RNA–Protein interactions for RNA: ENST00000497089.1

HOXA9-206, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 1,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-206ENST00000497089 MYH1P12882 1939 aa7.73□□□□□ -1.17
HOXA9-206ENST00000497089 SASH3O75995 380 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 BCRP11274 1271 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 ATP5JP18859 108 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 CYP7A1P22680 504 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 VAMP1P23763 118 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 PRMT2P55345 433 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 ZNF445P59923 1031 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 DYNLL1P63167 89 aaKnown RBP7.72□□□□□ -1.17
HOXA9-206ENST00000497089 PSMD2Q13200 908 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 RRP1BQ14684 758 aaKnown RBP7.72□□□□□ -1.17
HOXA9-206ENST00000497089 DDX60LQ5H9U9 1706 aaKnown RBP7.72□□□□□ -1.17
HOXA9-206ENST00000497089 ZNF468Q5VIY5 522 aaPredicted RBP7.72□□□□□ -1.17
HOXA9-206ENST00000497089 PDCL2Q8N4E4 241 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 MAGEB6Q8N7X4 407 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 TGFBRAP1Q8WUH2 860 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 PDLIM2Q96JY6 352 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 PARK7Q99497 189 aaKnown RBP7.72□□□□□ -1.17
HOXA9-206ENST00000497089 RIOK1Q9BRS2 568 aaKnown RBP7.72□□□□□ -1.17
HOXA9-206ENST00000497089 YY1AP1Q9H869 796 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.72□□□□□ -1.17
HOXA9-206ENST00000497089 AVENQ9NQS1 362 aaPredicted RBP7.72□□□□□ -1.17
HOXA9-206ENST00000497089 PRR12Q9ULL5 1215 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 KIF3AQ9Y496 699 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 HTTP42858 3142 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 KIAA0100Q14667 2235 aaKnown RBP7.72□□□□□ -1.17
HOXA9-206ENST00000497089 ZSWIM8A7E2V4 1837 aa7.72□□□□□ -1.17
HOXA9-206ENST00000497089 CLGNO14967 610 aa7.71□□□□□ -1.17
HOXA9-206ENST00000497089 ASNSP08243 561 aa7.71□□□□□ -1.17
HOXA9-206ENST00000497089 IFIT2P09913 472 aaKnown RBP7.71□□□□□ -1.17
HOXA9-206ENST00000497089 ARAFP10398 606 aa7.71□□□□□ -1.17
HOXA9-206ENST00000497089 KIF22Q14807 665 aa7.71□□□□□ -1.17
HOXA9-206ENST00000497089 KLHL40Q2TBA0 621 aa7.71□□□□□ -1.17
HOXA9-206ENST00000497089 ZNF771Q7L3S4 317 aaPredicted RBP7.71□□□□□ -1.17
HOXA9-206ENST00000497089 KRT25Q7Z3Z0 450 aa7.71□□□□□ -1.17
HOXA9-206ENST00000497089 MAPKAPK5Q8IW41 473 aa7.71□□□□□ -1.17
HOXA9-206ENST00000497089 FRMD6Q96NE9 622 aa7.71□□□□□ -1.17
HOXA9-206ENST00000497089 WDR18Q9BV38 432 aa7.71□□□□□ -1.17
HOXA9-206ENST00000497089 EHD4Q9H223 541 aa7.71□□□□□ -1.17
HOXA9-206ENST00000497089 DCTPP1Q9H773 170 aa7.71□□□□□ -1.17
HOXA9-206ENST00000497089 DNAJC18Q9H819 358 aa7.71□□□□□ -1.17
HOXA9-206ENST00000497089 MGAMO43451 1857 aa7.71□□□□□ -1.17
HOXA9-206ENST00000497089 MYH7P12883 1935 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 TCRBV5S4A2TA0A5A2 114 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 TRIM75PA6NK02 468 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 RARAP10276 462 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 PDE6AP16499 860 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 CES1P23141 567 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 CTGFP29279 349 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 SOX10P56693 466 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 SLC9C2Q5TAH2 1124 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 TATDN1Q6P1N9 297 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 SKAP1Q86WV1 359 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 MIGA1Q8NAN2 632 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 SNX21Q969T3 373 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 ACDQ96AP0 544 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 TIGD1Q96MW7 591 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 HAUS7Q99871 368 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 OXCT2Q9BYC2 517 aaPredicted RBP7.71□□□□□ -1.18
HOXA9-206ENST00000497089 LRRCC1Q9C099 1032 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 ARHGAP39Q9C0H5 1083 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 CALCOCO1Q9P1Z2 691 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.71□□□□□ -1.18
HOXA9-206ENST00000497089 CPA4Q9UI42 421 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 PALD1Q9ULE6 856 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 AGTPBP1Q9UPW5 1226 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 PTCH2Q9Y6C5 1203 aa7.71□□□□□ -1.18
HOXA9-206ENST00000497089 GOLIM4O00461 696 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 SORBS3O60504 671 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 HLA-DOAP06340 250 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 CYP2C8P10632 490 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 TARSP26639 723 aaKnown RBP7.7□□□□□ -1.18
HOXA9-206ENST00000497089 ADH6P28332 368 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 GNA15P30679 374 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 JAG1P78504 1218 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 DAB2P98082 770 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 SPP2Q13103 211 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 RAB3GAP1Q15042 981 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 CLEC17AQ6ZS10 378 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 RAB44Q7Z6P3 723 aaPredicted RBP7.7□□□□□ -1.18
HOXA9-206ENST00000497089 SYT9Q86SS6 491 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 TTC6Q86TZ1 520 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 CCDC84Q86UT8 332 aaPredicted RBP7.7□□□□□ -1.18
HOXA9-206ENST00000497089 GAS2L3Q86XJ1 694 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 SMC5Q8IY18 1101 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 CRACR2BQ8N4Y2 399 aaPredicted RBP7.7□□□□□ -1.18
HOXA9-206ENST00000497089 C1orf127Q8N9H9 656 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 CCDC74AQ96AQ1 378 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 ZNF333Q96JL9 665 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 AS3MTQ9HBK9 375 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 PAG1Q9NWQ8 432 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 CGNQ9P2M7 1197 aaKnown RBP7.7□□□□□ -1.18
HOXA9-206ENST00000497089 VTI1BQ9UEU0 232 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 SRRDQ9UH36 339 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 KLF15Q9UIH9 416 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 SERPINB13Q9UIV8 391 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 GDF2Q9UK05 429 aaPredicted RBP7.7□□□□□ -1.18
HOXA9-206ENST00000497089 ZBTB21Q9ULJ3 1066 aa7.7□□□□□ -1.18
HOXA9-206ENST00000497089 NAV1Q8NEY1 1877 aa7.69□□□□□ -1.18
HOXA9-206ENST00000497089 ZNF532Q9HCE3 1301 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms