RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 KCNB1Q14721 858 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 ARL6IP4Q66PJ3 421 aaKnown RBP12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 ZNF449Q6P9G9 518 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 ZC3H18Q86VM9 953 aaKnown RBP12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 STAG2Q8N3U4 1231 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 FAM133AQ8N9E0 248 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 SPATA5Q8NB90 893 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 GDAP1Q8TB36 358 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 DCAF5Q96JK2 942 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 DNAJC7Q99615 494 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 KDM4CQ9H3R0 1056 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 HOMER2Q9NSB8 354 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 C15orf41Q9Y2V0 281 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 DEPDC5O75140 1603 aa12.31□□□□□ -0.44
CRNKL1-204ENST00000490910 SART1O43290 800 aaKnown RBP12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 CHN1P15882 459 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 STAT1P42224 750 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 SLC1A4P43007 532 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 DR1Q01658 176 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 PUM3Q15397 648 aaKnown RBP12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 CDC37Q16543 378 aaPredicted RBP12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 STXBP4Q6ZWJ1 553 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 KRT25Q7Z3Z0 450 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 SGMS1Q86VZ5 419 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 MRRFQ96E11 262 aaKnown RBP12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 GGA2Q9UJY4 613 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 MAP2P11137 1827 aaKnown RBP12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 PLEKHG1Q9ULL1 1385 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 ATXN2Q99700 1313 aaKnown RBP12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 CTNNA2P26232 953 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 GUCY1A2P33402 732 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 TNNI2P48788 182 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 AMPD2Q01433 879 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 PPP1R14CQ8TAE6 165 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 AZI2Q9H6S1 392 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 TMBIM4Q9HC24 238 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 FBXO3Q9UK99 471 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 PNMA2Q9UL42 364 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 CAPN6Q9Y6Q1 641 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 THAP12O43422 761 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 RAD51CO43502 376 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 ATP5HO75947 161 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 OR52Z1P0C646 297 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 HSD17B3P37058 310 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 OTUD6AQ7L8S5 288 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 SCYL3Q8IZE3 742 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 BAG2O95816 211 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 TECP42680 631 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 ADCY1Q08828 1119 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 C10orf76Q5T2E6 689 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 SYCP3Q8IZU3 236 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 ERMNQ8TAM6 284 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 TEKT4Q8WW24 435 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 NUDCD1Q96RS6 583 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 PAPOLBQ9NRJ5 636 aaKnown RBP12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 ZFATQ9P243 1243 aa12.3□□□□□ -0.44
CRNKL1-204ENST00000490910 METP08581 1390 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 PASKQ96RG2 1323 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 IGF2BP3O00425 579 aaKnown RBP eCLIP12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 IRS4O14654 1257 aaPredicted RBP12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 PRPF3O43395 683 aaKnown RBP12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 GAS8O95995 478 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 LMNAP02545 664 aaKnown RBP12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 GSTA1P08263 222 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 GHRP10912 638 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 FERP16591 822 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 BMP6P22004 513 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 FKBP3Q00688 224 aaKnown RBP12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 KCNV1Q6PIU1 500 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 ADSSL1Q8N142 457 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 LRRC8CQ8TDW0 803 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 C21orf2O43822 256 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 FGGP02679 453 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 GCP02774 474 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 MSH2P43246 934 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 SARSP49591 514 aaKnown RBP12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 STRN3Q13033 797 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 BICDL1Q6ZP65 573 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 OSCARQ8IYS5 282 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 KIF2BQ8N4N8 673 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 LPIN2Q92539 896 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 ISCUQ9H1K1 167 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 TMOD3Q9NYL9 352 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 AMACRQ9UHK6 382 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 SNX24Q9Y343 169 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 L3MBTL1Q9Y468 752 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 PPRC1Q5VV67 1664 aaKnown RBP12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 NRKQ7Z2Y5 1582 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 MAP3K7O43318 606 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 PAPOLAP51003 745 aaKnown RBP12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 PMS2P54278 862 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 NT5DC1Q5TFE4 455 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 CFAP61Q8NHU2 1237 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 CASKIN2Q8WXE0 1202 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 SH3GL2Q99962 352 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 PITPNM3Q9BZ71 974 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 USP15Q9Y4E8 981 aaPredicted RBP12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 PTPRMP28827 1452 aa12.29□□□□□ -0.44
CRNKL1-204ENST00000490910 NEDD4P46934 1319 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms