RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 SIK3Q9Y2K2 1263 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 LRRC37AA6NMS7 1700 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 ADAMTSL1Q8N6G6 1762 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 GOLGB1Q14789 3259 aaKnown RBP12.44□□□□□ -0.42
CHMP3-209ENST00000494623 POTEB3A0JP26 581 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 POTECB2RU33 542 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 POTEB2H3BUK9 544 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 APBA3O96018 575 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 PLA2G4BP0C869 781 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 EHHADHQ08426 723 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 SMC1AQ14683 1233 aaKnown RBP12.44□□□□□ -0.42
CHMP3-209ENST00000494623 USH1GQ495M9 461 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 POTEBQ6S5H4 581 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 LRRC55Q6ZSA7 311 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 RRAGAQ7L523 313 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 TRAPPC11Q7Z392 1133 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 CAPZA3Q96KX2 299 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 FGFBP2Q9BYJ0 223 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 NT5C3AQ9H0P0 336 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 ZHX3Q9H4I2 956 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 NYAP2Q9P242 653 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 SAR1BQ9Y6B6 198 aa12.44□□□□□ -0.42
CHMP3-209ENST00000494623 F5H6K3 240 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 ECE2O60344 883 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 TUBB4BP68371 445 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 ICA1Q05084 483 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 KLRC3Q07444 240 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 KIF5AQ12840 1032 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 HERC4Q5GLZ8 1057 aaPredicted RBP12.43□□□□□ -0.42
CHMP3-209ENST00000494623 FAM26FQ5R3K3 315 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 CCDC84Q86UT8 332 aaPredicted RBP12.43□□□□□ -0.42
CHMP3-209ENST00000494623 MSANTD4Q8NCY6 345 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 DCAF4Q8WV16 495 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 AKT1S1Q96B36 256 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 DEF6Q9H4E7 631 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 ANKRD31Q8N7Z5 1873 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 ZNF263O14978 683 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 KRT18P05783 430 aaKnown RBP12.43□□□□□ -0.42
CHMP3-209ENST00000494623 TAL1P17542 331 aaPredicted RBP12.43□□□□□ -0.42
CHMP3-209ENST00000494623 USP11P51784 963 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 CCDC40Q4G0X9 1142 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 PRR16Q569H4 304 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 DACT2Q5SW24 774 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 STRIP1Q5VSL9 837 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 GPBP1Q86WP2 473 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 SMCR8Q8TEV9 937 aaPredicted RBP12.43□□□□□ -0.42
CHMP3-209ENST00000494623 NAP1L4Q99733 375 aaKnown RBP12.43□□□□□ -0.42
CHMP3-209ENST00000494623 GLT8D2Q9H1C3 349 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 TDRD3Q9H7E2 651 aaKnown RBP12.43□□□□□ -0.42
CHMP3-209ENST00000494623 ABCB6Q9NP58 842 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 RNF216Q9NWF9 866 aaPredicted RBP12.43□□□□□ -0.42
CHMP3-209ENST00000494623 ARHGAP20Q9P2F6 1191 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 RAB21Q9UL25 225 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 PLAGL2Q9UPG8 496 aa12.43□□□□□ -0.42
CHMP3-209ENST00000494623 LRRC53A6NM62 1247 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 MEIS2O14770 477 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 MED24O75448 989 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 OAS2P29728 719 aaKnown RBP12.42□□□□□ -0.42
CHMP3-209ENST00000494623 EIF4A3P38919 411 aaKnown RBP12.42□□□□□ -0.42
CHMP3-209ENST00000494623 VSNL1P62760 191 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 CDK17Q00537 523 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 FKBP3Q00688 224 aaKnown RBP12.42□□□□□ -0.42
CHMP3-209ENST00000494623 ABCB5Q2M3G0 1257 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 BEND6Q5SZJ8 279 aaPredicted RBP12.42□□□□□ -0.42
CHMP3-209ENST00000494623 CCDC65Q8IXS2 484 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 EHBP1Q8NDI1 1231 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 MMS19Q96T76 1030 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 KDM3AQ9Y4C1 1321 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 VAV2P52735 878 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 ZNF662Q6ZS27 426 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 CACNA2D4Q7Z3S7 1137 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 NEK11Q8NG66 645 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 P2RX7Q99572 595 aaKnown RBP12.42□□□□□ -0.42
CHMP3-209ENST00000494623 IDI2Q9BXS1 227 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 SUGCTQ9HAC7 445 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 PCDHA13Q9Y5I0 950 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 COL4A3BPQ9Y5P4 624 aa12.42□□□□□ -0.42
CHMP3-209ENST00000494623 MEIS1O00470 390 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 AKR1B10O60218 316 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 ERLIN1O75477 346 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 KIF20AO95235 890 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 ARHGAP4P98171 946 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 HYIQ5T013 277 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 PAPD7Q5XG87 772 aaKnown RBP12.41□□□□□ -0.42
CHMP3-209ENST00000494623 TATDN1Q6P1N9 297 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 HNRNPLLQ8WVV9 542 aaKnown RBP12.41□□□□□ -0.42
CHMP3-209ENST00000494623 SECISBP2LQ93073 1101 aaKnown RBP12.41□□□□□ -0.42
CHMP3-209ENST00000494623 IQCDQ96DY2 449 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 MRIQ9BWK5 157 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 AMNQ9BXJ7 453 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 KCNMB3Q9NPA1 279 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 JADE2Q9NQC1 790 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 MYH7BA7E2Y1 1941 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 MYH4Q9Y623 1939 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 POTEFA5A3E0 1075 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 H0YIN7 160 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 ZNF185O15231 689 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 POTEIP0CG38 1075 aa12.41□□□□□ -0.42
CHMP3-209ENST00000494623 HNRNPH3P31942 346 aaKnown RBP12.41□□□□□ -0.42
CHMP3-209ENST00000494623 KIF11P52732 1056 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms