RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 HTTP42858 3142 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 CYP3A7-CYP3A51PA0A087WV96 503 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 BIN1O00499 593 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 VWA5AO00534 786 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 CBFA2T2O43439 604 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 CYP3A7P24462 503 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 MSNP26038 577 aaKnown RBP11.53□□□□□ -0.56
HDAC3-214ENST00000495485 ZNF76P36508 570 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 TXKP42681 527 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 SARSP49591 514 aaKnown RBP11.53□□□□□ -0.56
HDAC3-214ENST00000495485 IQCB1Q15051 598 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 UBE2SQ16763 222 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 SARM1Q6SZW1 724 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 TRMT44Q8IYL2 757 aaKnown RBP11.53□□□□□ -0.56
HDAC3-214ENST00000495485 ABRAQ8N0Z2 381 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 KCTD17Q8N5Z5 321 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 ANKRD13CQ8N6S4 541 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 ERMNQ8TAM6 284 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 SOCS4Q8WXH5 440 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 PAGE5Q96GU1 130 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 TEX13BQ9BXU2 312 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 EFCC1Q9HA90 598 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 SLC38A10Q9HBR0 1119 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 RBPJLQ9UBG7 517 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 PCDHA12Q9UN75 941 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 KDM3AQ9Y4C1 1321 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 ZNF236Q9UL36 1845 aa11.53□□□□□ -0.56
HDAC3-214ENST00000495485 CENPFP49454 3210 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 WNT7AO00755 349 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 MEIS2O14770 477 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 ICAM1P05362 532 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 CYP3A4P08684 503 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 CAPN2P17655 700 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 ERCC5P28715 1186 aaPredicted RBP11.52□□□□□ -0.57
HDAC3-214ENST00000495485 CDC25BP30305 580 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 TECP42680 631 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 AFMP43652 599 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 ARHGAP4P98171 946 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 MYL5Q02045 173 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 STIM1Q13586 685 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 KIAA1755Q5JYT7 1200 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 C11orf57Q6ZUT1 292 aaPredicted RBP11.52□□□□□ -0.57
HDAC3-214ENST00000495485 SH3RF1Q7Z6J0 888 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 RIOX2Q8IUF8 465 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 DRC7Q8IY82 874 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 AOPEPQ8N6M6 819 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 IGSF22Q8N9C0 903 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 SPATA20Q8TB22 786 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 FAM20AQ96MK3 541 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 MTMR9Q96QG7 549 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 SPATC1LQ9H0A9 340 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 TMEM60Q9H2L4 133 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 SLC5A4Q9NY91 659 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 CPA4Q9UI42 421 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 IVNS1ABPQ9Y6Y0 642 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 MYH7BA7E2Y1 1941 aa11.52□□□□□ -0.57
HDAC3-214ENST00000495485 TNPO2O14787 897 aaKnown RBP11.51□□□□□ -0.57
HDAC3-214ENST00000495485 SREBF1P36956 1147 aa11.51□□□□□ -0.57
HDAC3-214ENST00000495485 STAT3P40763 770 aa11.51□□□□□ -0.57
HDAC3-214ENST00000495485 PSMC4P43686 418 aa11.51□□□□□ -0.57
HDAC3-214ENST00000495485 DPYDQ12882 1025 aa11.51□□□□□ -0.57
HDAC3-214ENST00000495485 IRF5Q13568 498 aa11.51□□□□□ -0.57
HDAC3-214ENST00000495485 MORC3Q14149 939 aa11.51□□□□□ -0.57
HDAC3-214ENST00000495485 Q4G0T1 1027 aa11.51□□□□□ -0.57
HDAC3-214ENST00000495485 HAUS3Q68CZ6 603 aa11.51□□□□□ -0.57
HDAC3-214ENST00000495485 CCDC174Q6PII3 467 aa11.51□□□□□ -0.57
HDAC3-214ENST00000495485 USP17L6PQ6QN14 398 aa11.51□□□□□ -0.57
HDAC3-214ENST00000495485 USP49Q70CQ1 688 aa11.51□□□□□ -0.57
HDAC3-214ENST00000495485 SV2BQ7L1I2 683 aa11.51□□□□□ -0.57
HDAC3-214ENST00000495485 POTEDQ86YR6 584 aa11.51□□□□□ -0.57
HDAC3-214ENST00000495485 CHST13Q8NET6 341 aa11.51□□□□□ -0.57
HDAC3-214ENST00000495485 TTC12Q9H892 705 aaPredicted RBP11.51□□□□□ -0.57
HDAC3-214ENST00000495485 MAN1B1Q9UKM7 699 aa11.51□□□□□ -0.57
HDAC3-214ENST00000495485 CCPG1Q9ULG6 757 aa11.51□□□□□ -0.57
HDAC3-214ENST00000495485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.5□□□□□ -0.57
HDAC3-214ENST00000495485 ADAMTS3O15072 1205 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 NRDCO43847 1150 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 CFBP00751 764 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 XRCC5P13010 732 aaKnown RBP11.5□□□□□ -0.57
HDAC3-214ENST00000495485 CIITAP33076 1130 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 DGKZQ13574 1117 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 KCNB1Q14721 858 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 KARSQ15046 597 aaKnown RBP11.5□□□□□ -0.57
HDAC3-214ENST00000495485 E2F4Q16254 413 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 IL17AQ16552 155 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 DPCR1Q3MIW9 517 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 FBXO46Q6PJ61 603 aaPredicted RBP11.5□□□□□ -0.57
HDAC3-214ENST00000495485 REPS2Q8NFH8 660 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 ENOX1Q8TC92 643 aaKnown RBP11.5□□□□□ -0.57
HDAC3-214ENST00000495485 ATG4CQ96DT6 458 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 MRFAP1L1Q96HT8 127 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 MBOAT7Q96N66 472 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 PAGR1Q9BTK6 254 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 R3HDMLQ9H3Y0 253 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 BMP2KQ9NSY1 1161 aaPredicted RBP11.5□□□□□ -0.57
HDAC3-214ENST00000495485 SRRDQ9UH36 339 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 ZNF214Q9UL59 606 aaPredicted RBP11.5□□□□□ -0.57
HDAC3-214ENST00000495485 PLXNB2O15031 1838 aa11.5□□□□□ -0.57
HDAC3-214ENST00000495485 LOC102724159A0A0B4J2E5 919 aa11.49□□□□□ -0.57
HDAC3-214ENST00000495485 SLC15A5A6NIM6 579 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms