RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 IGSF5Q9NSI5 407 aa13.11□□□□□ -0.31
CLCNKA-206ENST00000491433 GTF2IRD1Q9UHL9 959 aa13.11□□□□□ -0.31
CLCNKA-206ENST00000491433 MTMR7Q9Y216 660 aa13.11□□□□□ -0.31
CLCNKA-206ENST00000491433 WDR19Q8NEZ3 1342 aa13.11□□□□□ -0.31
CLCNKA-206ENST00000491433 VPS13AQ96RL7 3174 aa13.1□□□□□ -0.31
CLCNKA-206ENST00000491433 RANBP6O60518 1105 aaKnown RBP13.1□□□□□ -0.31
CLCNKA-206ENST00000491433 TOP1P11387 765 aaKnown RBP13.1□□□□□ -0.31
CLCNKA-206ENST00000491433 NOVP48745 357 aa13.1□□□□□ -0.31
CLCNKA-206ENST00000491433 RPS6P62753 249 aaKnown RBP13.1□□□□□ -0.31
CLCNKA-206ENST00000491433 SLC30A10Q6XR72 485 aa13.1□□□□□ -0.31
CLCNKA-206ENST00000491433 EP400NLQ6ZTU2 488 aa13.1□□□□□ -0.31
CLCNKA-206ENST00000491433 FRMD5Q7Z6J6 570 aa13.1□□□□□ -0.31
CLCNKA-206ENST00000491433 RGS22Q8NE09 1264 aa13.1□□□□□ -0.31
CLCNKA-206ENST00000491433 COPS5Q92905 334 aa13.1□□□□□ -0.31
CLCNKA-206ENST00000491433 PABPC5Q96DU9 382 aaKnown RBP13.1□□□□□ -0.31
CLCNKA-206ENST00000491433 IL17RBQ9NRM6 502 aa13.1□□□□□ -0.31
CLCNKA-206ENST00000491433 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.1□□□□□ -0.31
CLCNKA-206ENST00000491433 KIAA1217Q5T5P2 1943 aa13.09□□□□□ -0.31
CLCNKA-206ENST00000491433 EP300Q09472 2414 aaPredicted RBP13.09□□□□□ -0.31
CLCNKA-206ENST00000491433 NBNO60934 754 aa13.09□□□□□ -0.31
CLCNKA-206ENST00000491433 LGR5O75473 907 aa13.09□□□□□ -0.31
CLCNKA-206ENST00000491433 ZXDAP98168 799 aa13.09□□□□□ -0.31
CLCNKA-206ENST00000491433 GPNMBQ14956 572 aa13.09□□□□□ -0.31
CLCNKA-206ENST00000491433 MICAL3Q7RTP6 2002 aa13.09□□□□□ -0.31
CLCNKA-206ENST00000491433 TMCO2Q7Z6W1 182 aaPredicted RBP13.09□□□□□ -0.31
CLCNKA-206ENST00000491433 BANK1Q8NDB2 785 aa13.09□□□□□ -0.31
CLCNKA-206ENST00000491433 AFG1LQ8WV93 481 aa13.09□□□□□ -0.31
CLCNKA-206ENST00000491433 CLEC4DQ8WXI8 215 aa13.09□□□□□ -0.31
CLCNKA-206ENST00000491433 UNC79Q9P2D8 2635 aa13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 H3BNC9 293 aa13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 ORC4O43929 436 aa13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 SLC16A2P36021 539 aa13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 HTRA4P83105 476 aaPredicted RBP13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 SIGLEC14Q08ET2 396 aa13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 STXBP2Q15833 593 aa13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 TTBK2Q6IQ55 1244 aa13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 FAM117BQ6P1L5 589 aa13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 CCDC62Q6P9F0 684 aa13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 SP7Q8TDD2 431 aaPredicted RBP13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 PPP1R13LQ8WUF5 828 aa13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 IWS1Q96ST2 819 aa13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 NSUN3Q9H649 340 aaKnown RBP13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 TCP11L1Q9NUJ3 509 aa13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 HDAC6Q9UBN7 1215 aa13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 ANAPC4Q9UJX5 808 aa13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 WDR87Q6ZQQ6 2873 aa13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 RALGAPA2Q2PPJ7 1873 aa13.08□□□□□ -0.32
CLCNKA-206ENST00000491433 SMARCA5O60264 1052 aaPredicted RBP13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 NMT2O60551 498 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 ARIH2O95376 493 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 PSEN2P49810 448 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 ARHGAP1Q07960 439 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 GPM6BQ13491 265 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 LAMC2Q13753 1193 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 SMAD2Q15796 467 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 EPC2Q52LR7 807 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 ZMYM1Q5SVZ6 1142 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 MYOCDQ8IZQ8 938 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 NSUN6Q8TEA1 469 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 DHX38Q92620 1227 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 KAT2BQ92831 832 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 EMID1Q96A84 441 aaPredicted RBP13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 TTC14Q96N46 770 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 CTAGE1Q96RT6 745 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 C17orf80Q9BSJ5 609 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 GPCPD1Q9NPB8 672 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 SH2B1Q9NRF2 756 aaPredicted RBP13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 NLRC5Q86WI3 1866 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 DMDP11532 3685 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 TTC41PQ6P2S7 1318 aa13.07□□□□□ -0.32
CLCNKA-206ENST00000491433 CTDSPL2Q05D32 466 aa13.06□□□□□ -0.32
CLCNKA-206ENST00000491433 MFSD10Q14728 455 aa13.06□□□□□ -0.32
CLCNKA-206ENST00000491433 LY6KQ17RY6 165 aa13.06□□□□□ -0.32
CLCNKA-206ENST00000491433 KIAA0753Q2KHM9 967 aa13.06□□□□□ -0.32
CLCNKA-206ENST00000491433 GPATCH4Q5T3I0 446 aaKnown RBP13.06□□□□□ -0.32
CLCNKA-206ENST00000491433 ZNF618Q5T7W0 954 aa13.06□□□□□ -0.32
CLCNKA-206ENST00000491433 SEPT14Q6ZU15 432 aa13.06□□□□□ -0.32
CLCNKA-206ENST00000491433 MCF2L2Q86YR7 1114 aa13.06□□□□□ -0.32
CLCNKA-206ENST00000491433 DHX37Q8IY37 1157 aaKnown RBP13.06□□□□□ -0.32
CLCNKA-206ENST00000491433 YME1L1Q96TA2 773 aa13.06□□□□□ -0.32
CLCNKA-206ENST00000491433 TMEM47Q9BQJ4 181 aa13.06□□□□□ -0.32
CLCNKA-206ENST00000491433 ALG1Q9BT22 464 aa13.06□□□□□ -0.32
CLCNKA-206ENST00000491433 LMAN2LQ9H0V9 348 aa13.06□□□□□ -0.32
CLCNKA-206ENST00000491433 TOMM22Q9NS69 142 aa13.06□□□□□ -0.32
CLCNKA-206ENST00000491433 RWDD3Q9Y3V2 267 aa13.06□□□□□ -0.32
CLCNKA-206ENST00000491433 FRMPD2Q68DX3 1309 aaPredicted RBP13.06□□□□□ -0.32
CLCNKA-206ENST00000491433 MYH7BA7E2Y1 1941 aa13.05□□□□□ -0.32
CLCNKA-206ENST00000491433 RSPH10B2B2RC85 870 aa13.05□□□□□ -0.32
CLCNKA-206ENST00000491433 F2P00734 622 aa13.05□□□□□ -0.32
CLCNKA-206ENST00000491433 FGRP09769 529 aa13.05□□□□□ -0.32
CLCNKA-206ENST00000491433 RSPH10BP0C881 870 aa13.05□□□□□ -0.32
CLCNKA-206ENST00000491433 PDHBP11177 359 aa13.05□□□□□ -0.32
CLCNKA-206ENST00000491433 COL19A1Q14993 1142 aa13.05□□□□□ -0.32
CLCNKA-206ENST00000491433 KCNV1Q6PIU1 500 aa13.05□□□□□ -0.32
CLCNKA-206ENST00000491433 RASGRP2Q7LDG7 609 aa13.05□□□□□ -0.32
CLCNKA-206ENST00000491433 CHST3Q7LGC8 479 aa13.05□□□□□ -0.32
CLCNKA-206ENST00000491433 TMEM192Q8IY95 271 aa13.05□□□□□ -0.32
CLCNKA-206ENST00000491433 DBF4BQ8NFT6 615 aa13.05□□□□□ -0.32
CLCNKA-206ENST00000491433 PPTC7Q8NI37 304 aa13.05□□□□□ -0.32
CLCNKA-206ENST00000491433 SEPT8Q92599 483 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms