RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 KIAA1211LQ6NV74 962 aa8.63□□□□□ -1.03
VIM-207ENST00000495528 VHLLQ6RSH7 139 aa8.63□□□□□ -1.03
VIM-207ENST00000495528 SPRED2Q7Z698 418 aa8.63□□□□□ -1.03
VIM-207ENST00000495528 VSIG10LQ86VR7 867 aa8.63□□□□□ -1.03
VIM-207ENST00000495528 SREK1Q8WXA9 508 aaKnown RBP8.63□□□□□ -1.03
VIM-207ENST00000495528 MISP3Q96FF7 219 aa8.63□□□□□ -1.03
VIM-207ENST00000495528 ZFP64Q9NPA5 681 aa8.63□□□□□ -1.03
VIM-207ENST00000495528 ST7Q9NRC1 585 aa8.63□□□□□ -1.03
VIM-207ENST00000495528 GPATCH2Q9NW75 528 aa8.63□□□□□ -1.03
VIM-207ENST00000495528 MINPP1Q9UNW1 487 aa8.63□□□□□ -1.03
VIM-207ENST00000495528 C10orf71Q711Q0 1435 aa8.63□□□□□ -1.03
VIM-207ENST00000495528 MEIS1O00470 390 aa8.62□□□□□ -1.03
VIM-207ENST00000495528 WNT11O96014 354 aa8.62□□□□□ -1.03
VIM-207ENST00000495528 PRNPP04156 253 aa8.62□□□□□ -1.03
VIM-207ENST00000495528 CD8BP10966 210 aa8.62□□□□□ -1.03
VIM-207ENST00000495528 TPP2P29144 1249 aaPredicted RBP8.62□□□□□ -1.03
VIM-207ENST00000495528 MTHFSP49914 203 aa8.62□□□□□ -1.03
VIM-207ENST00000495528 NMIQ13287 307 aaPredicted RBP8.62□□□□□ -1.03
VIM-207ENST00000495528 BBS9Q3SYG4 887 aa8.62□□□□□ -1.03
VIM-207ENST00000495528 ZNF530Q6P9A1 599 aaPredicted RBP8.62□□□□□ -1.03
VIM-207ENST00000495528 STK11IPQ8N1F8 1099 aa8.62□□□□□ -1.03
VIM-207ENST00000495528 ASB11Q8WXH4 323 aa8.62□□□□□ -1.03
VIM-207ENST00000495528 TRIT1Q9H3H1 467 aaKnown RBP8.62□□□□□ -1.03
VIM-207ENST00000495528 GFOD1Q9NXC2 390 aa8.62□□□□□ -1.03
VIM-207ENST00000495528 SRP68Q9UHB9 627 aaKnown RBP8.62□□□□□ -1.03
VIM-207ENST00000495528 PCDHB12Q9Y5F1 795 aa8.62□□□□□ -1.03
VIM-207ENST00000495528 CICQ96RK0 1608 aaPredicted RBP8.62□□□□□ -1.03
VIM-207ENST00000495528 B2RBV5 119 aa8.61□□□□□ -1.03
VIM-207ENST00000495528 DDAH1O94760 285 aa8.61□□□□□ -1.03
VIM-207ENST00000495528 CRKLP46109 303 aaKnown RBP8.61□□□□□ -1.03
VIM-207ENST00000495528 DDR1Q08345 913 aa8.61□□□□□ -1.03
VIM-207ENST00000495528 AMOTQ4VCS5 1084 aa8.61□□□□□ -1.03
VIM-207ENST00000495528 C6orf15Q6UXA7 325 aaPredicted RBP8.61□□□□□ -1.03
VIM-207ENST00000495528 TP53INP2Q8IXH6 220 aa8.61□□□□□ -1.03
VIM-207ENST00000495528 C7orf61Q8IZ16 206 aa8.61□□□□□ -1.03
VIM-207ENST00000495528 MICAL1Q8TDZ2 1067 aa8.61□□□□□ -1.03
VIM-207ENST00000495528 KLHL6Q8WZ60 621 aa8.61□□□□□ -1.03
VIM-207ENST00000495528 GPR62Q9BZJ7 368 aa8.61□□□□□ -1.03
VIM-207ENST00000495528 PANK3Q9H999 370 aa8.61□□□□□ -1.03
VIM-207ENST00000495528 KDM6AO15550 1401 aaPredicted RBP8.61□□□□□ -1.03
VIM-207ENST00000495528 PLEKHG2Q9H7P9 1386 aa8.61□□□□□ -1.03
VIM-207ENST00000495528 CHRNA5P30532 468 aa8.6□□□□□ -1.03
VIM-207ENST00000495528 HTRA3P83110 453 aa8.6□□□□□ -1.03
VIM-207ENST00000495528 NFXL1Q6ZNB6 911 aa8.6□□□□□ -1.03
VIM-207ENST00000495528 CREG2Q8IUH2 290 aa8.6□□□□□ -1.03
VIM-207ENST00000495528 CKAP2LQ8IYA6 745 aa8.6□□□□□ -1.03
VIM-207ENST00000495528 CELF2-AS1Q8N7Q2 184 aa8.6□□□□□ -1.03
VIM-207ENST00000495528 TRIM55Q9BYV6 548 aa8.6□□□□□ -1.03
VIM-207ENST00000495528 ZNF451Q9Y4E5 1061 aa8.6□□□□□ -1.03
VIM-207ENST00000495528 USP42Q9H9J4 1324 aaKnown RBP8.59□□□□□ -1.03
VIM-207ENST00000495528 N4BP2Q86UW6 1770 aaPredicted RBP8.59□□□□□ -1.03
VIM-207ENST00000495528 SHOXO15266 292 aa8.59□□□□□ -1.03
VIM-207ENST00000495528 PRAMEF1O95521 474 aa8.59□□□□□ -1.03
VIM-207ENST00000495528 SRFP11831 508 aa8.59□□□□□ -1.03
VIM-207ENST00000495528 TM4SF1P30408 202 aa8.59□□□□□ -1.03
VIM-207ENST00000495528 FXNQ16595 210 aa8.59□□□□□ -1.03
VIM-207ENST00000495528 DALRD3Q5D0E6 543 aaKnown RBP8.59□□□□□ -1.03
VIM-207ENST00000495528 C1orf141Q5JVX7 400 aa8.59□□□□□ -1.03
VIM-207ENST00000495528 NOL9Q5SY16 702 aaKnown RBP8.59□□□□□ -1.03
VIM-207ENST00000495528 HEATR6Q6AI08 1181 aaKnown RBP8.59□□□□□ -1.03
VIM-207ENST00000495528 SULT6B1Q6IMI4 303 aa8.59□□□□□ -1.03
VIM-207ENST00000495528 THAP5Q7Z6K1 395 aa8.59□□□□□ -1.03
VIM-207ENST00000495528 ADAT2Q7Z6V5 191 aaKnown RBP8.59□□□□□ -1.03
VIM-207ENST00000495528 WFDC3Q8IUB2 231 aa8.59□□□□□ -1.03
VIM-207ENST00000495528 FAM178BQ8IXR5 827 aa8.59□□□□□ -1.03
VIM-207ENST00000495528 BRF1Q92994 677 aa8.59□□□□□ -1.03
VIM-207ENST00000495528 FGD4Q96M96 766 aa8.59□□□□□ -1.03
VIM-207ENST00000495528 HAUS7Q99871 368 aa8.59□□□□□ -1.03
VIM-207ENST00000495528 DUSP13Q9UII6 198 aa8.59□□□□□ -1.03
VIM-207ENST00000495528 KIAA1551Q9HCM1 1747 aa8.59□□□□□ -1.03
VIM-207ENST00000495528 ANKRD26Q9UPS8 1709 aa8.59□□□□□ -1.03
VIM-207ENST00000495528 POLRMTO00411 1230 aaKnown RBP8.58□□□□□ -1.04
VIM-207ENST00000495528 KLF4O43474 513 aa8.58□□□□□ -1.04
VIM-207ENST00000495528 EPHX1P07099 455 aa8.58□□□□□ -1.04
VIM-207ENST00000495528 MORC1Q86VD1 984 aa8.58□□□□□ -1.04
VIM-207ENST00000495528 TSPYL5Q86VY4 417 aaPredicted RBP8.58□□□□□ -1.04
VIM-207ENST00000495528 DNAJC10Q8IXB1 793 aa8.58□□□□□ -1.04
VIM-207ENST00000495528 C16orf71Q8IYS4 520 aaPredicted RBP8.58□□□□□ -1.04
VIM-207ENST00000495528 DNAJC2Q99543 621 aaKnown RBP8.58□□□□□ -1.04
VIM-207ENST00000495528 DSCC1Q9BVC3 393 aa8.58□□□□□ -1.04
VIM-207ENST00000495528 CARS2Q9HA77 564 aaKnown RBP8.58□□□□□ -1.04
VIM-207ENST00000495528 GP6Q9HCN6 339 aa8.58□□□□□ -1.04
VIM-207ENST00000495528 PAK6Q9NQU5 681 aaPredicted RBP8.58□□□□□ -1.04
VIM-207ENST00000495528 PRDM7Q9NQW5 492 aa8.58□□□□□ -1.04
VIM-207ENST00000495528 RNF181Q9P0P0 153 aa8.58□□□□□ -1.04
VIM-207ENST00000495528 KIF13BQ9NQT8 1826 aa8.58□□□□□ -1.04
VIM-207ENST00000495528 C4AP0C0L4 1744 aa8.57□□□□□ -1.04
VIM-207ENST00000495528 CBFA2T2O43439 604 aa8.57□□□□□ -1.04
VIM-207ENST00000495528 SIGLEC6O43699 453 aa8.57□□□□□ -1.04
VIM-207ENST00000495528 HSPA5P11021 654 aaKnown RBP8.57□□□□□ -1.04
VIM-207ENST00000495528 CD247P20963 164 aa8.57□□□□□ -1.04
VIM-207ENST00000495528 IL13P35225 146 aa8.57□□□□□ -1.04
VIM-207ENST00000495528 ZP2Q05996 745 aa8.57□□□□□ -1.04
VIM-207ENST00000495528 SLC39A6Q13433 755 aa8.57□□□□□ -1.04
VIM-207ENST00000495528 TCEAL1Q15170 157 aa8.57□□□□□ -1.04
VIM-207ENST00000495528 ANGEL2Q5VTE6 544 aaKnown RBP8.57□□□□□ -1.04
VIM-207ENST00000495528 Q8N3U1 123 aa8.57□□□□□ -1.04
VIM-207ENST00000495528 ADCY4Q8NFM4 1077 aa8.57□□□□□ -1.04
VIM-207ENST00000495528 DRC1Q96MC2 740 aa8.57□□□□□ -1.04
VIM-207ENST00000495528 HDAC8Q9BY41 377 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms