RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 OTOFQ9HC10 1997 aa9.79□□□□□ -0.84
RIF1-211ENST00000494333 FLT1P17948 1338 aa9.79□□□□□ -0.84
RIF1-211ENST00000494333 A0A0G2JLL6 359 aaPredicted RBP9.78□□□□□ -0.84
RIF1-211ENST00000494333 GNB5O14775 395 aa9.78□□□□□ -0.84
RIF1-211ENST00000494333 CYP2C8P10632 490 aa9.78□□□□□ -0.84
RIF1-211ENST00000494333 CAP2P40123 477 aa9.78□□□□□ -0.84
RIF1-211ENST00000494333 MFAP1P55081 439 aaKnown RBP9.78□□□□□ -0.84
RIF1-211ENST00000494333 LACTBP83111 547 aaPredicted RBP9.78□□□□□ -0.84
RIF1-211ENST00000494333 RRP1BQ14684 758 aaKnown RBP9.78□□□□□ -0.84
RIF1-211ENST00000494333 SLC4A8Q2Y0W8 1093 aa9.78□□□□□ -0.84
RIF1-211ENST00000494333 C17orf99Q6UX52 265 aa9.78□□□□□ -0.84
RIF1-211ENST00000494333 GADL1Q6ZQY3 521 aa9.78□□□□□ -0.84
RIF1-211ENST00000494333 PRRT2Q7Z6L0 340 aaPredicted RBP9.78□□□□□ -0.84
RIF1-211ENST00000494333 CRACR2BQ8N4Y2 399 aaPredicted RBP9.78□□□□□ -0.84
RIF1-211ENST00000494333 HHIPQ96QV1 700 aa9.78□□□□□ -0.84
RIF1-211ENST00000494333 DNAJC2Q99543 621 aaKnown RBP9.78□□□□□ -0.84
RIF1-211ENST00000494333 SAP30BPQ9UHR5 308 aaKnown RBP9.78□□□□□ -0.84
RIF1-211ENST00000494333 A0A1W2PP55 124 aa9.77□□□□□ -0.85
RIF1-211ENST00000494333 GOLIM4O00461 696 aa9.77□□□□□ -0.85
RIF1-211ENST00000494333 HLA-DOAP06340 250 aa9.77□□□□□ -0.85
RIF1-211ENST00000494333 IRS1P35568 1242 aa9.77□□□□□ -0.85
RIF1-211ENST00000494333 SPP2Q13103 211 aa9.77□□□□□ -0.85
RIF1-211ENST00000494333 SLC9C2Q5TAH2 1124 aa9.77□□□□□ -0.85
RIF1-211ENST00000494333 ADAMTSL4Q6UY14 1074 aa9.77□□□□□ -0.85
RIF1-211ENST00000494333 CERS3Q8IU89 383 aa9.77□□□□□ -0.85
RIF1-211ENST00000494333 EPS8L3Q8TE67 593 aaKnown RBP9.77□□□□□ -0.85
RIF1-211ENST00000494333 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.77□□□□□ -0.85
RIF1-211ENST00000494333 PARK7Q99497 189 aaKnown RBP9.77□□□□□ -0.85
RIF1-211ENST00000494333 POP1Q99575 1024 aaKnown RBP9.77□□□□□ -0.85
RIF1-211ENST00000494333 LRRCC1Q9C099 1032 aa9.77□□□□□ -0.85
RIF1-211ENST00000494333 ARHGAP39Q9C0H5 1083 aa9.77□□□□□ -0.85
RIF1-211ENST00000494333 BOLA2Q9H3K6 86 aa9.77□□□□□ -0.85
RIF1-211ENST00000494333 AK9Q5TCS8 1911 aa9.77□□□□□ -0.85
RIF1-211ENST00000494333 PDE2AO00408 941 aaPredicted RBP9.76□□□□□ -0.85
RIF1-211ENST00000494333 SMARCA5O60264 1052 aaPredicted RBP9.76□□□□□ -0.85
RIF1-211ENST00000494333 ATP5JP18859 108 aa9.76□□□□□ -0.85
RIF1-211ENST00000494333 PSMC4P43686 418 aa9.76□□□□□ -0.85
RIF1-211ENST00000494333 COL19A1Q14993 1142 aa9.76□□□□□ -0.85
RIF1-211ENST00000494333 TMED8Q6PL24 325 aaPredicted RBP9.76□□□□□ -0.85
RIF1-211ENST00000494333 TMEM102Q8N9M5 508 aaPredicted RBP9.76□□□□□ -0.85
RIF1-211ENST00000494333 NXPE3Q969Y0 559 aa9.76□□□□□ -0.85
RIF1-211ENST00000494333 EDC3Q96F86 508 aaKnown RBP9.76□□□□□ -0.85
RIF1-211ENST00000494333 YTHDC1Q96MU7 727 aaKnown RBP9.76□□□□□ -0.85
RIF1-211ENST00000494333 PLVAPQ9BX97 442 aa9.76□□□□□ -0.85
RIF1-211ENST00000494333 LACRTQ9GZZ8 138 aa9.76□□□□□ -0.85
RIF1-211ENST00000494333 SUV39H2Q9H5I1 410 aa9.76□□□□□ -0.85
RIF1-211ENST00000494333 PTCH2Q9Y6C5 1203 aa9.76□□□□□ -0.85
RIF1-211ENST00000494333 COL2A1P02458 1487 aaPredicted RBP9.76□□□□□ -0.85
RIF1-211ENST00000494333 ZNF532Q9HCE3 1301 aa9.76□□□□□ -0.85
RIF1-211ENST00000494333 PIK3R2O00459 728 aa9.75□□□□□ -0.85
RIF1-211ENST00000494333 GDF11O95390 407 aa9.75□□□□□ -0.85
RIF1-211ENST00000494333 ASNSP08243 561 aa9.75□□□□□ -0.85
RIF1-211ENST00000494333 PDE6AP16499 860 aa9.75□□□□□ -0.85
RIF1-211ENST00000494333 ERCC3P19447 782 aa9.75□□□□□ -0.85
RIF1-211ENST00000494333 CTGFP29279 349 aa9.75□□□□□ -0.85
RIF1-211ENST00000494333 JAG1P78504 1218 aa9.75□□□□□ -0.85
RIF1-211ENST00000494333 NBPF11Q86T75 865 aa9.75□□□□□ -0.85
RIF1-211ENST00000494333 TTC6Q86TZ1 520 aa9.75□□□□□ -0.85
RIF1-211ENST00000494333 METTL16Q86W50 562 aaKnown RBP9.75□□□□□ -0.85
RIF1-211ENST00000494333 SMCR8Q8TEV9 937 aaPredicted RBP9.75□□□□□ -0.85
RIF1-211ENST00000494333 RIOK1Q9BRS2 568 aaKnown RBP9.75□□□□□ -0.85
RIF1-211ENST00000494333 DCTPP1Q9H773 170 aa9.75□□□□□ -0.85
RIF1-211ENST00000494333 DNAJC18Q9H819 358 aa9.75□□□□□ -0.85
RIF1-211ENST00000494333 AS3MTQ9HBK9 375 aa9.75□□□□□ -0.85
RIF1-211ENST00000494333 PAG1Q9NWQ8 432 aa9.75□□□□□ -0.85
RIF1-211ENST00000494333 AGTPBP1Q9UPW5 1226 aa9.75□□□□□ -0.85
RIF1-211ENST00000494333 SLC45A1Q9Y2W3 748 aa9.75□□□□□ -0.85
RIF1-211ENST00000494333 ADGRA2Q96PE1 1338 aa9.75□□□□□ -0.85
RIF1-211ENST00000494333 HOXD10P28358 340 aa9.74□□□□□ -0.85
RIF1-211ENST00000494333 HMGCS2P54868 508 aa9.74□□□□□ -0.85
RIF1-211ENST00000494333 SHROOM1Q2M3G4 852 aaPredicted RBP9.74□□□□□ -0.85
RIF1-211ENST00000494333 SLC9C1Q4G0N8 1177 aa9.74□□□□□ -0.85
RIF1-211ENST00000494333 TREML2Q5T2D2 321 aa9.74□□□□□ -0.85
RIF1-211ENST00000494333 WFDC8Q8IUA0 241 aa9.74□□□□□ -0.85
RIF1-211ENST00000494333 DMRTC2Q8IXT2 367 aaPredicted RBP9.74□□□□□ -0.85
RIF1-211ENST00000494333 ARMC5Q96C12 935 aa9.74□□□□□ -0.85
RIF1-211ENST00000494333 HAUS7Q99871 368 aa9.74□□□□□ -0.85
RIF1-211ENST00000494333 CRNKL1Q9BZJ0 848 aaKnown RBP9.74□□□□□ -0.85
RIF1-211ENST00000494333 SERPINB13Q9UIV8 391 aa9.74□□□□□ -0.85
RIF1-211ENST00000494333 LAMB1P07942 1786 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 TCRBV5S4A2TA0A5A2 114 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 GADD45BO75293 160 aaPredicted RBP9.73□□□□□ -0.85
RIF1-211ENST00000494333 ADD2P35612 726 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 PLCD1P51178 756 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 PRMT2P55345 433 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 FCGRTP55899 365 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 BACE1P56817 501 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 ATP2B2Q01814 1243 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 PABPC4Q13310 644 aaKnown RBP eCLIP9.73□□□□□ -0.85
RIF1-211ENST00000494333 KIAA0319Q5VV43 1072 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 ALG1LQ6GMV1 187 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 TATDN1Q6P1N9 297 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 IL22RA1Q8N6P7 574 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 ANKRD13CQ8N6S4 541 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 SH3TC2Q8TF17 1288 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 SDR42E1Q8WUS8 393 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 WDR18Q9BV38 432 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.73□□□□□ -0.851e-6■■□□□ 11.6
RIF1-211ENST00000494333 ARMT1Q9H993 441 aa9.73□□□□□ -0.85
RIF1-211ENST00000494333 LIN7BQ9HAP6 207 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms