 JAG2Q9Y219 1238 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 GRIN2DO15399 1336 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 ATP8B3O60423 1300 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 KDM3AQ9Y4C1 1321 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 ATAD5Q96QE3 1844 aa16.53■□□□□ 0.24
SNF8-203ENST00000504000 SLC37A4O43826 429 aa16.52■□□□□ 0.24
SNF8-203ENST00000504000 NOL4O94818 638 aa16.52■□□□□ 0.24
SNF8-203ENST00000504000 CLK2P49760 499 aaKnown RBP16.52■□□□□ 0.24
SNF8-203ENST00000504000 PAK2Q13177 524 aa16.52■□□□□ 0.24
SNF8-203ENST00000504000 TTC31Q49AM3 519 aaPredicted RBP16.52■□□□□ 0.24
SNF8-203ENST00000504000 PPP4R3CPQ6ZMV5 832 aa16.52■□□□□ 0.24
SNF8-203ENST00000504000 CPVLQ9H3G5 476 aa16.52■□□□□ 0.24
SNF8-203ENST00000504000 MYH10P35580 1976 aa16.52■□□□□ 0.23
SNF8-203ENST00000504000 SHTN1A0MZ66 631 aa16.52■□□□□ 0.23
SNF8-203ENST00000504000 SRRM3A6NNA2 597 aaPredicted RBP16.52■□□□□ 0.23
SNF8-203ENST00000504000 IL1R1P14778 569 aa16.52■□□□□ 0.23
SNF8-203ENST00000504000 SLC1A4P43007 532 aa16.52■□□□□ 0.23
SNF8-203ENST00000504000 COASYQ13057 564 aa16.52■□□□□ 0.23
SNF8-203ENST00000504000 GRIK5Q16478 980 aa16.52■□□□□ 0.23
SNF8-203ENST00000504000 FAM26FQ5R3K3 315 aa16.52■□□□□ 0.23
SNF8-203ENST00000504000 MEI1Q5TIA1 1274 aa16.52■□□□□ 0.23
SNF8-203ENST00000504000 SPATS2Q86XZ4 545 aaKnown RBP16.52■□□□□ 0.23
SNF8-203ENST00000504000 TEX11Q8IYF3 940 aa16.52■□□□□ 0.23
SNF8-203ENST00000504000 WHAMMQ8TF30 809 aa16.52■□□□□ 0.23
SNF8-203ENST00000504000 DRC1Q96MC2 740 aa16.52■□□□□ 0.23
SNF8-203ENST00000504000 TMEM260Q9NX78 707 aa16.52■□□□□ 0.23
SNF8-203ENST00000504000 SWAP70Q9UH65 585 aa16.52■□□□□ 0.23
SNF8-203ENST00000504000 SAP30BPQ9UHR5 308 aaKnown RBP16.52■□□□□ 0.23
SNF8-203ENST00000504000 MTMR7Q9Y216 660 aa16.52■□□□□ 0.23
SNF8-203ENST00000504000 NHSQ6T4R5 1651 aa16.52■□□□□ 0.23
SNF8-203ENST00000504000 GAKO14976 1311 aa16.52■□□□□ 0.23
SNF8-203ENST00000504000 USP17L5A8MUK1 530 aa16.51■□□□□ 0.23
SNF8-203ENST00000504000 TLR2O60603 784 aa16.51■□□□□ 0.23
SNF8-203ENST00000504000 TDP2O95551 362 aa16.51■□□□□ 0.23
SNF8-203ENST00000504000 TADA2BQ86TJ2 420 aa16.51■□□□□ 0.23
SNF8-203ENST00000504000 TSEN2Q8NCE0 465 aaKnown RBP16.51■□□□□ 0.23
SNF8-203ENST00000504000 MTMR4Q9NYA4 1195 aa16.51■□□□□ 0.23
SNF8-203ENST00000504000 PNMA6FA0A0J9YX94 578 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 POTEMA6NI47 508 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 TRAF5O00463 557 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 ANXA13P27216 316 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 CXCR5P32302 372 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 RHBDL3P58872 404 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 SLC7A5Q01650 507 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 EDRF1Q3B7T1 1238 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 TDRD12Q587J7 1177 aaKnown RBP16.5■□□□□ 0.23
SNF8-203ENST00000504000 ZBTB9Q96C00 473 aa16.5■□□□□ 0.23
SNF8-203ENST00000504000 INPP4AQ96PE3 977 aaPredicted RBP16.5■□□□□ 0.23
SNF8-203ENST00000504000 NUDT12Q9BQG2 462 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms