RNA–Protein interactions for RNA: ENST00000494872.5

TRIM2-209, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 2,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-209ENST00000494872 INPP5BP32019 993 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 CXCR5P32302 372 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 USP8P40818 1118 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 TECP42680 631 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 NAPAP54920 295 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 PSMD2Q13200 908 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 SKIDA1Q1XH10 827 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 CACNA2D4Q7Z3S7 1137 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 PROM2Q8N271 834 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 SLC44A5Q8NCS7 719 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.13□□□□□ -0.31
TRIM2-209ENST00000494872 MTMR8Q96EF0 704 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 CEP89Q96ST8 783 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 PAGR1Q9BTK6 254 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 RTFDC1Q9BY42 306 aaPredicted RBP13.13□□□□□ -0.31
TRIM2-209ENST00000494872 SALL4Q9UJQ4 1053 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 MTMR7Q9Y216 660 aa13.13□□□□□ -0.31
TRIM2-209ENST00000494872 NKRFO15226 690 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRIM2-209ENST00000494872 SMARCA1P28370 1054 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 SLC9C1Q4G0N8 1177 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 CFAP58Q5T655 872 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 C16orf86Q6ZW13 317 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 NEDD1Q8NHV4 660 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 TSG101Q99816 390 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 HINFPQ9BQA5 517 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 EHD4Q9H223 541 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 MYH10P35580 1976 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 SMCO2A6NFE2 343 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 SRRM3A6NNA2 597 aaPredicted RBP13.12□□□□□ -0.31
TRIM2-209ENST00000494872 NDUFAB1O14561 156 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 NCK2O43639 380 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 GOLGA8HP0CJ92 632 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 RFC4P35249 363 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 BTDP43251 543 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 CDK8P49336 464 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 LIG3P49916 1009 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
TRIM2-209ENST00000494872 RASSF7Q02833 373 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 GRB10Q13322 594 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 HGSNATQ68CP4 663 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 MCTP2Q6DN12 878 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 LRRC55Q6ZSA7 311 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 MICALCLQ6ZW33 695 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 EIF1ADQ8N9N8 165 aaKnown RBP13.12□□□□□ -0.31
TRIM2-209ENST00000494872 WHAMMQ8TF30 809 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 LARP4BQ92615 738 aaKnown RBP13.12□□□□□ -0.31
TRIM2-209ENST00000494872 EYA3Q99504 573 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 BLOC1S4Q9NUP1 217 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 CEP72Q9P209 647 aa13.12□□□□□ -0.31
TRIM2-209ENST00000494872 TNRC6CQ9HCJ0 1690 aaKnown RBP13.12□□□□□ -0.31
TRIM2-209ENST00000494872 GPR75-ASB3A0A0A6YYF3 556 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 MYMKA6NI61 221 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 SERPING1P05155 500 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 SLC1A4P43007 532 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 GFPT1Q06210 699 aaPredicted RBP13.11□□□□□ -0.31
TRIM2-209ENST00000494872 NFIXQ14938 502 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 TRAPPC3LQ5T215 181 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 SOGA3Q5TF21 947 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 PLCD3Q8N3E9 789 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 PSMB7Q99436 277 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 SMARCAL1Q9NZC9 954 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 NAV1Q8NEY1 1877 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 SBF2Q86WG5 1849 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 ESYT2A0FGR8 921 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 HEXIM1O94992 359 aaKnown RBP13.11□□□□□ -0.31
TRIM2-209ENST00000494872 GLI1P08151 1106 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 PLCG2P16885 1265 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 NAP1L1P55209 391 aaKnown RBP13.11□□□□□ -0.31
TRIM2-209ENST00000494872 PDCLQ13371 301 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 NAB2Q15742 525 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 TMEM266Q2M3C6 531 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 SFMBT2Q5VUG0 894 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 YTHDF3Q7Z739 585 aaKnown RBP13.11□□□□□ -0.31
TRIM2-209ENST00000494872 AMIGO3Q86WK7 504 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 TEX11Q8IYF3 940 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 KAT2BQ92831 832 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 HPS3Q969F9 1004 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 CDK5RAP3Q96JB5 506 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 CCDC43Q96MW1 224 aaKnown RBP13.11□□□□□ -0.31
TRIM2-209ENST00000494872 MTMR9Q96QG7 549 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 RAB34Q9BZG1 259 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 CD209Q9NNX6 404 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 EHD2Q9NZN4 543 aa13.11□□□□□ -0.31
TRIM2-209ENST00000494872 hCG_1984214I3L0E3 225 aa13.1□□□□□ -0.31
TRIM2-209ENST00000494872 CES2O00748 559 aa13.1□□□□□ -0.31
TRIM2-209ENST00000494872 BUB1O43683 1085 aa13.1□□□□□ -0.31
TRIM2-209ENST00000494872 KIAA0754O94854 1291 aa13.1□□□□□ -0.31
TRIM2-209ENST00000494872 ATP2B4P23634 1241 aa13.1□□□□□ -0.31
TRIM2-209ENST00000494872 CARSP49589 748 aaKnown RBP13.1□□□□□ -0.31
TRIM2-209ENST00000494872 IRX3P78415 501 aaPredicted RBP13.1□□□□□ -0.31
TRIM2-209ENST00000494872 GPSM2P81274 684 aa13.1□□□□□ -0.31
TRIM2-209ENST00000494872 EHHADHQ08426 723 aa13.1□□□□□ -0.31
TRIM2-209ENST00000494872 TDRD12Q587J7 1177 aaKnown RBP13.1□□□□□ -0.31
TRIM2-209ENST00000494872 CNPY4Q8N129 248 aa13.1□□□□□ -0.31
TRIM2-209ENST00000494872 ZNF713Q8N859 430 aaPredicted RBP13.1□□□□□ -0.31
TRIM2-209ENST00000494872 CNBD1Q8NA66 436 aa13.1□□□□□ -0.31
TRIM2-209ENST00000494872 TBCKQ8TEA7 893 aa13.1□□□□□ -0.31
TRIM2-209ENST00000494872 NGLY1Q96IV0 654 aa13.1□□□□□ -0.31
TRIM2-209ENST00000494872 PNMA5Q96PV4 448 aa13.1□□□□□ -0.31
TRIM2-209ENST00000494872 EPN3Q9H201 632 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms