RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 FBXL16Q8N461 479 aa27.88■■■□□ 2.05
HLA-C-209ENST00000495835 CCDC155Q8N6L0 562 aa27.88■■■□□ 2.05
HLA-C-209ENST00000495835 SPATA33Q96N06 139 aa27.88■■■□□ 2.05
HLA-C-209ENST00000495835 SEMA6BQ9H3T3 888 aa27.88■■■□□ 2.05
HLA-C-209ENST00000495835 MLXIPQ9HAP2 919 aa27.88■■■□□ 2.05
HLA-C-209ENST00000495835 NOD1Q9Y239 953 aa27.88■■■□□ 2.05
HLA-C-209ENST00000495835 SPATA31C2B4DYI2 1134 aa27.87■■■□□ 2.05
HLA-C-209ENST00000495835 hCG_1984214I3L0E3 225 aa27.87■■■□□ 2.05
HLA-C-209ENST00000495835 HAS3O00219 553 aa27.87■■■□□ 2.05
HLA-C-209ENST00000495835 FIBPO43427 364 aa27.87■■■□□ 2.05
HLA-C-209ENST00000495835 ACRP10323 421 aa27.87■■■□□ 2.05
HLA-C-209ENST00000495835 UBA1P22314 1058 aaKnown RBP27.87■■■□□ 2.05
HLA-C-209ENST00000495835 RTN1Q16799 776 aa27.87■■■□□ 2.05
HLA-C-209ENST00000495835 CCDC82Q8N4S0 544 aa27.87■■■□□ 2.05
HLA-C-209ENST00000495835 ZNF713Q8N859 430 aaPredicted RBP27.87■■■□□ 2.05
HLA-C-209ENST00000495835 RETREG2Q8NC44 543 aa27.87■■■□□ 2.05
HLA-C-209ENST00000495835 CAGE1Q8TC20 777 aa27.87■■■□□ 2.05
HLA-C-209ENST00000495835 SENP7Q9BQF6 1050 aa27.87■■■□□ 2.05
HLA-C-209ENST00000495835 BRPF3Q9ULD4 1205 aa27.87■■■□□ 2.05
HLA-C-209ENST00000495835 PSEN2P49810 448 aa27.86■■■□□ 2.05
HLA-C-209ENST00000495835 PTGISQ16647 500 aa27.86■■■□□ 2.05
HLA-C-209ENST00000495835 HSDL1Q3SXM5 330 aa27.86■■■□□ 2.05
HLA-C-209ENST00000495835 C7orf31Q8N865 590 aa27.86■■■□□ 2.05
HLA-C-209ENST00000495835 GTF2IRD1Q9UHL9 959 aa27.86■■■□□ 2.05
HLA-C-209ENST00000495835 PPP1R18Q6NYC8 613 aa27.85■■■□□ 2.05
HLA-C-209ENST00000495835 NLRX1Q86UT6 975 aa27.85■■■□□ 2.05
HLA-C-209ENST00000495835 RAB11FIP4Q86YS3 637 aa27.85■■■□□ 2.05
HLA-C-209ENST00000495835 GIMAP8Q8ND71 665 aaPredicted RBP27.85■■■□□ 2.05
HLA-C-209ENST00000495835 SNX14Q9Y5W7 946 aa27.85■■■□□ 2.05
HLA-C-209ENST00000495835 CNTNAP5Q8WYK1 1306 aa27.85■■■□□ 2.05
HLA-C-209ENST00000495835 KLF18A0A0U1RQI7 1052 aa27.84■■■□□ 2.05
HLA-C-209ENST00000495835 CCDC196A0A1B0GTZ2 297 aa27.84■■■□□ 2.05
HLA-C-209ENST00000495835 PARNO95453 639 aaKnown RBP27.84■■■□□ 2.05
HLA-C-209ENST00000495835 PSMA5P28066 241 aa27.84■■■□□ 2.05
HLA-C-209ENST00000495835 FGD1P98174 961 aa27.84■■■□□ 2.05
HLA-C-209ENST00000495835 FUT2Q10981 343 aa27.84■■■□□ 2.05
HLA-C-209ENST00000495835 MFSD10Q14728 455 aa27.84■■■□□ 2.05
HLA-C-209ENST00000495835 KIAA0753Q2KHM9 967 aa27.84■■■□□ 2.05
HLA-C-209ENST00000495835 METTL7BQ6UX53 244 aa27.84■■■□□ 2.05
HLA-C-209ENST00000495835 CDHR1Q96JP9 859 aa27.84■■■□□ 2.05
HLA-C-209ENST00000495835 TCEANC2Q96MN5 208 aa27.84■■■□□ 2.05
HLA-C-209ENST00000495835 GUCD1Q96NT3 240 aa27.84■■■□□ 2.05
HLA-C-209ENST00000495835 MAFGO15525 162 aa27.83■■■□□ 2.05
HLA-C-209ENST00000495835 DNAJB2P25686 324 aa27.83■■■□□ 2.05
HLA-C-209ENST00000495835 RBL2Q08999 1139 aa27.83■■■□□ 2.05
HLA-C-209ENST00000495835 GDF6Q6KF10 455 aaPredicted RBP27.83■■■□□ 2.05
HLA-C-209ENST00000495835 BLOC1S2Q6QNY1 142 aa27.83■■■□□ 2.05
HLA-C-209ENST00000495835 HEATR3Q7Z4Q2 680 aa27.83■■■□□ 2.05
HLA-C-209ENST00000495835 AFAP1L1Q8TED9 768 aa27.83■■■□□ 2.05
HLA-C-209ENST00000495835 GPRASP2Q96D09 838 aa27.83■■■□□ 2.05
HLA-C-209ENST00000495835 SCLYQ96I15 445 aa27.83■■■□□ 2.05
HLA-C-209ENST00000495835 USP26Q9BXU7 913 aa27.83■■■□□ 2.05
HLA-C-209ENST00000495835 GLT8D2Q9H1C3 349 aa27.83■■■□□ 2.05
HLA-C-209ENST00000495835 EHMT1Q9H9B1 1298 aa27.83■■■□□ 2.05
HLA-C-209ENST00000495835 SPDYE3A6NKU9 549 aa27.82■■■□□ 2.04
HLA-C-209ENST00000495835 GOLGA8AA7E2F4 631 aa27.82■■■□□ 2.04
HLA-C-209ENST00000495835 GOLGA8BA8MQT2 603 aa27.82■■■□□ 2.04
HLA-C-209ENST00000495835 IQCF3P0C7M6 154 aa27.82■■■□□ 2.04
HLA-C-209ENST00000495835 CHMP4BP1P59074 171 aa27.82■■■□□ 2.04
HLA-C-209ENST00000495835 GPKOWQ92917 476 aaPredicted RBP eCLIP27.82■■■□□ 2.04
HLA-C-209ENST00000495835 ZFP91Q96JP5 570 aaPredicted RBP27.82■■■□□ 2.04
HLA-C-209ENST00000495835 JAKMIP1Q96N16 626 aaKnown RBP27.82■■■□□ 2.04
HLA-C-209ENST00000495835 C16orf70Q9BSU1 422 aa27.82■■■□□ 2.04
HLA-C-209ENST00000495835 TTYH1Q9H313 450 aaPredicted RBP27.82■■■□□ 2.04
HLA-C-209ENST00000495835 RTEL1Q9NZ71 1219 aa27.82■■■□□ 2.04
HLA-C-209ENST00000495835 HDAC6Q9UBN7 1215 aa27.82■■■□□ 2.04
HLA-C-209ENST00000495835 TANC1Q9C0D5 1861 aa27.81■■■□□ 2.04
HLA-C-209ENST00000495835 hCG_1642624A0A1W2PR95 340 aa27.81■■■□□ 2.04
HLA-C-209ENST00000495835 SEMA3FQ13275 785 aa27.81■■■□□ 2.04
HLA-C-209ENST00000495835 VWCEQ96DN2 955 aa27.81■■■□□ 2.04
HLA-C-209ENST00000495835 CTAGE1Q96RT6 745 aa27.81■■■□□ 2.04
HLA-C-209ENST00000495835 ALG1Q9BT22 464 aa27.81■■■□□ 2.04
HLA-C-209ENST00000495835 AGXT2Q9BYV1 514 aa27.81■■■□□ 2.04
HLA-C-209ENST00000495835 TRIP12Q14669 1992 aaPredicted RBP27.8■■■□□ 2.04
HLA-C-209ENST00000495835 NOP56O00567 594 aaKnown RBP27.8■■■□□ 2.04
HLA-C-209ENST00000495835 FOSP01100 380 aaPredicted RBP27.8■■■□□ 2.04
HLA-C-209ENST00000495835 ZNF286BP0CG31 522 aa27.8■■■□□ 2.04
HLA-C-209ENST00000495835 ACTN1P12814 892 aa27.8■■■□□ 2.04
HLA-C-209ENST00000495835 PTK7Q13308 1070 aa27.8■■■□□ 2.04
HLA-C-209ENST00000495835 RAB30Q15771 203 aa27.8■■■□□ 2.04
HLA-C-209ENST00000495835 Q6ZUG5 572 aa27.8■■■□□ 2.04
HLA-C-209ENST00000495835 OTOP2Q7RTS6 562 aa27.8■■■□□ 2.04
HLA-C-209ENST00000495835 FAM161BQ96MY7 647 aa27.8■■■□□ 2.04
HLA-C-209ENST00000495835 RIC8AQ9NPQ8 531 aa27.8■■■□□ 2.04
HLA-C-209ENST00000495835 FAM217BQ9NTX9 383 aaPredicted RBP27.8■■■□□ 2.04
HLA-C-209ENST00000495835 PPP4R2Q9NY27 417 aa27.8■■■□□ 2.04
HLA-C-209ENST00000495835 PCDHA6Q9UN73 950 aa27.8■■■□□ 2.04
HLA-C-209ENST00000495835 PCDHA8Q9Y5H6 950 aa27.8■■■□□ 2.04
HLA-C-209ENST00000495835 V9GY48 417 aaPredicted RBP27.8■■■□□ 2.04
HLA-C-209ENST00000495835 NID2Q14112 1375 aa27.79■■■□□ 2.04
HLA-C-209ENST00000495835 H3BRB1 525 aa27.79■■■□□ 2.04
HLA-C-209ENST00000495835 METAP2P50579 478 aaKnown RBP eCLIP27.79■■■□□ 2.04
HLA-C-209ENST00000495835 WWC2Q6AWC2 1192 aa27.79■■■□□ 2.04
HLA-C-209ENST00000495835 CYFIP1Q7L576 1253 aa27.79■■■□□ 2.04
HLA-C-209ENST00000495835 PPP1R13LQ8WUF5 828 aa27.79■■■□□ 2.04
HLA-C-209ENST00000495835 TIFAQ96CG3 184 aa27.79■■■□□ 2.04
HLA-C-209ENST00000495835 CDX2Q99626 313 aaPredicted RBP27.79■■■□□ 2.04
HLA-C-209ENST00000495835 TUT1Q9H6E5 874 aaKnown RBP27.79■■■□□ 2.04
HLA-C-209ENST00000495835 BARHL2Q9NY43 387 aa27.79■■■□□ 2.04
HLA-C-209ENST00000495835 CXXC1Q9P0U4 656 aaPredicted RBP27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms