RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 C16orf59Q7L2K0 433 aa18.09■□□□□ 0.49
HDAC4-213ENST00000496347 HEATR3Q7Z4Q2 680 aa18.09■□□□□ 0.49
HDAC4-213ENST00000496347 ZNF713Q8N859 430 aaPredicted RBP18.09■□□□□ 0.49
HDAC4-213ENST00000496347 KAT2BQ92831 832 aa18.09■□□□□ 0.49
HDAC4-213ENST00000496347 SPATA33Q96N06 139 aa18.09■□□□□ 0.49
HDAC4-213ENST00000496347 BRPF3Q9ULD4 1205 aa18.09■□□□□ 0.49
HDAC4-213ENST00000496347 NOD1Q9Y239 953 aa18.09■□□□□ 0.49
HDAC4-213ENST00000496347 UNC80Q8N2C7 3258 aa18.09■□□□□ 0.49
HDAC4-213ENST00000496347 CHD7Q9P2D1 2997 aa18.09■□□□□ 0.49
HDAC4-213ENST00000496347 TRIP12Q14669 1992 aaPredicted RBP18.08■□□□□ 0.49
HDAC4-213ENST00000496347 GBF1Q92538 1859 aa18.08■□□□□ 0.49
HDAC4-213ENST00000496347 KLF18A0A0U1RQI7 1052 aa18.08■□□□□ 0.48
HDAC4-213ENST00000496347 GOLGA8AA7E2F4 631 aa18.08■□□□□ 0.48
HDAC4-213ENST00000496347 GOLGA8BA8MQT2 603 aa18.08■□□□□ 0.48
HDAC4-213ENST00000496347 PPFIA4O75335 1185 aa18.08■□□□□ 0.48
HDAC4-213ENST00000496347 ZNF286BP0CG31 522 aa18.08■□□□□ 0.48
HDAC4-213ENST00000496347 CYP2C9P11712 490 aa18.08■□□□□ 0.48
HDAC4-213ENST00000496347 RFC2P35250 354 aa18.08■□□□□ 0.48
HDAC4-213ENST00000496347 MRPS9P82933 396 aaKnown RBP18.08■□□□□ 0.48
HDAC4-213ENST00000496347 FGD1P98174 961 aa18.08■□□□□ 0.48
HDAC4-213ENST00000496347 BFSP2Q13515 415 aa18.08■□□□□ 0.48
HDAC4-213ENST00000496347 METTL7BQ6UX53 244 aa18.08■□□□□ 0.48
HDAC4-213ENST00000496347 FBXL16Q8N461 479 aa18.08■□□□□ 0.48
HDAC4-213ENST00000496347 CCDC155Q8N6L0 562 aa18.08■□□□□ 0.48
HDAC4-213ENST00000496347 HERVK_113Q902F9 699 aa18.08■□□□□ 0.48
HDAC4-213ENST00000496347 JAKMIP1Q96N16 626 aaKnown RBP18.08■□□□□ 0.48
HDAC4-213ENST00000496347 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.07■□□□□ 0.48
HDAC4-213ENST00000496347 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.07■□□□□ 0.48
HDAC4-213ENST00000496347 SPDYE3A6NKU9 549 aa18.07■□□□□ 0.48
HDAC4-213ENST00000496347 ACRP10323 421 aa18.07■□□□□ 0.48
HDAC4-213ENST00000496347 CCL23P55773 120 aa18.07■□□□□ 0.48
HDAC4-213ENST00000496347 FUT2Q10981 343 aa18.07■□□□□ 0.48
HDAC4-213ENST00000496347 NEDD9Q14511 834 aa18.07■□□□□ 0.48
HDAC4-213ENST00000496347 MFSD10Q14728 455 aa18.07■□□□□ 0.48
HDAC4-213ENST00000496347 BLOC1S2Q6QNY1 142 aa18.07■□□□□ 0.48
HDAC4-213ENST00000496347 ZNF365Q70YC5 407 aa18.07■□□□□ 0.48
HDAC4-213ENST00000496347 RPUSD2Q8IZ73 545 aaKnown RBP18.07■□□□□ 0.48
HDAC4-213ENST00000496347 CCDC82Q8N4S0 544 aa18.07■□□□□ 0.48
HDAC4-213ENST00000496347 CAGE1Q8TC20 777 aa18.07■□□□□ 0.48
HDAC4-213ENST00000496347 EHMT1Q9H9B1 1298 aa18.07■□□□□ 0.48
HDAC4-213ENST00000496347 GTF2IRD1Q9UHL9 959 aa18.07■□□□□ 0.48
HDAC4-213ENST00000496347 SNX14Q9Y5W7 946 aa18.07■□□□□ 0.48
HDAC4-213ENST00000496347 PRUNE2Q8WUY3 3088 aa18.07■□□□□ 0.48
HDAC4-213ENST00000496347 CCDC196A0A1B0GTZ2 297 aa18.06■□□□□ 0.48
HDAC4-213ENST00000496347 SPATA31C2B4DYI2 1134 aa18.06■□□□□ 0.48
HDAC4-213ENST00000496347 HAS3O00219 553 aa18.06■□□□□ 0.48
HDAC4-213ENST00000496347 NOP56O00567 594 aaKnown RBP18.06■□□□□ 0.48
HDAC4-213ENST00000496347 PSEN2P49810 448 aa18.06■□□□□ 0.48
HDAC4-213ENST00000496347 SP2Q02086 613 aa18.06■□□□□ 0.48
HDAC4-213ENST00000496347 RBL2Q08999 1139 aa18.06■□□□□ 0.48
HDAC4-213ENST00000496347 PTGISQ16647 500 aa18.06■□□□□ 0.48
HDAC4-213ENST00000496347 KIAA0753Q2KHM9 967 aa18.06■□□□□ 0.48
HDAC4-213ENST00000496347 HSDL1Q3SXM5 330 aa18.06■□□□□ 0.48
HDAC4-213ENST00000496347 WWC2Q6AWC2 1192 aa18.06■□□□□ 0.48
HDAC4-213ENST00000496347 C7orf31Q8N865 590 aa18.06■□□□□ 0.48
HDAC4-213ENST00000496347 GPKOWQ92917 476 aaPredicted RBP eCLIP18.06■□□□□ 0.48
HDAC4-213ENST00000496347 CDHR1Q96JP9 859 aa18.06■□□□□ 0.48
HDAC4-213ENST00000496347 GUCD1Q96NT3 240 aa18.06■□□□□ 0.48
HDAC4-213ENST00000496347 SENP7Q9BQF6 1050 aa18.06■□□□□ 0.48
HDAC4-213ENST00000496347 MLXIPQ9HAP2 919 aa18.06■□□□□ 0.48
HDAC4-213ENST00000496347 CUL9Q8IWT3 2517 aa18.05■□□□□ 0.48
HDAC4-213ENST00000496347 hCG_1642624A0A1W2PR95 340 aa18.05■□□□□ 0.48
HDAC4-213ENST00000496347 DNAJB2P25686 324 aa18.05■□□□□ 0.48
HDAC4-213ENST00000496347 PSMA5P28066 241 aa18.05■□□□□ 0.48
HDAC4-213ENST00000496347 METAP2P50579 478 aaKnown RBP eCLIP18.05■□□□□ 0.48
HDAC4-213ENST00000496347 NAPAP54920 295 aa18.05■□□□□ 0.48
HDAC4-213ENST00000496347 CHMP4BP1P59074 171 aa18.05■□□□□ 0.48
HDAC4-213ENST00000496347 SEMA3FQ13275 785 aa18.05■□□□□ 0.48
HDAC4-213ENST00000496347 GDF6Q6KF10 455 aaPredicted RBP18.05■□□□□ 0.48
HDAC4-213ENST00000496347 NLRX1Q86UT6 975 aa18.05■□□□□ 0.48
HDAC4-213ENST00000496347 GIMAP8Q8ND71 665 aaPredicted RBP18.05■□□□□ 0.48
HDAC4-213ENST00000496347 AFAP1L1Q8TED9 768 aa18.05■□□□□ 0.48
HDAC4-213ENST00000496347 GPRASP2Q96D09 838 aa18.05■□□□□ 0.48
HDAC4-213ENST00000496347 CTAGE1Q96RT6 745 aa18.05■□□□□ 0.48
HDAC4-213ENST00000496347 GLT8D2Q9H1C3 349 aa18.05■□□□□ 0.48
HDAC4-213ENST00000496347 TET1Q8NFU7 2136 aa18.04■□□□□ 0.48
HDAC4-213ENST00000496347 FGBP02675 491 aa18.04■□□□□ 0.48
HDAC4-213ENST00000496347 RPS6KB1P23443 525 aa18.04■□□□□ 0.48
HDAC4-213ENST00000496347 UBE2SQ16763 222 aa18.04■□□□□ 0.48
HDAC4-213ENST00000496347 RETREG2Q8NC44 543 aa18.04■□□□□ 0.48
HDAC4-213ENST00000496347 BRF1Q92994 677 aa18.04■□□□□ 0.48
HDAC4-213ENST00000496347 SCLYQ96I15 445 aa18.04■□□□□ 0.48
HDAC4-213ENST00000496347 AGXT2Q9BYV1 514 aa18.04■□□□□ 0.48
HDAC4-213ENST00000496347 PPP4R2Q9NY27 417 aa18.04■□□□□ 0.48
HDAC4-213ENST00000496347 BARHL2Q9NY43 387 aa18.04■□□□□ 0.48
HDAC4-213ENST00000496347 MYO9BQ13459 2157 aa18.03■□□□□ 0.48
HDAC4-213ENST00000496347 STXBP3O00186 592 aa18.03■□□□□ 0.48
HDAC4-213ENST00000496347 PARNO95453 639 aaKnown RBP18.03■□□□□ 0.48
HDAC4-213ENST00000496347 LGALS2P05162 132 aa18.03■□□□□ 0.48
HDAC4-213ENST00000496347 ADCY7P51828 1080 aa18.03■□□□□ 0.48
HDAC4-213ENST00000496347 Q6ZUG5 572 aa18.03■□□□□ 0.48
HDAC4-213ENST00000496347 PPP1R13LQ8WUF5 828 aa18.03■□□□□ 0.48
HDAC4-213ENST00000496347 TIFAQ96CG3 184 aa18.03■□□□□ 0.48
HDAC4-213ENST00000496347 ZFP91Q96JP5 570 aaPredicted RBP18.03■□□□□ 0.48
HDAC4-213ENST00000496347 C16orf70Q9BSU1 422 aa18.03■□□□□ 0.48
HDAC4-213ENST00000496347 USP26Q9BXU7 913 aa18.03■□□□□ 0.48
HDAC4-213ENST00000496347 TTYH1Q9H313 450 aaPredicted RBP18.03■□□□□ 0.48
HDAC4-213ENST00000496347 RIC8AQ9NPQ8 531 aa18.03■□□□□ 0.48
HDAC4-213ENST00000496347 FAM217BQ9NTX9 383 aaPredicted RBP18.03■□□□□ 0.48
HDAC4-213ENST00000496347 CXXC1Q9P0U4 656 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms