RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 GOLM1Q8NBJ4 401 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 SSH1Q8WYL5 1049 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 ARHGAP45Q92619 1136 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 NINJ1Q92982 152 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 HHIPQ96QV1 700 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 FERD3LQ96RJ6 166 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 TCF12Q99081 682 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 CDC5LQ99459 802 aaKnown RBP7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 TRIM56Q9BRZ2 755 aaKnown RBP7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 ZNF277Q9NRM2 450 aaPredicted RBP7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 PPT2Q9UMR5 302 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 XDHP47989 1333 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 ZBED9Q6R2W3 1325 aa7.15□□□□□ -1.26
TMEM39A-212ENST00000497993 PAPPA2Q9BXP8 1791 aa7.15□□□□□ -1.27
TMEM39A-212ENST00000497993 GRM8O00222 908 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 RASGRP1O95267 797 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 GDF11O95390 407 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 ELNP15502 786 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 GARTP22102 1010 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 FOXO4P98177 505 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 FAM117BQ6P1L5 589 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 DPP8Q6V1X1 898 aaPredicted RBP7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 UBE3BQ7Z3V4 1068 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 SMC1BQ8NDV3 1235 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 ST13P5Q8NFI4 369 aaPredicted RBP7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 WNT8BQ93098 351 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 KAZALD1Q96I82 304 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 KIF16BQ96L93 1317 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 PASKQ96RG2 1323 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 SENP7Q9BQF6 1050 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 PLCD4Q9BRC7 762 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 TAF1DQ9H5J8 278 aaPredicted RBP7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 SEC31BQ9NQW1 1179 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 SFMBT1Q9UHJ3 866 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 AKAP11Q9UKA4 1901 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 ZNRF3Q9ULT6 936 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 SOX13Q9UN79 622 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 PCNTO95613 3336 aa7.14□□□□□ -1.27
TMEM39A-212ENST00000497993 YDJCA8MPS7 323 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 PPIP5K2O43314 1243 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 DDNO94850 711 aaPredicted RBP7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 PF4P02776 101 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 IMPDH2P12268 514 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 CPEP16870 476 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 POU3F3P20264 500 aaPredicted RBP7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 LIG3P49916 1009 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 MMP14P50281 582 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 RARSP54136 660 aaKnown RBP7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 CAMK2GQ13555 558 aaPredicted RBP7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 AOC3Q16853 763 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 SEZ6Q53EL9 994 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 TMEM67Q5HYA8 995 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 AXDND1Q5T1B0 1012 aaPredicted RBP7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 SYCP2LQ5T4T6 812 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 FBXW10Q5XX13 1052 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 ADAMTSL4Q6UY14 1074 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 LDHDQ86WU2 507 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 ANKRD18AQ8IVF6 992 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 MYO1HQ8N1T3 1032 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 TMTC2Q8N394 836 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 TBC1D16Q8TBP0 767 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 ASAP3Q8TDY4 903 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 PPM1EQ8WY54 764 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 DPF2Q92785 391 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 NACC1Q96RE7 527 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 EYA3Q99504 573 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 CEP44Q9C0F1 390 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 TMX4Q9H1E5 349 aaPredicted RBP7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 ZFYVE1Q9HBF4 777 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 SH2B1Q9NRF2 756 aaPredicted RBP7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 POLLQ9UGP5 575 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 PGAP2Q9UHJ9 254 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 PFDN2Q9UHV9 154 aa7.13□□□□□ -1.27
TMEM39A-212ENST00000497993 MYH2Q9UKX2 1941 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 A0A096LPE4 126 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 A0A1W2PPZ6 126 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 H3BRJ5 948 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 LINC01387J3KSC0 135 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 TCERG1O14776 1098 aaKnown RBP7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 EIF4EBP3O60516 100 aaPredicted RBP7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 SCGB1D2O95969 90 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 FOSP01100 380 aaPredicted RBP7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 PTMSP20962 102 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 EPHA1P21709 976 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 RPS12P25398 132 aaKnown RBP7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 CRKP46108 304 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 ZNF165P49910 485 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 FCGRTP55899 365 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 GPSM2P81274 684 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 POU5F1BQ06416 359 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 CXCL9Q07325 125 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 MCL1Q07820 350 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 SEPT6Q14141 434 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 SETDB1Q15047 1291 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 ZC3H12BQ5HYM0 836 aaKnown RBP7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 PNMA8AQ86V59 439 aaPredicted RBP7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 CHPFQ8IZ52 775 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 KLHL23Q8NBE8 558 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 ATL2Q8NHH9 583 aa7.12□□□□□ -1.27
TMEM39A-212ENST00000497993 LRRC3Q9BY71 257 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms