RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 ZC3H14Q6PJT7 736 aaKnown RBP8.09□□□□□ -1.11
VPS26A-206ENST00000489794 RPTNQ6XPR3 784 aa8.09□□□□□ -1.11
VPS26A-206ENST00000489794 LRRTM3Q86VH5 581 aa8.09□□□□□ -1.11
VPS26A-206ENST00000489794 FAM177A1Q8N128 213 aaPredicted RBP8.09□□□□□ -1.11
VPS26A-206ENST00000489794 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.09□□□□□ -1.11
VPS26A-206ENST00000489794 TSPAN17Q96FV3 270 aa8.09□□□□□ -1.11
VPS26A-206ENST00000489794 JAM3Q9BX67 310 aa8.09□□□□□ -1.11
VPS26A-206ENST00000489794 EPB41L4BQ9H329 900 aa8.09□□□□□ -1.11
VPS26A-206ENST00000489794 FBLN5Q9UBX5 448 aa8.09□□□□□ -1.11
VPS26A-206ENST00000489794 ZNF652Q9Y2D9 606 aa8.09□□□□□ -1.11
VPS26A-206ENST00000489794 TNPO3Q9Y5L0 923 aaKnown RBP8.09□□□□□ -1.11
VPS26A-206ENST00000489794 NUDT19A8MXV4 375 aa8.08□□□□□ -1.12
VPS26A-206ENST00000489794 SRGAP2CP0DJJ0 459 aa8.08□□□□□ -1.12
VPS26A-206ENST00000489794 SDSP20132 328 aa8.08□□□□□ -1.12
VPS26A-206ENST00000489794 TRIM48Q8IWZ4 208 aa8.08□□□□□ -1.12
VPS26A-206ENST00000489794 DHX37Q8IY37 1157 aaKnown RBP8.08□□□□□ -1.12
VPS26A-206ENST00000489794 KCNJ15Q99712 375 aa8.08□□□□□ -1.12
VPS26A-206ENST00000489794 SMOC1Q9H4F8 434 aa8.08□□□□□ -1.12
VPS26A-206ENST00000489794 CATSPERZQ9NTU4 200 aa8.08□□□□□ -1.12
VPS26A-206ENST00000489794 KLHL14Q9P2G3 628 aa8.08□□□□□ -1.12
VPS26A-206ENST00000489794 PPARGC1AQ9UBK2 798 aaKnown RBP8.08□□□□□ -1.12
VPS26A-206ENST00000489794 CARMIL2Q6F5E8 1435 aa8.08□□□□□ -1.12
VPS26A-206ENST00000489794 CCDC66A2RUB6 948 aa8.07□□□□□ -1.12
VPS26A-206ENST00000489794 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.07□□□□□ -1.12
VPS26A-206ENST00000489794 IRS4O14654 1257 aaPredicted RBP8.07□□□□□ -1.12
VPS26A-206ENST00000489794 GPR19Q15760 415 aa8.07□□□□□ -1.12
VPS26A-206ENST00000489794 C21orf62-AS1Q17RA5 79 aa8.07□□□□□ -1.12
VPS26A-206ENST00000489794 HABP4Q5JVS0 413 aaKnown RBP8.07□□□□□ -1.12
VPS26A-206ENST00000489794 NLGN4XQ8N0W4 816 aa8.07□□□□□ -1.12
VPS26A-206ENST00000489794 DDX1Q92499 740 aaKnown RBP8.07□□□□□ -1.12
VPS26A-206ENST00000489794 LIN37Q96GY3 246 aaPredicted RBP8.07□□□□□ -1.12
VPS26A-206ENST00000489794 DCP1AQ9NPI6 582 aaPredicted RBP8.07□□□□□ -1.12
VPS26A-206ENST00000489794 MAPRE3Q9UPY8 281 aa8.07□□□□□ -1.12
VPS26A-206ENST00000489794 SBNO2Q9Y2G9 1366 aa8.07□□□□□ -1.12
VPS26A-206ENST00000489794 ZC3H12DA2A288 527 aaKnown RBP8.06□□□□□ -1.12
VPS26A-206ENST00000489794 LRRC10BA6NIK2 292 aa8.06□□□□□ -1.12
VPS26A-206ENST00000489794 TADA3O75528 432 aa8.06□□□□□ -1.12
VPS26A-206ENST00000489794 CKMP06732 381 aa8.06□□□□□ -1.12
VPS26A-206ENST00000489794 LACTBP83111 547 aaPredicted RBP8.06□□□□□ -1.12
VPS26A-206ENST00000489794 ARHGAP44Q17R89 818 aa8.06□□□□□ -1.12
VPS26A-206ENST00000489794 PLEKHN1Q494U1 663 aaPredicted RBP8.06□□□□□ -1.12
VPS26A-206ENST00000489794 CFAP100Q494V2 611 aa8.06□□□□□ -1.12
VPS26A-206ENST00000489794 EP400NLQ6ZTU2 488 aa8.06□□□□□ -1.12
VPS26A-206ENST00000489794 ZNF605Q86T29 641 aa8.06□□□□□ -1.12
VPS26A-206ENST00000489794 KIF18BQ86Y91 864 aa8.06□□□□□ -1.12
VPS26A-206ENST00000489794 UHMK1Q8TAS1 419 aaKnown RBP8.06□□□□□ -1.12
VPS26A-206ENST00000489794 ORAI3Q9BRQ5 295 aa8.06□□□□□ -1.12
VPS26A-206ENST00000489794 JMJD7P0C870 316 aa8.05□□□□□ -1.12
VPS26A-206ENST00000489794 PYGMP11217 842 aa8.05□□□□□ -1.12
VPS26A-206ENST00000489794 MYCLP1P12525 358 aaPredicted RBP8.05□□□□□ -1.12
VPS26A-206ENST00000489794 DNM2P50570 870 aa8.05□□□□□ -1.12
VPS26A-206ENST00000489794 PIP4K2CQ8TBX8 421 aa8.05□□□□□ -1.12
VPS26A-206ENST00000489794 WNK4Q96J92 1243 aa8.05□□□□□ -1.12
VPS26A-206ENST00000489794 NSUN3Q9H649 340 aaKnown RBP8.05□□□□□ -1.12
VPS26A-206ENST00000489794 SPC25Q9HBM1 224 aa8.05□□□□□ -1.12
VPS26A-206ENST00000489794 CABP5Q9NP86 173 aa8.05□□□□□ -1.12
VPS26A-206ENST00000489794 SAMD15Q9P1V8 674 aa8.05□□□□□ -1.12
VPS26A-206ENST00000489794 MYOTQ9UBF9 498 aa8.05□□□□□ -1.12
VPS26A-206ENST00000489794 DSEQ9UL01 958 aa8.05□□□□□ -1.12
VPS26A-206ENST00000489794 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.05□□□□□ -1.12
VPS26A-206ENST00000489794 PCDHB4Q9Y5E5 795 aa8.05□□□□□ -1.12
VPS26A-206ENST00000489794 SGSM2O43147 1006 aa8.04□□□□□ -1.12
VPS26A-206ENST00000489794 SEMA7AO75326 666 aa8.04□□□□□ -1.12
VPS26A-206ENST00000489794 KCNA6P17658 529 aa8.04□□□□□ -1.12
VPS26A-206ENST00000489794 SDHBP21912 280 aa8.04□□□□□ -1.12
VPS26A-206ENST00000489794 SOX5P35711 763 aa8.04□□□□□ -1.12
VPS26A-206ENST00000489794 MASP1P48740 699 aa8.04□□□□□ -1.12
VPS26A-206ENST00000489794 NEK4P51957 841 aa8.04□□□□□ -1.12
VPS26A-206ENST00000489794 PRR5P85299 388 aa8.04□□□□□ -1.12
VPS26A-206ENST00000489794 TMEM177Q53S58 311 aa8.04□□□□□ -1.12
VPS26A-206ENST00000489794 CNNM4Q6P4Q7 775 aa8.04□□□□□ -1.12
VPS26A-206ENST00000489794 MILR1Q7Z6M3 343 aa8.04□□□□□ -1.12
VPS26A-206ENST00000489794 IGSF22Q8N9C0 903 aa8.04□□□□□ -1.12
VPS26A-206ENST00000489794 FBXO15Q8NCQ5 510 aaPredicted RBP8.04□□□□□ -1.12
VPS26A-206ENST00000489794 PDGFDQ9GZP0 370 aaPredicted RBP8.04□□□□□ -1.12
VPS26A-206ENST00000489794 NGRNQ9NPE2 291 aaKnown RBP8.04□□□□□ -1.12
VPS26A-206ENST00000489794 SIRT5Q9NXA8 310 aa8.04□□□□□ -1.12
VPS26A-206ENST00000489794 PALD1Q9ULE6 856 aa8.04□□□□□ -1.12
VPS26A-206ENST00000489794 COQ6Q9Y2Z9 468 aa8.04□□□□□ -1.12
VPS26A-206ENST00000489794 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.04□□□□□ -1.12
VPS26A-206ENST00000489794 PDE8AO60658 829 aa8.03□□□□□ -1.12
VPS26A-206ENST00000489794 DNAJC6O75061 913 aa8.03□□□□□ -1.12
VPS26A-206ENST00000489794 PDE6AP16499 860 aa8.03□□□□□ -1.12
VPS26A-206ENST00000489794 NCLP19338 710 aaKnown RBP8.03□□□□□ -1.12
VPS26A-206ENST00000489794 SRSF3P84103 164 aaKnown RBP8.03□□□□□ -1.12
VPS26A-206ENST00000489794 ZNF460Q14592 562 aa8.03□□□□□ -1.12
VPS26A-206ENST00000489794 TARBP2Q15633 366 aaKnown RBP8.03□□□□□ -1.12
VPS26A-206ENST00000489794 MLANAQ16655 118 aa8.03□□□□□ -1.12
VPS26A-206ENST00000489794 FIGNQ5HY92 759 aa8.03□□□□□ -1.12
VPS26A-206ENST00000489794 CDCA2Q69YH5 1023 aaPredicted RBP8.03□□□□□ -1.12
VPS26A-206ENST00000489794 TMEM132EQ6IEE7 984 aa8.03□□□□□ -1.12
VPS26A-206ENST00000489794 ARHGAP36Q6ZRI8 547 aa8.03□□□□□ -1.12
VPS26A-206ENST00000489794 KRT26Q7Z3Y9 468 aa8.03□□□□□ -1.12
VPS26A-206ENST00000489794 TMC6Q7Z403 805 aa8.03□□□□□ -1.12
VPS26A-206ENST00000489794 CHAC2Q8WUX2 184 aa8.03□□□□□ -1.12
VPS26A-206ENST00000489794 DIRC2Q96SL1 478 aa8.03□□□□□ -1.12
VPS26A-206ENST00000489794 TARS2Q9BW92 718 aaKnown RBP8.03□□□□□ -1.12
VPS26A-206ENST00000489794 RNF38Q9H0F5 515 aa8.03□□□□□ -1.12
VPS26A-206ENST00000489794 CAAP1Q9H8G2 361 aa8.03□□□□□ -1.12
VPS26A-206ENST00000489794 A0A087X0B3 334 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms