RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 ZNF862O60290 1169 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 CTNND1O60716 968 aaKnown RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 PQBP1O60828 265 aaKnown RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 OFD1O75665 1012 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 TUSC2O75896 110 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 ECEL1O95672 775 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 TBC1D8O95759 1140 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 CPP00450 1065 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 CD4P01730 458 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 F11P03951 625 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 TP53P04637 393 aaPredicted RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 CTSBP07858 339 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 MYBP10242 640 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 CCND1P24385 295 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 GRK4P32298 578 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 CASP5P51878 434 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 TERF1P54274 439 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 FAM193AP78312 1265 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 TNFAIP2Q03169 654 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 TNP2Q05952 138 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 PDE4BQ07343 736 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 SPEM2Q0P670 501 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 LAMC2Q13753 1193 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 R3HDM1Q15032 1099 aaKnown RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 TESK1Q15569 626 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 KIF4BQ2VIQ3 1234 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 FAM133BQ5BKY9 247 aaKnown RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 GPATCH4Q5T3I0 446 aaKnown RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 ARMC3Q5W041 872 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 RETSATQ6NUM9 610 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 SWSAP1Q6NVH7 229 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 RSRC2Q7L4I2 434 aaKnown RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 GET4Q7L5D6 327 aaPredicted RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 HDXQ7Z353 690 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 PRICKLE2Q7Z3G6 844 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 DEFB132Q7Z7B7 95 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 DDX53Q86TM3 631 aaKnown RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 PTRH1Q86Y79 214 aaKnown RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 CDAN1Q8IWY9 1227 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 MRPL41Q8IXM3 137 aaKnown RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 CMIPQ8IY22 773 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 TRIM22Q8IYM9 498 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 OR8H2Q8N162 312 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 EFHBQ8N7U6 833 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 KIAA1958Q8N8K9 716 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 IGSF22Q8N9C0 903 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 SPATA5Q8NB90 893 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 TMEM145Q8NBT3 493 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 PPP1R35Q8TAP8 253 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 NSUN6Q8TEA1 469 aaKnown RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 LMBR1Q8WVP7 490 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 KCTD13Q8WZ19 329 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 JADE3Q92613 823 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 PKNOX2Q96KN3 472 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 DHRS1Q96LJ7 313 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 CCDC138Q96M89 665 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 RIPOR3Q96MK2 946 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 CELF4Q9BZC1 486 aaKnown RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 NKX2-4Q9H2Z4 354 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 CCDC86Q9H6F5 360 aaKnown RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 SOX17Q9H6I2 414 aaPredicted RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 RETREG1Q9H6L5 497 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 KIAA1586Q9HCI6 787 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 GPAMQ9HCL2 828 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 ZNF277Q9NRM2 450 aaPredicted RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 TOPORSQ9NS56 1045 aaPredicted RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 MKS1Q9NXB0 559 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 RRN3Q9NYV6 651 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 PKD2L1Q9P0L9 805 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 H2AFY2Q9P0M6 372 aaPredicted RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 WHRNQ9P202 907 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 LRP2BPQ9P2M1 347 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 TJP2Q9UDY2 1190 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 CGGBP1Q9UFW8 167 aaPredicted RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 TMX2Q9Y320 296 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 ZNF451Q9Y4E5 1061 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 CTDP1Q9Y5B0 961 aaPredicted RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 PCDHGB6Q9Y5F9 930 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 PCDHA9Q9Y5H5 950 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 WASHC2AQ641Q2 1341 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 RTEL1-TNFRSF6BF6WH68 1400 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 FHOD3Q2V2M9 1422 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 FAM135BQ49AJ0 1406 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 TRAPPC8Q9Y2L5 1435 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 UHRF1BP1LA0JNW5 1464 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 TCOF1Q13428 1488 aaKnown RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 RAPGEF2Q9Y4G8 1499 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 CEP170BQ9Y4F5 1589 aaPredicted RBP2.3□□□□□ -2.04
UBR4-217ENST00000497018 WIZO95785 1651 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 KAT6BQ8WYB5 2073 aa2.3□□□□□ -2.04
UBR4-217ENST00000497018 STRCP1A6NGW2 1772 aa2.29□□□□□ -2.04
UBR4-217ENST00000497018 KIF14Q15058 1648 aa2.29□□□□□ -2.04
UBR4-217ENST00000497018 UNC13BO14795 1591 aa2.29□□□□□ -2.04
UBR4-217ENST00000497018 LRRC9Q6ZRR7 1453 aa2.29□□□□□ -2.04
UBR4-217ENST00000497018 FHAD1B1AJZ9 1412 aa2.29□□□□□ -2.04
UBR4-217ENST00000497018 ITIH6Q6UXX5 1313 aa2.29□□□□□ -2.04
UBR4-217ENST00000497018 A0A087WV62 115 aa2.29□□□□□ -2.04
UBR4-217ENST00000497018 DCDC2BA2VCK2 349 aa2.29□□□□□ -2.04
UBR4-217ENST00000497018 FIGNL2A6NMB9 653 aa2.29□□□□□ -2.04
UBR4-217ENST00000497018 TTLL8A6PVC2 850 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms