RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ENC1O14682 589 aa21.8■■□□□ 1.08
RNF40-203ENST00000493683 CTNND1O60716 968 aaKnown RBP21.8■■□□□ 1.08
RNF40-203ENST00000493683 FGFR1OP2Q9NVK5 253 aa21.8■■□□□ 1.08
RNF40-203ENST00000493683 ORC6Q9Y5N6 252 aa21.8■■□□□ 1.08
RNF40-203ENST00000493683 SKIP12755 728 aa21.8■■□□□ 1.08
RNF40-203ENST00000493683 LRRC63Q05C16 580 aa21.8■■□□□ 1.08
RNF40-203ENST00000493683 CCDC124Q96CT7 223 aaKnown RBP21.8■■□□□ 1.08
RNF40-203ENST00000493683 DBNLQ9UJU6 430 aaKnown RBP21.8■■□□□ 1.08
RNF40-203ENST00000493683 ANGPTL2Q9UKU9 493 aa21.8■■□□□ 1.08
RNF40-203ENST00000493683 RPAP1Q9BWH6 1393 aaPredicted RBP21.8■■□□□ 1.08
RNF40-203ENST00000493683 IFNAR2P48551 515 aa21.8■■□□□ 1.08
RNF40-203ENST00000493683 ARL6IP4Q66PJ3 421 aaKnown RBP21.8■■□□□ 1.08
RNF40-203ENST00000493683 SPTLC3Q9NUV7 552 aa21.8■■□□□ 1.08
RNF40-203ENST00000493683 FAM8A1Q9UBU6 413 aa21.8■■□□□ 1.08
RNF40-203ENST00000493683 NRBP1Q9UHY1 535 aa21.8■■□□□ 1.08
RNF40-203ENST00000493683 PRPF3O43395 683 aaKnown RBP21.79■■□□□ 1.08
RNF40-203ENST00000493683 TTLL1O95922 423 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 PLTPP55058 493 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 DHX9Q08211 1270 aaKnown RBP21.79■■□□□ 1.08
RNF40-203ENST00000493683 ADCK5Q3MIX3 580 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 CDHR1Q96JP9 859 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 LCMT1Q9UIC8 334 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 NNTQ13423 1086 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 C6orf118Q5T5N4 469 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 ANKFY1Q9P2R3 1169 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 ATP8A1Q9Y2Q0 1164 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 THRAP3Q9Y2W1 955 aaKnown RBP21.79■■□□□ 1.08
RNF40-203ENST00000493683 WDR17Q8IZU2 1322 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 ZNF804BA4D1E1 1349 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 CCDC188H7C350 402 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 MT-ND3P03897 115 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 ADCY2Q08462 1091 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 PDCD7Q8N8D1 485 aaKnown RBP21.79■■□□□ 1.08
RNF40-203ENST00000493683 INPP1P49441 399 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 SPDL1Q96EA4 605 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 NHEJ1Q9H9Q4 299 aaPredicted RBP21.79■■□□□ 1.08
RNF40-203ENST00000493683 DISC1Q9NRI5 854 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 DNAJC5BQ9UF47 199 aa21.79■■□□□ 1.08
RNF40-203ENST00000493683 SPDYE16A6NNV3 312 aaPredicted RBP21.78■■□□□ 1.08
RNF40-203ENST00000493683 DTNBO60941 627 aa21.78■■□□□ 1.08
RNF40-203ENST00000493683 SEC31AO94979 1220 aaKnown RBP21.78■■□□□ 1.08
RNF40-203ENST00000493683 NDUFA10O95299 355 aa21.78■■□□□ 1.08
RNF40-203ENST00000493683 SURF1Q15526 300 aa21.78■■□□□ 1.08
RNF40-203ENST00000493683 SPDYE2Q495Y8 402 aa21.78■■□□□ 1.08
RNF40-203ENST00000493683 RAPH1Q70E73 1250 aa21.78■■□□□ 1.08
RNF40-203ENST00000493683 SCOCQ9UIL1 159 aa21.78■■□□□ 1.08
RNF40-203ENST00000493683 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.78■■□□□ 1.08
RNF40-203ENST00000493683 XDHP47989 1333 aa21.78■■□□□ 1.08
RNF40-203ENST00000493683 ESYT2A0FGR8 921 aa21.78■■□□□ 1.08
RNF40-203ENST00000493683 SLC7A3Q8WY07 619 aa21.78■■□□□ 1.08
RNF40-203ENST00000493683 GCC2Q8IWJ2 1684 aa21.78■■□□□ 1.08
RNF40-203ENST00000493683 PTPROQ16827 1216 aa21.78■■□□□ 1.08
RNF40-203ENST00000493683 ZNF577Q9BSK1 485 aa21.78■■□□□ 1.08
RNF40-203ENST00000493683 PARD6BQ9BYG5 372 aa21.78■■□□□ 1.08
RNF40-203ENST00000493683 WDR70Q9NW82 654 aa21.78■■□□□ 1.08
RNF40-203ENST00000493683 PACSIN2Q9UNF0 486 aaPredicted RBP21.78■■□□□ 1.08
RNF40-203ENST00000493683 NOC2LQ9Y3T9 749 aaKnown RBP21.78■■□□□ 1.08
RNF40-203ENST00000493683 PHEXP78562 749 aa21.78■■□□□ 1.08
RNF40-203ENST00000493683 SERPINI1Q99574 410 aa21.78■■□□□ 1.08
RNF40-203ENST00000493683 SH2B2O14492 632 aaPredicted RBP21.77■■□□□ 1.08
RNF40-203ENST00000493683 RASGRF2O14827 1237 aa21.77■■□□□ 1.08
RNF40-203ENST00000493683 ADD2P35612 726 aa21.77■■□□□ 1.08
RNF40-203ENST00000493683 TTLL7Q6ZT98 887 aa21.77■■□□□ 1.08
RNF40-203ENST00000493683 SUGCTQ9HAC7 445 aa21.77■■□□□ 1.08
RNF40-203ENST00000493683 TPX2Q9ULW0 747 aaKnown RBP21.77■■□□□ 1.08
RNF40-203ENST00000493683 CYP4A11Q02928 519 aa21.77■■□□□ 1.08
RNF40-203ENST00000493683 PLEKHF1Q96S99 279 aa21.77■■□□□ 1.08
RNF40-203ENST00000493683 SLAIN2Q9P270 581 aa21.77■■□□□ 1.08
RNF40-203ENST00000493683 KRT1P04264 644 aa21.77■■□□□ 1.08
RNF40-203ENST00000493683 USP21Q9UK80 565 aa21.77■■□□□ 1.08
RNF40-203ENST00000493683 NR1D1P20393 614 aa21.77■■□□□ 1.07
RNF40-203ENST00000493683 LIFRP42702 1097 aa21.77■■□□□ 1.07
RNF40-203ENST00000493683 PHKA1P46020 1223 aa21.77■■□□□ 1.07
RNF40-203ENST00000493683 FAM193BQ96PV7 902 aaPredicted RBP21.77■■□□□ 1.07
RNF40-203ENST00000493683 EIF2AQ9BY44 585 aaKnown RBP21.77■■□□□ 1.07
RNF40-203ENST00000493683 PCDHA13Q9Y5I0 950 aa21.77■■□□□ 1.07
RNF40-203ENST00000493683 ARL4AP40617 200 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 DEUP1Q05D60 604 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 TMED2Q15363 201 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 SARM1Q6SZW1 724 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 RPAINQ86UA6 219 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 RHOT2Q8IXI1 618 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 TTC1Q99614 292 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 ARHGEF37A1IGU5 675 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 RCN2Q14257 317 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 TCP11X2Q5H9J9 407 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 TMED8Q6PL24 325 aaPredicted RBP21.76■■□□□ 1.07
RNF40-203ENST00000493683 TLK1Q9UKI8 766 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 PLEKHG1Q9ULL1 1385 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 MAP3K7O43318 606 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 USP14P54578 494 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 DNAJC24Q6P3W2 148 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 LMNAP02545 664 aaKnown RBP21.76■■□□□ 1.07
RNF40-203ENST00000493683 ATG16L1Q676U5 607 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 CNKSR1Q969H4 720 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 SUDS3Q9H7L9 328 aaPredicted RBP21.76■■□□□ 1.07
RNF40-203ENST00000493683 KMT5AQ9NQR1 393 aa21.76■■□□□ 1.07
RNF40-203ENST00000493683 SPOUT1Q5T280 376 aaKnown RBP21.75■■□□□ 1.07
RNF40-203ENST00000493683 MIS18BP1Q6P0N0 1132 aa21.75■■□□□ 1.07
RNF40-203ENST00000493683 FMO2Q99518 471 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms