RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 NEDD1Q8NHV4 660 aa16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 RPGRIP1Q96KN7 1286 aa16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 C11orf84Q9BUA3 381 aaPredicted RBP16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 IFIH1Q9BYX4 1025 aaKnown RBP16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 PLIN4Q96Q06 1357 aa16.23■□□□□ 0.19
EXOSC3-207ENST00000490516 DMXL1Q9Y485 3027 aa16.22■□□□□ 0.19
EXOSC3-207ENST00000490516 WDR87Q6ZQQ6 2873 aa16.22■□□□□ 0.19
EXOSC3-207ENST00000490516 GH1P01241 217 aa16.22■□□□□ 0.19
EXOSC3-207ENST00000490516 RB1P06400 928 aa16.22■□□□□ 0.19
EXOSC3-207ENST00000490516 IFIT2P09913 472 aaKnown RBP16.22■□□□□ 0.19
EXOSC3-207ENST00000490516 THPOP40225 353 aa16.22■□□□□ 0.19
EXOSC3-207ENST00000490516 CEP85Q6P2H3 762 aa16.22■□□□□ 0.19
EXOSC3-207ENST00000490516 RNF207Q6ZRF8 634 aa16.22■□□□□ 0.19
EXOSC3-207ENST00000490516 CLASRPQ8N2M8 674 aaKnown RBP16.22■□□□□ 0.19
EXOSC3-207ENST00000490516 CLEC4DQ8WXI8 215 aa16.22■□□□□ 0.19
EXOSC3-207ENST00000490516 RANBP17Q9H2T7 1088 aaKnown RBP16.22■□□□□ 0.19
EXOSC3-207ENST00000490516 EPB41L4AQ9HCS5 686 aaPredicted RBP16.22■□□□□ 0.19
EXOSC3-207ENST00000490516 MTMR7Q9Y216 660 aa16.22■□□□□ 0.19
EXOSC3-207ENST00000490516 USP15Q9Y4E8 981 aaPredicted RBP16.22■□□□□ 0.19
EXOSC3-207ENST00000490516 KIAA1671Q9BY89 1806 aa16.22■□□□□ 0.19
EXOSC3-207ENST00000490516 EPG5Q9HCE0 2579 aa16.21■□□□□ 0.19
EXOSC3-207ENST00000490516 ZNF286BP0CG31 522 aa16.21■□□□□ 0.19
EXOSC3-207ENST00000490516 SLC16A2P36021 539 aa16.21■□□□□ 0.19
EXOSC3-207ENST00000490516 NUBP1P53384 320 aa16.21■□□□□ 0.19
EXOSC3-207ENST00000490516 TFAP4Q01664 338 aa16.21■□□□□ 0.19
EXOSC3-207ENST00000490516 CAMK1Q14012 370 aa16.21■□□□□ 0.19
EXOSC3-207ENST00000490516 MFSD10Q14728 455 aa16.21■□□□□ 0.19
EXOSC3-207ENST00000490516 KIAA0753Q2KHM9 967 aa16.21■□□□□ 0.19
EXOSC3-207ENST00000490516 TTBK2Q6IQ55 1244 aa16.21■□□□□ 0.19
EXOSC3-207ENST00000490516 ADGRD2Q7Z7M1 963 aa16.21■□□□□ 0.19
EXOSC3-207ENST00000490516 NKD2Q969F2 451 aaPredicted RBP16.21■□□□□ 0.19
EXOSC3-207ENST00000490516 IL17RAQ96F46 866 aa16.21■□□□□ 0.19
EXOSC3-207ENST00000490516 MPHOSPH6Q99547 160 aaKnown RBP16.21■□□□□ 0.19
EXOSC3-207ENST00000490516 ZNF287Q9HBT7 754 aa16.21■□□□□ 0.19
EXOSC3-207ENST00000490516 DNAH14Q0VDD8 3507 aa16.2■□□□□ 0.18
EXOSC3-207ENST00000490516 ICAM3P32942 547 aa16.2■□□□□ 0.18
EXOSC3-207ENST00000490516 RPS6P62753 249 aaKnown RBP16.2■□□□□ 0.18
EXOSC3-207ENST00000490516 COASYQ13057 564 aa16.2■□□□□ 0.18
EXOSC3-207ENST00000490516 DGKDQ16760 1214 aa16.2■□□□□ 0.18
EXOSC3-207ENST00000490516 PTPN21Q16825 1174 aa16.2■□□□□ 0.18
EXOSC3-207ENST00000490516 GIMAP6Q6P9H5 292 aa16.2■□□□□ 0.18
EXOSC3-207ENST00000490516 SEPT14Q6ZU15 432 aa16.2■□□□□ 0.18
EXOSC3-207ENST00000490516 SEPT8Q92599 483 aa16.2■□□□□ 0.18
EXOSC3-207ENST00000490516 RIPOR3Q96MK2 946 aa16.2■□□□□ 0.18
EXOSC3-207ENST00000490516 HAUS7Q99871 368 aa16.2■□□□□ 0.18
EXOSC3-207ENST00000490516 PHF7Q9BWX1 381 aaPredicted RBP16.2■□□□□ 0.18
EXOSC3-207ENST00000490516 BARX2Q9UMQ3 279 aaPredicted RBP16.2■□□□□ 0.18
EXOSC3-207ENST00000490516 ZNF292O60281 2723 aa16.2■□□□□ 0.18
EXOSC3-207ENST00000490516 HAS3O00219 553 aa16.19■□□□□ 0.18
EXOSC3-207ENST00000490516 MMP1P03956 469 aa16.19■□□□□ 0.18
EXOSC3-207ENST00000490516 TDO2P48775 406 aa16.19■□□□□ 0.18
EXOSC3-207ENST00000490516 DHX37Q8IY37 1157 aaKnown RBP16.19■□□□□ 0.18
EXOSC3-207ENST00000490516 TMEM105Q8N8V8 129 aa16.19■□□□□ 0.18
EXOSC3-207ENST00000490516 DNERQ8NFT8 737 aa16.19■□□□□ 0.18
EXOSC3-207ENST00000490516 STX8Q9UNK0 236 aa16.19■□□□□ 0.18
EXOSC3-207ENST00000490516 MYO10Q9HD67 2058 aa16.18■□□□□ 0.18
EXOSC3-207ENST00000490516 GLP2RO95838 553 aa16.18■□□□□ 0.18
EXOSC3-207ENST00000490516 F2P00734 622 aa16.18■□□□□ 0.18
EXOSC3-207ENST00000490516 ATP5JP18859 108 aa16.18■□□□□ 0.18
EXOSC3-207ENST00000490516 DNAJB1P25685 340 aa16.18■□□□□ 0.18
EXOSC3-207ENST00000490516 CCDC96Q2M329 555 aa16.18■□□□□ 0.18
EXOSC3-207ENST00000490516 ZKSCAN2Q63HK3 967 aa16.18■□□□□ 0.18
EXOSC3-207ENST00000490516 ZSCAN25Q6NSZ9 544 aa16.18■□□□□ 0.18
EXOSC3-207ENST00000490516 SERINC5Q86VE9 423 aa16.18■□□□□ 0.18
EXOSC3-207ENST00000490516 EFHBQ8N7U6 833 aa16.18■□□□□ 0.18
EXOSC3-207ENST00000490516 RMDN1Q96DB5 314 aa16.18■□□□□ 0.18
EXOSC3-207ENST00000490516 KATNAL1Q9BW62 490 aa16.18■□□□□ 0.18
EXOSC3-207ENST00000490516 NMT2O60551 498 aa16.17■□□□□ 0.18
EXOSC3-207ENST00000490516 HSP90AB4PQ58FF6 505 aa16.17■□□□□ 0.18
EXOSC3-207ENST00000490516 RBM23Q86U06 439 aaKnown RBP16.17■□□□□ 0.18
EXOSC3-207ENST00000490516 ITPRIPQ8IWB1 547 aa16.17■□□□□ 0.18
EXOSC3-207ENST00000490516 CLP1Q92989 425 aaKnown RBP16.17■□□□□ 0.18
EXOSC3-207ENST00000490516 OSBP2Q969R2 916 aa16.17■□□□□ 0.18
EXOSC3-207ENST00000490516 CNTNAP3BQ96NU0 1288 aa16.17■□□□□ 0.18
EXOSC3-207ENST00000490516 CNTNAP3Q9BZ76 1288 aa16.17■□□□□ 0.18
EXOSC3-207ENST00000490516 PLAGL2Q9UPG8 496 aa16.17■□□□□ 0.18
EXOSC3-207ENST00000490516 RWDD3Q9Y3V2 267 aa16.17■□□□□ 0.18
EXOSC3-207ENST00000490516 ADGRA3Q8IWK6 1321 aa16.17■□□□□ 0.18
EXOSC3-207ENST00000490516 CACNA1GO43497 2377 aa16.16■□□□□ 0.18
EXOSC3-207ENST00000490516 PLXNA4Q9HCM2 1894 aa16.16■□□□□ 0.18
EXOSC3-207ENST00000490516 NCOR2Q9Y618 2525 aa16.16■□□□□ 0.18
EXOSC3-207ENST00000490516 APPP05067 770 aa16.16■□□□□ 0.18
EXOSC3-207ENST00000490516 CTSHP09668 335 aa16.16■□□□□ 0.18
EXOSC3-207ENST00000490516 NRIP1P48552 1158 aa16.16■□□□□ 0.18
EXOSC3-207ENST00000490516 SYDE2Q5VT97 1194 aa16.16■□□□□ 0.18
EXOSC3-207ENST00000490516 DGLUCYQ7Z3D6 616 aa16.16■□□□□ 0.18
EXOSC3-207ENST00000490516 ZBTB33Q86T24 672 aa16.16■□□□□ 0.18
EXOSC3-207ENST00000490516 KIF1BPQ96EK5 621 aa16.16■□□□□ 0.18
EXOSC3-207ENST00000490516 IL17RBQ9NRM6 502 aa16.16■□□□□ 0.18
EXOSC3-207ENST00000490516 ZNF316A6NFI3 1004 aaPredicted RBP16.15■□□□□ 0.18
EXOSC3-207ENST00000490516 B4DLN1 442 aa16.15■□□□□ 0.18
EXOSC3-207ENST00000490516 MRPL12P52815 198 aaKnown RBP16.15■□□□□ 0.18
EXOSC3-207ENST00000490516 PPP2R3CQ969Q6 453 aa16.15■□□□□ 0.18
EXOSC3-207ENST00000490516 RC3H2Q9HBD1 1191 aaKnown RBP16.15■□□□□ 0.18
EXOSC3-207ENST00000490516 PCDHGC5Q9Y5F6 944 aa16.15■□□□□ 0.18
EXOSC3-207ENST00000490516 FRMPD2Q68DX3 1309 aaPredicted RBP16.15■□□□□ 0.18
EXOSC3-207ENST00000490516 RLBP1P12271 317 aa16.14■□□□□ 0.17
EXOSC3-207ENST00000490516 RBM10P98175 930 aaKnown RBP16.14■□□□□ 0.17
EXOSC3-207ENST00000490516 MCTP2Q6DN12 878 aa16.14■□□□□ 0.17
EXOSC3-207ENST00000490516 BTNL9Q6UXG8 535 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms