RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 ATP8B4Q8TF62 1192 aa17■□□□□ 0.31
RNF220-218ENST00000497469 MEIS3Q99687 375 aa17■□□□□ 0.31
RNF220-218ENST00000497469 RTP3Q9BQQ7 232 aa17■□□□□ 0.31
RNF220-218ENST00000497469 ERVK-5Q9HDB9 667 aa17■□□□□ 0.31
RNF220-218ENST00000497469 FEM1BQ9UK73 627 aa17■□□□□ 0.31
RNF220-218ENST00000497469 ARIH2O95376 493 aa16.99■□□□□ 0.31
RNF220-218ENST00000497469 MMP3P08254 477 aa16.99■□□□□ 0.31
RNF220-218ENST00000497469 CTSHP09668 335 aa16.99■□□□□ 0.31
RNF220-218ENST00000497469 TECP42680 631 aa16.99■□□□□ 0.31
RNF220-218ENST00000497469 POMKQ9H5K3 350 aa16.99■□□□□ 0.31
RNF220-218ENST00000497469 RC3H2Q9HBD1 1191 aaKnown RBP16.99■□□□□ 0.31
RNF220-218ENST00000497469 ANGPTL2Q9UKU9 493 aa16.99■□□□□ 0.31
RNF220-218ENST00000497469 NKRFO15226 690 aaKnown RBP eCLIP16.98■□□□□ 0.31
RNF220-218ENST00000497469 PRKAB2O43741 272 aa16.98■□□□□ 0.31
RNF220-218ENST00000497469 SP9P0CG40 484 aa16.98■□□□□ 0.31
RNF220-218ENST00000497469 TXNP10599 105 aaKnown RBP16.98■□□□□ 0.31
RNF220-218ENST00000497469 TNNI3KQ59H18 835 aa16.98■□□□□ 0.31
RNF220-218ENST00000497469 LLGL2Q6P1M3 1020 aa16.98■□□□□ 0.31
RNF220-218ENST00000497469 SYCE2Q6PIF2 218 aa16.98■□□□□ 0.31
RNF220-218ENST00000497469 CHST3Q7LGC8 479 aa16.98■□□□□ 0.31
RNF220-218ENST00000497469 SIX5Q8N196 739 aa16.98■□□□□ 0.31
RNF220-218ENST00000497469 KLHL23Q8NBE8 558 aa16.98■□□□□ 0.31
RNF220-218ENST00000497469 PLVAPQ9BX97 442 aa16.98■□□□□ 0.31
RNF220-218ENST00000497469 GPR108Q9NPR9 543 aa16.98■□□□□ 0.31
RNF220-218ENST00000497469 TLR7Q9NYK1 1049 aaKnown RBP16.98■□□□□ 0.31
RNF220-218ENST00000497469 LIMD1Q9UGP4 676 aa16.98■□□□□ 0.31
RNF220-218ENST00000497469 MRPL42Q9Y6G3 142 aaKnown RBP16.98■□□□□ 0.31
RNF220-218ENST00000497469 FPGT-TNNI3KV9GXZ4 949 aa16.98■□□□□ 0.31
RNF220-218ENST00000497469 PRR5-ARHGAP8B1AHC4 643 aa16.97■□□□□ 0.31
RNF220-218ENST00000497469 STK25O00506 426 aa16.97■□□□□ 0.31
RNF220-218ENST00000497469 PPFIA3O75145 1194 aa16.97■□□□□ 0.31
RNF220-218ENST00000497469 PSEN2P49810 448 aa16.97■□□□□ 0.31
RNF220-218ENST00000497469 ARHGAP8P85298 464 aa16.97■□□□□ 0.31
RNF220-218ENST00000497469 LMNB2Q03252 620 aa16.97■□□□□ 0.31
RNF220-218ENST00000497469 VARS2Q5ST30 1063 aaKnown RBP16.97■□□□□ 0.31
RNF220-218ENST00000497469 ANKRD54Q6NXT1 300 aa16.97■□□□□ 0.31
RNF220-218ENST00000497469 C16orf86Q6ZW13 317 aa16.97■□□□□ 0.31
RNF220-218ENST00000497469 MICAL1Q8TDZ2 1067 aa16.97■□□□□ 0.31
RNF220-218ENST00000497469 USP18Q9UMW8 372 aa16.97■□□□□ 0.31
RNF220-218ENST00000497469 ASH1LQ9NR48 2969 aaKnown RBP16.97■□□□□ 0.31
RNF220-218ENST00000497469 MAST4O15021 2626 aa16.97■□□□□ 0.31
RNF220-218ENST00000497469 KIAA1671Q9BY89 1806 aa16.96■□□□□ 0.31
RNF220-218ENST00000497469 IGSF3O75054 1194 aa16.96■□□□□ 0.31
RNF220-218ENST00000497469 ZNF286BP0CG31 522 aa16.96■□□□□ 0.31
RNF220-218ENST00000497469 G3BP1Q13283 466 aaKnown RBP eCLIP16.96■□□□□ 0.31
RNF220-218ENST00000497469 BAATQ14032 418 aaPredicted RBP16.96■□□□□ 0.31
RNF220-218ENST00000497469 SPECC1Q5M775 1068 aa16.96■□□□□ 0.31
RNF220-218ENST00000497469 STK11IPQ8N1F8 1099 aa16.96■□□□□ 0.31
RNF220-218ENST00000497469 SCFD2Q8WU76 684 aa16.96■□□□□ 0.31
RNF220-218ENST00000497469 P2RX5Q93086 422 aa16.96■□□□□ 0.31
RNF220-218ENST00000497469 CLIP2Q9UDT6 1046 aa16.96■□□□□ 0.31
RNF220-218ENST00000497469 FBXL21Q9UKT6 434 aa16.96■□□□□ 0.31
RNF220-218ENST00000497469 BAZ2AQ9UIF9 1905 aaKnown RBP16.96■□□□□ 0.3
RNF220-218ENST00000497469 TMEM232C9JQI7 657 aa16.95■□□□□ 0.3
RNF220-218ENST00000497469 MFSD10Q14728 455 aa16.95■□□□□ 0.3
RNF220-218ENST00000497469 DUSP6Q16828 381 aa16.95■□□□□ 0.3
RNF220-218ENST00000497469 TKFCQ3LXA3 575 aa16.95■□□□□ 0.3
RNF220-218ENST00000497469 DHX37Q8IY37 1157 aaKnown RBP16.95■□□□□ 0.3
RNF220-218ENST00000497469 SSH1Q8WYL5 1049 aa16.95■□□□□ 0.3
RNF220-218ENST00000497469 ARMT1Q9H993 441 aa16.95■□□□□ 0.3
RNF220-218ENST00000497469 ZMIZ1Q9ULJ6 1067 aa16.95■□□□□ 0.3
RNF220-218ENST00000497469 KINO60870 393 aaKnown RBP16.94■□□□□ 0.3
RNF220-218ENST00000497469 WEE2P0C1S8 567 aa16.94■□□□□ 0.3
RNF220-218ENST00000497469 PDE4DQ08499 809 aa16.94■□□□□ 0.3
RNF220-218ENST00000497469 IKQ13123 557 aaPredicted RBP16.94■□□□□ 0.3
RNF220-218ENST00000497469 KIAA0753Q2KHM9 967 aa16.94■□□□□ 0.3
RNF220-218ENST00000497469 C12orf60Q5U649 245 aa16.94■□□□□ 0.3
RNF220-218ENST00000497469 ZNF512BQ96KM6 892 aaPredicted RBP16.94■□□□□ 0.3
RNF220-218ENST00000497469 ADD3Q9UEY8 706 aaKnown RBP16.94■□□□□ 0.3
RNF220-218ENST00000497469 GREB1LQ9C091 1923 aaPredicted RBP16.94■□□□□ 0.3
RNF220-218ENST00000497469 PLXNA4Q9HCM2 1894 aa16.93■□□□□ 0.3
RNF220-218ENST00000497469 PAN2Q504Q3 1202 aaKnown RBP16.93■□□□□ 0.3
RNF220-218ENST00000497469 SLC30A10Q6XR72 485 aa16.93■□□□□ 0.3
RNF220-218ENST00000497469 TDRD5Q8NAT2 981 aaKnown RBP16.93■□□□□ 0.3
RNF220-218ENST00000497469 ZNF689Q96CS4 500 aaPredicted RBP16.93■□□□□ 0.3
RNF220-218ENST00000497469 NYAP2Q9P242 653 aa16.93■□□□□ 0.3
RNF220-218ENST00000497469 DBNLQ9UJU6 430 aaKnown RBP16.93■□□□□ 0.3
RNF220-218ENST00000497469 FANCMQ8IYD8 2048 aa16.92■□□□□ 0.3
RNF220-218ENST00000497469 PROS1P07225 676 aa16.92■□□□□ 0.3
RNF220-218ENST00000497469 DCNP07585 359 aaKnown RBP16.92■□□□□ 0.3
RNF220-218ENST00000497469 PDE6AP16499 860 aa16.92■□□□□ 0.3
RNF220-218ENST00000497469 CASTP20810 708 aaKnown RBP16.92■□□□□ 0.3
RNF220-218ENST00000497469 ARHGAP1Q07960 439 aa16.92■□□□□ 0.3
RNF220-218ENST00000497469 DDX10Q13206 875 aaKnown RBP16.92■□□□□ 0.3
RNF220-218ENST00000497469 LY6KQ17RY6 165 aa16.92■□□□□ 0.3
RNF220-218ENST00000497469 CEP295Q9C0D2 2601 aa16.91■□□□□ 0.3
RNF220-218ENST00000497469 PTPDC1A2A3K4 754 aa16.91■□□□□ 0.3
RNF220-218ENST00000497469 CYSRT1A8MQ03 144 aa16.91■□□□□ 0.3
RNF220-218ENST00000497469 NFIBO00712 420 aa16.91■□□□□ 0.3
RNF220-218ENST00000497469 BMP3P12645 472 aa16.91■□□□□ 0.3
RNF220-218ENST00000497469 RFX1P22670 979 aa16.91■□□□□ 0.3
RNF220-218ENST00000497469 CALML3P27482 149 aa16.91■□□□□ 0.3
RNF220-218ENST00000497469 SERINC5Q86VE9 423 aa16.91■□□□□ 0.3
RNF220-218ENST00000497469 GPR161Q8N6U8 529 aaKnown RBP16.91■□□□□ 0.3
RNF220-218ENST00000497469 CCDC8Q9H0W5 538 aaPredicted RBP16.91■□□□□ 0.3
RNF220-218ENST00000497469 PARD6AQ9NPB6 346 aa16.91■□□□□ 0.3
RNF220-218ENST00000497469 CCPG1Q9ULG6 757 aa16.91■□□□□ 0.3
RNF220-218ENST00000497469 ZNF532Q9HCE3 1301 aa16.91■□□□□ 0.3
RNF220-218ENST00000497469 PNMA6EA0A0J9YXQ4 647 aa16.9■□□□□ 0.3
RNF220-218ENST00000497469 POTEMA6NI47 508 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms